miRge3 Files

Comprehensive analysis of small RNA sequencing data

Status: Alpha

Brought to you by: halushka-lab

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Name	Modified	Size	InfoDownloads / Week
Parent folder
DE_output	2022-07-01		0
output_dir	2021-06-25		0
unmapped_tmp.zip	2023-01-15	31.6 MB	2
DESmetadata.csv	2022-06-30	170 Bytes	0
SRR772403.fastq.gz	2021-06-25	20.4 MB	2
Totals: 5 Items		52.0 MB	4

miRge3.0

An update to Python package to perform comprehensive analysis of small RNA sequencing data, including miRNA annotation, A-to-I editing, novel miRNA detection, isomiR analysis, visualization through IGV, processing Unique Molecular Identifieres (UMI), tRF detection and producing interactive graphical output.

miRge3.0 is developed in python v3.8 and is a recent update of our previous version miRge2.0. This build includes command line interface (CLI) and cross-platform Graphical User Interface (GUI). For more details refer to documentation link below.

Links

Source: README.rst, updated 2020-10-26

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