Search Results for "substitution"
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Showing 15 open source projects for "substitution"
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vash
vash means Visual Assistant Shell, for everyday interaction with unix
Visual Assistant Shell, is yet another visual shell with main idea not hide unix command line from user but increases speed of system responce; Vash runs as a supershell over /bin/sh (bash) providing a set of tools such as command line editor, arguments substitution, parameterized histoty, hotkey scripting, etc. -
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msu
Another way of user substitution on unixoid systems
In large networks it may be necessary to delegate administrative tasks to other users. The administrator has to create a lot of groups and the helpers need to know a lot of passwords. With msu this chaos has it's end. -
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elvis vi
elvis, a vi text editor clone
The original source tarball for Evis version 2.2_0, unmodified, is in Files. README.txt gives tips for compiling on modern compilers (gcc-4.4.5 / linux) and using Xcode for Apple Sierra OS. Elvis is a vi(1) (visual ed) vi editor clone (vim is another clone). "vi" is short for "visual ed(1)" (the 1 means see manpage for ed in section 1 of unix manual pages). vi as a visual editor means typical keyboard editing with ed(1) accessible to do complex editing jobs that developers often... -
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AKtoolbox
Matlab Toolbox for coevolution analysis of multiple sequence alignment
... Square method (OMES), McLanhlan Based Substitution Correlation (MCBASC), Direct-coupling analysis (DCA) and logR. Enclosed in this package is also an archive of different Bioinformatics matrices. -
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corrupt
This program corrupts a unix stream at a specified error rate
...]... [FILE] where: OPTIONS -bit single bit error instead of byte substitution corruption -B NUM_B number of bytes per a single corruption event -kB NUM_KB number of kilobytes per a single corruption event -MB NUM_MB number of megabytes per a single corruption event -u uniform corruption instead of a random statistical event -c CHAR substitute a constant CHAR instead of a random bit/byte error -
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codonPhyML uses Markovian codon models of evolution in phylogeny reconstruction. Given a set of species characterized by their DNA sequences as input, codonPhyML will return the phylogenetic tree that best describes their evolutionary relationship. Our paper describing codonPhyML has been published in the journal "Molecular Biology and Evolution" (MBE). For more details, follow the link: http://mbe.oxfordjournals.org/content/30/6/1270. codonPhyML is on the cover of MBE! Check this out...
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NeedlemanWunsch
Fast global sequence alignment for the masses!
MOVED TO GITHUB: https://github.com/noporpoise/seq-align Global optimal sequence alignment using the Needleman-Wunsch algorithm. Aligns DNA, RNA, protein sequence and more! See our sister project local alignment using Smith-Waterman: http://sourceforge.net/projects/smithwaterman/ -
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SmithWaterman
Fast local sequence alignment for the masses!
MOVED TO GITHUB: https://github.com/noporpoise/seq-align An implementation of the Smith-Waterman local sequence alignment algorithm. See our sister project global alignment using Needleman-Wunsch: http://sourceforge.net/projects/needlemanwunsch/ -
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Alkindus is an automated solver for short monoalphabetic substitution ciphers without word divisions.
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Deliver trusted data with dbtData teams use dbt to codify business logic and make it accessible to the entire organization—for use in reporting, ML modeling, and operational workflows.
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It is a library for parsing standard configuration files which supports extensions over the standard syntax. It also has a very extensive reference substitution system.
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EverCrack cryptanalysis engine. The goal is cryptanalysis of any class of cipher. The focus now is the kernel - cryptanalysis of unilateral monalpha substitution ciphers extremely quickly, and later, cryptanalysis of complex ciphers for the kernel.
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Wsmake is a make tool written in C/C++ for website development and maintenance. It features tag substitution, page ordering, and 'make'-like dependency checking.
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Font substitution module ("hack") for Palm OS. Runs with most of the PalmOS "hack" engines (Hackmaster, EvPlugBase, X-Master). Written in C using PRC-tools
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One-Liner creates one-line paragraphs from CR/LF- or LF-delimited text. Scanners normally return delimited text; substitution of complementary characters such as `` and \'\' for \" in paragraphs becomes easier when the delimiters are removed.
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A project to provide a GUI toolkit to facilitate (and where possible, automate) the breaking of classical (pen-and-paper) cryptosystems. Initial focus is on the cryptanalysis of monoalphabetic substitution ciphers.
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