Commits · main · Santosh Manicka / ElectricMorphogenesis · GitLab

Mar 06, 2025
- Made provisions for GRNTarget = VmemAndLigand · 653ebc69
  Santosh Manicka authored Mar 06, 2025
  
  653ebc69
Mar 05, 2025
- Included file names with GRN and ligand combined · 05f3175c
  Santosh Manicka authored Mar 05, 2025
  
  05f3175c
- Bug fixes in GRN optimization and made provisions for optimizing ligand simultaneously · ae169481
  Santosh Manicka authored Mar 05, 2025
  
  ae169481
Feb 26, 2025
- Fixed script · 4b657202
  Santosh Manicka authored Feb 26, 2025
  
  4b657202
- Made provisions for toroidal embryos (infinite grid) · 936b1e09
  Santosh Manicka authored Feb 26, 2025
  
  936b1e09
Feb 25, 2025
- Modified loss to assign less weight to dGpol if it's higher in magnitude compared to Vmem · febb6e93
  Santosh Manicka authored Feb 25, 2025
  
  febb6e93
Feb 21, 2025
- REverted loss function to target separate vectors rather a single concatenated vector · 254f711e
  Santosh Manicka authored Feb 21, 2025
  
  254f711e
Feb 20, 2025
- (Re)modified loss to make dGpol comparable to Vmem · bd3751de
  Santosh Manicka authored Feb 20, 2025
  
  bd3751de
- Modified loss function to target a single concatenated vector rather than separate vectors · 3111870c
  Santosh Manicka authored Feb 20, 2025
  
  3111870c
Feb 19, 2025
- Slightly modified globalsumWithdGpol loss to make dGpol and Vmem more comparable · b06f37b9
  Santosh Manicka authored Feb 19, 2025
  
  b06f37b9
Feb 18, 2025
- Modified loss to make dGpol comparable to Vmem · a9b49871
  Santosh Manicka authored Feb 18, 2025
  
  a9b49871
- Made provisions to accommodate dGpol in fitness calculations · 13b8ec8f
  Santosh Manicka authored Feb 18, 2025
  
  13b8ec8f
- Included GRN suffix to results summarizer · a5c6e0fd
  Santosh Manicka authored Feb 18, 2025
  
  a5c6e0fd
- Added 'GRN_' suffix to savefilename · 3e7dd514
  Santosh Manicka authored Feb 18, 2025
  
  3e7dd514
Feb 17, 2025
- Made provisions for learning models with GRNs · 10318232
  Santosh Manicka authored Feb 17, 2025
  
  10318232
Feb 06, 2025
- Minor bug fix · fbb633b9
  Santosh Manicka authored Feb 06, 2025
  
  fbb633b9
- Modified learning program to handle 'None' in ligand gating weight range · 9795fba3
  Santosh Manicka authored Feb 06, 2025
  
  9795fba3
- Modified ligand functionality to modulate field sensitivity rather than ion channel · 53df16ad
  Santosh Manicka authored Feb 06, 2025
  
  53df16ad
Feb 05, 2025
- Slightly modified Vmem-ligand transduction logic · 2dd65f5b
  Santosh Manicka authored Feb 05, 2025
  
  2dd65f5b
Feb 04, 2025
- Merge remote-tracking branch 'origin/main' into main · 4f14ba34
  Santosh Manicka authored Feb 04, 2025
  
  4f14ba34
- Slightly modified Vmem-ligand transduction logic · dd6d90b4
  Santosh Manicka authored Feb 04, 2025
  
  dd6d90b4
Feb 03, 2025
- Added CC Attribution 4.0 International licence · 282d28b1
  Santosh Manicka authored Feb 03, 2025
  
  282d28b1
- Added basic README · 4fb25d48
  Santosh Manicka authored Feb 03, 2025
  
  4fb25d48
- Made provisions for running Stigmergic and Mosaic models with ease · 4adc3ea6
  Santosh Manicka authored Feb 03, 2025
  
  4adc3ea6
Jan 30, 2025
- Updated ranges for field transduction weight and bias · c3e92eff
  Santosh Manicka authored Jan 30, 2025
  
  c3e92eff
- Modified min values for ligand diffusion and Vm->ligand weight · 1d50ccd8
  Santosh Manicka authored Jan 30, 2025
  
  1d50ccd8
- Included clipping for ligandGatingWeight · 96185493
  Santosh Manicka authored Jan 30, 2025
  
  96185493
Jan 29, 2025
- Added ligandGatingWeightRange as an argument to the learning module · 420426e5
  Santosh Manicka authored Jan 29, 2025
  
  420426e5
- Minor bug fix · d1a334f9
  Santosh Manicka authored Jan 29, 2025
  
  d1a334f9
- Added ligandGatingWeightRange as an argument to the learning module · 9bb10a6c
  Santosh Manicka authored Jan 29, 2025
  
  9bb10a6c
- Updated search result summary for ligand models · a31c3813
  Santosh Manicka authored Jan 29, 2025
  
  a31c3813
- Included functionality for handling ligand · 1048c20e
  Santosh Manicka authored Jan 29, 2025
  
  1048c20e
Dec 20, 2024
- Added Timeseries option in analysis module · 41de11e5
  Santosh Manicka authored Dec 20, 2024
  
  41de11e5
Nov 02, 2024
- Minor edits · 39e3e051
  Santosh Manicka authored Nov 02, 2024
  
  39e3e051
- Added CausalStrengthAndDistance in plotting · aa7b683c
  Santosh Manicka authored Nov 02, 2024
  
  aa7b683c
Nov 01, 2024
- Reverted most recent changes · 30954174
  Santosh Manicka authored Nov 02, 2024
  
  30954174
- Minor edits · 3c281529
  Santosh Manicka authored Nov 02, 2024
  
  3c281529
- Minor bug fix · b19d1a6a
  Santosh Manicka authored Nov 02, 2024
  
  b19d1a6a
- Coded threshold logic for sensitivity distance analysis · ac44c617
  Santosh Manicka authored Nov 02, 2024
  
  ac44c617
- Minor edits · f9a023fb
  Santosh Manicka authored Nov 01, 2024
  
  f9a023fb