CN114805507B - Rice OsREIN1T219I protein and its encoding genes and applications - Google Patents
Rice OsREIN1T219I protein and its encoding genes and applications Download PDFInfo
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Abstract
Description
技术领域Technical field
本发明涉及生物技术领域,具体涉及水稻OsREIN1T219I蛋白及其编码基因与应用。The invention relates to the field of biotechnology, specifically to rice OsREIN1 T219I protein and its encoding gene and application.
背景技术Background technique
水稻是最主要的粮食作物之一,水稻的侵染性病害有300余种,常年发生的水稻病害有29种,例如,稻瘟病、白叶枯病、稻纹枯病及近年来逐渐蔓延的稻曲柄、稻黑粉病等,这些病害的发生和流行是影响水稻高产稳产的主要因素,因此水稻抗病相关基因的发掘得到极大关注。Rice is one of the most important food crops. There are more than 300 kinds of invasive diseases of rice, and there are 29 kinds of rice diseases that occur all year round, such as rice blast, bacterial blight, rice sheath blight and the diseases that have gradually spread in recent years. Rice crank, rice smut, etc. The occurrence and prevalence of these diseases are the main factors affecting high and stable rice yields. Therefore, the discovery of rice disease resistance-related genes has received great attention.
等位基因是指在一对同源染色体上,占有相同座位的一对基因,它控制一对相对性状。不同的等位基因会导致一些遗传特征的变化。等位变异(allelic variation) 使人们有可能利用优异等位,培育优良品种。目前已经发展了许多有效的分子生物学技术用于优异等位基因的发掘,例如,SSR标记、自然群体的关联分析等等。利用上述技术已经鉴定了众多与耐逆、抗病、优质和高产等性状相关的优异等位及其载体,广泛应用于培育品种最常用的有效方法杂交育种中。Alleles refer to a pair of genes occupying the same locus on a pair of homologous chromosomes, which control a pair of relative traits. Different alleles cause changes in some genetic characteristics. Allelic variation makes it possible to use excellent alleles to breed superior varieties. Many effective molecular biology techniques have been developed to discover excellent alleles, such as SSR markers, association analysis of natural populations, etc. Many excellent alleles and their carriers related to traits such as stress tolerance, disease resistance, high quality and high yield have been identified using the above technology, and are widely used in cross breeding, the most commonly used and effective method for cultivating varieties.
细胞编程性死亡(Programmed cell death,PCD)是指由基因控制的,细胞主动、有序的死亡,是一种生命现象。PCD普遍存在于植物组织器官分化、生长和发育过程中。其典型的生化特征为细胞收缩、核浓缩、染色质边缘化、DNA被剪切后由膜包成凋亡小体等等。在植物和病原菌互作中,寄主受病原菌侵染的部位经常出现一种形态多样的坏死斑,可以是单细胞死亡,也会有一个较大的坏死区域,成班或条状等。这种坏死现象1915年Stakman命名为超敏反应(hypersensitive response,HR),是植物抗病性的常见反应。目前,HR反应定义为:植物细胞为限制病原菌生长的一种快速死亡。Programmed cell death (PCD) refers to the active and orderly death of cells controlled by genes, and is a life phenomenon. PCD is commonly found in the differentiation, growth and development of plant tissues and organs. Its typical biochemical characteristics include cell shrinkage, nuclear condensation, chromatin marginalization, DNA being sheared and wrapped into apoptotic bodies by membranes, etc. In the interaction between plants and pathogenic bacteria, necrotic spots of various shapes often appear on the host site infected by pathogenic bacteria, which can be single cell death, or there can also be a larger necrotic area, in groups or strips, etc. This necrosis phenomenon was named hypersensitive response (HR) by Stakman in 1915, and it is a common reaction in plant disease resistance. Currently, the HR response is defined as a rapid death of plant cells that limits the growth of pathogenic bacteria.
发明内容Contents of the invention
本发明所要解决的技术问题是如何提高水稻的抗病性或如何培育高抗病性水稻。The technical problem to be solved by the present invention is how to improve the disease resistance of rice or how to cultivate rice with high disease resistance.
为了解决上述技术问题,本发明首先提供了一种蛋白质。所述蛋白质为OsREIN1T219I。所述OsREIN1T219I可为如下A1)、A2)或A3)的蛋白质:In order to solve the above technical problems, the present invention first provides a protein. The protein is OsREIN1 T219I . The OsREIN1 T219I can be the protein of the following A1), A2) or A3):
A1)氨基酸序列是序列表中序列1的蛋白质;A1) The amino acid sequence is the protein of sequence 1 in the sequence listing;
A2)将序列表中序列1所示的氨基酸序列经过一个或几个氨基酸残基的取代和/或缺失和/或添加得到的且具有相同功能的由A1)衍生的或与A1)所示的蛋白质具有80%以上的同一性且具有相同功能的蛋白质;A2) The amino acid sequence shown in Sequence 1 in the sequence listing is obtained by substituting and/or deleting and/or adding one or several amino acid residues and having the same function derived from A1) or represented by A1) Proteins with more than 80% identity and the same function;
A3)在A1)或A2)的N末端或/和C末端连接蛋白标签得到的融合蛋白质。A3) A fusion protein obtained by attaching a protein tag to the N-terminus or/and C-terminus of A1) or A2).
上述A2)中所述的蛋白质也就是将序列表中序列1所示的氨基酸序列除第219位氨基酸为异亮氨酸不变外,其他的氨基酸序列可经过一个或几个氨基酸残基的取代和/ 或缺失和/或添加得到的且具有相同功能的由A1)衍生的或与A1)所示的蛋白质具有 80%以上的同一性且具有相同功能的蛋白质。The protein described in A2) above is the amino acid sequence shown in Sequence 1 in the sequence listing. Except that the 219th amino acid is isoleucine, the other amino acid sequences can be substituted by one or several amino acid residues. and/or deleted and/or added proteins derived from A1) and having the same function or having more than 80% identity with the protein represented by A1) and having the same function.
上述蛋白质中,序列表中序列1由981个氨基酸残基组成。Among the above-mentioned proteins, sequence 1 in the sequence listing consists of 981 amino acid residues.
上述蛋白质可人工合成,也可先合成其编码基因,再进行生物表达得到。The above-mentioned protein can be synthesized artificially, or its encoding gene can be first synthesized and then biologically expressed.
上述蛋白质中,所述蛋白标签(protein-tag)是指利用DNA体外重组技术,与目的蛋白一起融合表达的一种多肽或者蛋白,以便于目的蛋白的表达、检测、示踪和/ 或纯化。所述蛋白标签可为Flag标签、His标签、MBP标签、HA标签、myc标签、GST 标签和/或SUMO标签等。Among the above-mentioned proteins, the protein-tag refers to a polypeptide or protein that is fused and expressed together with the target protein using DNA in vitro recombination technology to facilitate the expression, detection, tracing and/or purification of the target protein. The protein tag may be Flag tag, His tag, MBP tag, HA tag, myc tag, GST tag and/or SUMO tag, etc.
上述蛋白质中,同一性是指氨基酸序列的同一性。可使用国际互联网上的同源性检索站点测定氨基酸序列的同一性,如NCBI主页网站的BLAST网页。例如,可在高级BLAST2.1中,通过使用blastp作为程序,将Expect值设置为10,将所有Filter设置为OFF,使用BLOSUM62作为Matrix,将Gap existence cost,Per residue gap cost 和Lambda ratio分别设置为11,1和0.85(缺省值)并进行检索一对氨基酸序列的同一性进行计算,然后即可获得同一性的值(%)。In the above-mentioned proteins, identity refers to the identity of the amino acid sequence. The identity of the amino acid sequence can be determined using homology search sites on the Internet, such as the BLAST web page of the NCBI homepage. For example, in advanced BLAST2.1, by using blastp as the program, set the Expect value to 10, set all Filters to OFF, use BLOSUM62 as the Matrix, and set the Gap existence cost, Per residue gap cost and Lambda ratio respectively to 11, 1 and 0.85 (default value) and search the identity of a pair of amino acid sequences to calculate, and then the identity value (%) can be obtained.
上述蛋白质中,所述80%以上的同一性可为至少81%、82%、85%、86%、88%、90%、 91%、92%、95%、96%、98%、99%或100%的同一性。In the above-mentioned protein, the identity of more than 80% can be at least 81%, 82%, 85%, 86%, 88%, 90%, 91%, 92%, 95%, 96%, 98%, 99% or 100% identity.
为了解决上述技术问题,本发明还提供了与上述蛋白质相关的生物材料。所述生物材料可为下述B1)至B9)中的任一种:In order to solve the above technical problems, the present invention also provides biological materials related to the above-mentioned proteins. The biological material may be any one of the following B1) to B9):
B1)编码上述蛋白质的核酸分子;B1) Nucleic acid molecules encoding the above-mentioned proteins;
B2)含有B1)所述核酸分子的表达盒;B2) An expression cassette containing the nucleic acid molecule described in B1);
B3)含有B1)所述核酸分子的重组载体、或含有B2)所述表达盒的重组载体;B3) A recombinant vector containing the nucleic acid molecule described in B1), or a recombinant vector containing the expression cassette described in B2);
B4)含有B1)所述核酸分子的重组微生物、或含有B2)所述表达盒的重组微生物、或含有B3)所述重组载体的重组微生物;B4) A recombinant microorganism containing the nucleic acid molecule described in B1), or a recombinant microorganism containing the expression cassette described in B2), or a recombinant microorganism containing the recombinant vector described in B3);
B5)含有B1)所述核酸分子的转基因植物细胞系、或含有B2)所述表达盒的转基因植物细胞系;B5) A transgenic plant cell line containing the nucleic acid molecule described in B1), or a transgenic plant cell line containing the expression cassette described in B2);
B6)含有B1)所述核酸分子的转基因植物组织、或含有B2)所述表达盒的转基因植物组织;B6) Transgenic plant tissue containing the nucleic acid molecule described in B1), or transgenic plant tissue containing the expression cassette described in B2);
B7)含有B1)所述核酸分子的转基因植物器官、或含有B2)所述表达盒的转基因植物器官;B7) Transgenic plant organs containing the nucleic acid molecule described in B1), or transgenic plant organs containing the expression cassette described in B2);
B8)提高或促进权利要求1中所述蛋白质表达的核酸分子;B8) Nucleic acid molecules that increase or promote the expression of the protein described in claim 1;
B9)含有B8)所述核酸分子的表达盒、重组载体、重组微生物或转基因植物细胞系。B9) Expression cassette, recombinant vector, recombinant microorganism or transgenic plant cell line containing the nucleic acid molecule described in B8).
上文所述的生物材料中,B1)所述核酸分子可为如下b1)、b2)或b3)所示的所述蛋白质的编码基因:In the biological material described above, the nucleic acid molecule described in B1) may be the coding gene for the protein shown in b1), b2) or b3) below:
b1)编码序列是序列表中序列2的核苷酸的cDNA分子或DNA分子;b1) A cDNA molecule or DNA molecule whose coding sequence is the nucleotide of sequence 2 in the sequence listing;
b2)核苷酸是序列表中序列2的DNA分子;b2) The nucleotide is the DNA molecule of sequence 2 in the sequence listing;
b3)与b2)限定的cDNA或DNA分子杂交且编码具有相同功能的蛋白质的cDNA分子或DNA分子。b3) A cDNA molecule or DNA molecule that hybridizes to the cDNA or DNA molecule defined in b2) and encodes a protein with the same function.
上述生物材料中,B2)所述的含有核酸分子的表达盒,是指能够在宿主细胞中表达上述应用中所述蛋白质的DNA,该DNA不但可包括启动蛋白编码基因转录的启动子,还可包括终止蛋白编码基因转录的终止子。进一步,所述表达盒还可包括增强子序列。可用于本发明的启动子包括但不限于:组成型启动子,组织、器官和发育特异的启动子,和诱导型启动子。Among the above-mentioned biological materials, the expression cassette containing nucleic acid molecules described in B2) refers to DNA that can express the protein described in the above-mentioned application in a host cell. This DNA can not only include a promoter for initiating the transcription of protein-encoding genes, but also can Includes terminators that terminate the transcription of protein-coding genes. Furthermore, the expression cassette may also include an enhancer sequence. Promoters useful in the present invention include, but are not limited to, constitutive promoters, tissue, organ and development specific promoters, and inducible promoters.
可用现有的植物表达载体构建含有所述蛋白编码基因表达盒的重组表达载体。所述植物表达载体包括双元农杆菌载体和可用于植物微弹轰击的载体等。如pAHC25、pWMB123、pBin438、pCAMBIA1302、pCAMBIA2301、pCAMBIA1301、pCAMBIA1300、pBI121、pCAMBIA1391-Xa或pCAMBIA1391-Xb(CAMBIA公司)等。所述植物表达载体还可包含外源基因的3’端非翻译区域,即包含聚腺苷酸信号和任何其它参与mRNA加工或基因表达的DNA片段。所述聚腺苷酸信号可引导聚腺苷酸加入到mRNA前体的3’端,如农杆菌冠瘿瘤诱导(Ti)质粒基因(如胭脂碱合成酶基因Nos)、植物基因(如大豆贮存蛋白基因)3’端转录的非翻译区均具有类似功能。使用本发明的基因构建植物表达载体时,还可使用增强子,包括翻译增强子或转录增强子,这些增强子区域可以是ATG起始密码子或邻接区域起始密码子等,但必需与编码序列的阅读框相同,以保证整个序列的正确翻译。Existing plant expression vectors can be used to construct a recombinant expression vector containing the protein-encoding gene expression cassette. The plant expression vectors include binary Agrobacterium vectors and vectors that can be used for plant microprojectile bombardment, etc. Such as pAHC25, pWMB123, pBin438, pCAMBIA1302, pCAMBIA2301, pCAMBIA1301, pCAMBIA1300, pBI121, pCAMBIA1391-Xa or pCAMBIA1391-Xb (CAMBIA Company), etc. The plant expression vector may also contain the 3' untranslated region of the foreign gene, that is, containing the poly(A) signal and any other DNA fragments involved in mRNA processing or gene expression. The poly(A) signal can guide poly(A) to be added to the 3' end of the mRNA precursor, such as the Agrobacterium crown gall tumor induction (Ti) plasmid gene (such as nopaline synthase gene Nos), plant genes (such as soybean The untranslated regions transcribed at the 3' end of storage protein genes all have similar functions. When using the gene of the present invention to construct a plant expression vector, enhancers can also be used, including translation enhancers or transcription enhancers. These enhancer regions can be ATG start codons or adjacent region start codons, etc., but they must be the same as the coding The reading frames of the sequences are identical to ensure correct translation of the entire sequence.
上述生物材料中,所述重组微生物具体可为酵母,细菌,藻和真菌。Among the above biological materials, the recombinant microorganisms can specifically be yeast, bacteria, algae and fungi.
上文所述蛋白质和/或上文所述生物材料的下述任一种应用也属于本发明的保护范围:Any of the following applications of the above-mentioned proteins and/or the above-mentioned biological materials also fall within the protection scope of the present invention:
Q1、所述蛋白质和/或所述生物材料在调控植物抗病性中的应用,Q1. Application of the protein and/or the biological material in regulating plant disease resistance,
Q2、所述蛋白质和/或所述生物材料在制备提高植物抗病性的产品中的应用,Q2. Application of the protein and/or the biological material in preparing products that improve plant disease resistance,
Q3、所述蛋白质和/或所述生物材料在培育抗病性植物中的应用,Q3. Application of the protein and/or the biological material in cultivating disease-resistant plants,
Q4、所述蛋白质和/或所述生物材料在制备植物抗病性产品中的应用,Q4. Application of the protein and/or the biological material in preparing plant disease resistance products,
Q5、所述蛋白质和/或所述生物材料在植物育种中的应用。Q5. Application of the protein and/or the biological material in plant breeding.
为了解决上述技术问题,本发明还提供了一种培育抗病植物的方法。所述方法包括提高目的植物中上文所述蛋白质的活性或/和上文所述蛋白质的编码基因的表达量,得到抗病植物。所述抗病植物的抗病性高于所述目的植物的抗病性。In order to solve the above technical problems, the present invention also provides a method for cultivating disease-resistant plants. The method includes improving the activity of the above-mentioned protein or/and the expression level of the gene encoding the above-mentioned protein in the target plant to obtain a disease-resistant plant. The disease resistance of the disease-resistant plant is higher than the disease resistance of the target plant.
所述提高目的植物中上文所述蛋白质的活性或/和上文所述蛋白质的编码基因的表达量是通过将上文所述蛋白质的编码基因导入所述目的植物实现的。The improvement of the activity of the above-mentioned protein or/and the expression level of the above-mentioned protein coding gene in the target plant is achieved by introducing the above-mentioned protein coding gene into the target plant.
上述方法中,所述蛋白的编码基因可先进行如下修饰,再导入目的植物中,以达到更好的表达效果:In the above method, the gene encoding the protein can be modified as follows first, and then introduced into the target plant to achieve better expression effects:
1)与各种植物表达的启动子连接,以利于其在植物中的表达;所述启动子可包括组成型、诱导型、时序调节、发育调节、化学调节、组织优选和组织特异性启动子;启动子的选择将随着表达时间和空间需要而变化,而且也取决于靶物种;例如组织或器官的特异性表达启动子,根据需要受体在发育的什么时期而定;尽管证明了来源于双子叶植物的许多启动子在单子叶植物中是可起作用的,反之亦然,但是理想地,选择双子叶植物启动子用于双子叶植物中的表达,单子叶植物的启动子用于单子叶植物中的表达;1) Connect to promoters expressed in various plants to facilitate their expression in plants; the promoters may include constitutive, inducible, temporal regulation, developmental regulation, chemical regulation, tissue-preferred and tissue-specific promoters ;The choice of promoter will vary with the temporal and spatial requirements for expression, and will also depend on the target species; e.g. tissue or organ specific expression promoters, depending on at what stage of development the receptor is required; although proven sources Many promoters for dicots will work in monocots and vice versa, but ideally, a dicot promoter is selected for expression in dicots and a monocot promoter for Expression in monocots;
2)与适合的转录终止子连接,也可以提高本发明基因的表达效率;例如来源于CaMV的tml,来源于rbcS的E9;任何已知在植物中起作用的可得到的终止子都可以与本发明基因进行连接;2) Connecting with a suitable transcription terminator can also improve the expression efficiency of the gene of the invention; for example, tml derived from CaMV, E9 derived from rbcS; any available terminator known to work in plants can be combined with The genes of the present invention are connected;
3)引入增强子序列,如内含子序列(例如来源于Adhl和bronzel)和病毒前导序列(例如来源于TMV,MCMV和AMV)。3) Introducing enhancer sequences, such as intron sequences (eg derived from Adhl and bronzel) and viral leader sequences (eg derived from TMV, MCMV and AMV).
上述方法中,所述对逆境胁迫敏感植物可为转基因植物,也可为通过杂交等常规育种技术获得的植物。In the above method, the plants sensitive to stress may be transgenic plants or plants obtained through conventional breeding techniques such as hybridization.
上述方法中,所述转基因植物理解为不仅包含第一代到第二代转基因植物,也包括其子代。对于转基因植物,可以在该物种中繁殖该基因,也可用常规育种技术将该基因转移进入相同物种的其它品种,特别包括商业品种中。所述转基因植物包括种子、愈伤组织、完整植株和细胞。In the above method, the transgenic plants are understood to include not only the first to second generation transgenic plants, but also their progeny. In the case of transgenic plants, the gene can be propagated in the species or transferred into other varieties of the same species, especially commercial varieties, using conventional breeding techniques. The transgenic plants include seeds, calli, intact plants and cells.
上文所述植物或/和目的植物可为下述任一种:The plants and/or target plants mentioned above can be any of the following:
C1)双子叶植物;C1) Dicotyledonous plants;
D1)单子叶植物;D1) Monocotyledonous plants;
D3)禾本目植物;D3) Gramineae plants;
D4)禾本科植物;D4) Gramineae;
D5)稻属植物;D5) Oryza plants;
D6)水稻。D6) Rice.
上文所述抗病可为抗稻瘟病。The disease resistance mentioned above may be resistance to rice blast.
检测水稻基因组中SNP1的多态性或基因型的物质的下述任一种应用也属于本发明的保护范围:Any of the following applications of substances for detecting polymorphisms or genotypes of SNP1 in the rice genome also fall within the protection scope of the present invention:
F1、在鉴定或辅助鉴定水稻抗病性中的应用;F1. Application in identifying or assisting in identifying rice disease resistance;
F2、在制备鉴定或辅助鉴定水稻抗病性产品中的应用;F2. Application in preparing or assisting in the identification of rice disease resistance products;
F3、在检测或辅助检测水稻抗病性中的应用;F3. Application in detecting or assisting in detecting rice disease resistance;
F4、在制备检测或辅助检测水稻抗病性产品中的应用;F4. Application in preparing products for testing or assisting in testing rice disease resistance;
F6、在水稻抗病育种中的应用;F6. Application in rice disease resistance breeding;
所述SNP1是水稻基因组的一个SNP位点,对应于序列表中序列2的第656位核苷酸,其可为T或C。SNP 1位点有三种基因型,即CC、TT或CT。基因型TT是SNP1位点为T的纯合型,基因型CC是位点为C的纯合型,基因型CT是SNP1位点为C和T的杂合型。The SNP1 is a SNP site in the rice genome, corresponding to the 656th nucleotide of Sequence 2 in the sequence listing, which can be T or C. There are three genotypes at the SNP 1 locus, namely CC, TT or CT. Genotype TT is the homozygous type with T at the SNP1 locus, genotype CC is the homozygous type with the C locus, and genotype CT is the heterozygous type with SNP1 loci at C and T.
所述SNP分子标记位点的基因型为基因型TT的水稻的抗病性高于或候选高于所述SNP分子标记位点的基因型为基因型CC的水稻。The disease resistance of rice whose genotype is genotype TT at the SNP molecular marker site is higher or can be higher than that of rice whose genotype is genotype CC at the SNP molecular marker site.
所述水稻抗病可为水稻抗稻瘟病。The rice disease resistance may be rice blast resistance.
本申请从1500余份水稻资源中筛选、获得乙烯突变体,其中来自越南的Tang10 编号为MC41的材料对稻瘟病有明显抗性。应用图位克隆获得目的基因,为NBS-LRR 家族成员REIN1,该基因的突变基因OsREIN1T219I可激发超敏反应,增加了水稻的抗病性。本发明的实验证明,OsREIN1T219I蛋白具有提高水稻抗病能力的功能。导入 OsREIN1T219I基因的烟草可引起超敏反应,而同样条件下导入OsREIN1基因和GFP基因的烟草并不能引起超敏反应。OsREIN1T219I蛋白及其编码基因对培育抗病水稻品种具有重要意义。This application screened and obtained ethylene mutants from more than 1,500 rice resources. Among them, Tang10 from Vietnam, numbered MC41, has obvious resistance to rice blast. The target gene was obtained using map-based cloning, which is REIN1, a member of the NBS-LRR family. The mutant gene OsREIN1 T219I of this gene can stimulate a hypersensitive response and increase the disease resistance of rice. Experiments of the present invention prove that OsREIN1 T219I protein has the function of improving rice disease resistance. Tobacco introduced with the OsREIN1 T219I gene can cause hypersensitivity reactions, but under the same conditions, tobacco introduced with the OsREIN1 gene and GFP gene cannot cause hypersensitivity reactions. OsREIN1 T219I protein and its encoding gene are of great significance for breeding disease-resistant rice varieties.
附图说明Description of drawings
图1为MC41的乙烯不敏感表型由隐性突变所致。Air表示未进行乙烯处理,Ethylene表示进行乙烯处理。Figure 1 shows that the ethylene-insensitive phenotype of MC41 is caused by a recessive mutation. Air means no ethylene treatment, and Ethylene means ethylene treatment.
图2为水稻REIN1T219I的图位克隆。Figure 2 shows the map-based cloning of rice REIN1 T219I .
图3为OsREIN1T219I可激发超敏反应。Figure 3 shows that OsREIN1 T219I can stimulate hypersensitivity reactions.
图4为纯合OsREIN1T219I增加水稻对稻瘟病的抗性。Figure 4 shows that homozygous OsREIN1 T219I increases rice resistance to rice blast.
图5为pCAMBIA2300载体经改造后得到的pCAMBIA2300-35S-OCS载体示意图。Figure 5 is a schematic diagram of the pCAMBIA2300-35S-OCS vector obtained after modification of the pCAMBIA2300 vector.
具体实施方式Detailed ways
下面结合具体实施方式对本发明进行进一步的详细描述,给出的实施例仅为了阐明本发明,而不是为了限制本发明的范围。以下提供的实施例可作为本技术领域普通技术人员进行进一步改进的指南,并不以任何方式构成对本发明的限制。The present invention will be described in further detail below in conjunction with specific embodiments. The examples given are only for illustrating the present invention and are not intended to limit the scope of the present invention. The examples provided below can serve as a guide for those of ordinary skill in the art to make further improvements and do not constitute a limitation of the present invention in any way.
下述实施例中的实验方法,如无特殊说明,均为常规方法,按照本领域内的文献所描述的技术或条件或者按照产品说明书进行。下述实施例中所用的材料、试剂等,如无特殊说明,均可从商业途径得到。The experimental methods in the following examples, unless otherwise specified, are all conventional methods and are carried out in accordance with the techniques or conditions described in literature in the field or in accordance with product instructions. Materials, reagents, etc. used in the following examples can all be obtained from commercial sources unless otherwise specified.
水稻品种日本晴(O.Sativa L.spp.japonica,var nipponbare,AA genome,Nip)属粳亚种,记载于如下文献:傅秀林等,水稻品种日本晴,农业科技通讯,1973,2,11-15;由中国科学院遗传与发育生物学研究所朱立煌提供。水稻品种Tang 10(Oryza sativaL.Indica,Tang 10),编号为MC41(来自越南)和明恢63(MH63)(Oryza sativa L.MH63)由中国科学院遗传与发育生物学研究所储成才研究员提供。The rice variety Nipponbare (O.Sativa L.spp.japonica, var nipponbare, AA genome, Nip) belongs to the japonica subspecies and is recorded in the following documents: Fu Xiulin et al., Rice variety Nipponbare, Agricultural Science and Technology Communications, 1973, 2, 11-15; Provided by Zhu Lihuang, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences. Rice varieties Tang 10 (Oryza sativa L. Indica, Tang 10), numbered MC41 (from Vietnam) and Minghui 63 (MH63) (Oryza sativa L.MH63) were provided by researcher Chu Chengcai from the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences.
植物双元表达载体pCAMBIA2300:购自酶研生物,货号MY1383。Julie Leclercq etal.,Development of a new pCAMBIA binary vector using technology,Plasmid.2015Sep;81:50-4。Plant binary expression vector pCAMBIA2300: purchased from Enzyme Biotechnology, product number MY1383. Julie Leclercq etal.,Development of a new pCAMBIA binary vector using technology,Plasmid.2015Sep;81:50-4.
同源重组试剂盒:美国Clone Smarter品牌的Seamless Assembly Cloning Kit,货号为C5891-50,国内由中美泰和生物技术有限公司代理。Homologous recombination kit: American Clone Smarter brand Seamless Assembly Cloning Kit, product number is C5891-50, domestically distributed by Sino-American Taihe Biotechnology Co., Ltd.
稻瘟菌Guy11:由中国科学院微生物研究所刘俊提供。S Fukiya et al.,Establishment of a new cross of the rice blast fungus derived from Japanesedifferential strain Ina168 and hermaphroditic rice pathogen Guy11,BiosciBiotechnol Biochem.2001Jul;65(7):1464-73.Magnaporthe oryzae Guy11: provided by Liu Jun, Institute of Microbiology, Chinese Academy of Sciences. S Fukiya et al., Establishment of a new cross of the rice blast fungus derived from Japanese differential strain Ina168 and hermaphroditic rice pathogen Guy11, BiosciBiotechnol Biochem. 2001Jul;65(7):1464-73.
实施例1、水稻乙烯反应缺陷材料的筛选和遗传分析Example 1. Screening and genetic analysis of rice materials with defective ethylene response
在筛选1500份水稻资源中乙烯反应缺陷材料的过程中,发现Tang10,编号为MC41的材料,其黄化苗在乙烯处理时与对照日本晴(Oryza sativa L.cv.Nipponbare,Nip) 比较,其根长没有变短的乙烯反应,并且将MC41与Nip杂交,获得的F1代,其乙烯反应与Nip相似,即,在乙烯处理下,其根长明显变短(图1)。因此推测MC41乙烯反应异常的性状可能由隐性单基因决定。In the process of screening 1,500 rice resources for ethylene-reactive deficient materials, it was found that Tang10, a material numbered MC41, had yellow seedlings when treated with ethylene compared with the control Nipponbare (Oryza sativa L.cv. Nipponbare, Nip). The ethylene response of the F1 generation was similar to that of Nip, that is, its root length was significantly shorter under ethylene treatment (Figure 1). Therefore, it is speculated that the abnormal ethylene response trait of MC41 may be determined by a recessive single gene.
对MC41的乙烯反应异常变异的显隐性做进一步分析。以MC41为母本与MH63作为父本杂交,MH63与Nip有同样正常的乙烯反应。F1代黄化苗为MH63相同表型,表明 MC41的乙烯异常反应为隐性突变。F2代黄化苗表型分析发现为3:1(MH63表型:MC41 表型)分离,且符合χ2检验(表1)。以上结果表明,MC41的变异是由单基因控制的隐性突变。Further analysis will be conducted on the apparent and recessive nature of the abnormal variation in ethylene response of MC41. When MC41 was used as the female parent and MH63 was used as the male parent, MH63 had the same normal ethylene response as Nip. The F1 generation etiolated seedlings had the same phenotype as MH63, indicating that the abnormal ethylene response of MC41 was a recessive mutation. Phenotypic analysis of the F2 generation etiolated seedlings found a 3:1 (MH63 phenotype: MC41 phenotype) separation, which was consistent with the χ 2 test (Table 1). The above results indicate that the variation of MC41 is a recessive mutation controlled by a single gene.
表1 MC41乙烯反应异常表型的显隐性分析Table 1 Explicit and recessive analysis of MC41 abnormal ethylene response phenotypes
注:“+”为MC41乙烯不敏感表型;“-”为MH63正常乙烯敏感表型;critical value(0.05, 1)=3.84.Note: “+” means MC41 ethylene-insensitive phenotype; “-” means MH63 normal ethylene-sensitive phenotype; critical value (0.05, 1)=3.84.
实施例2、MC41变异等位基因的鉴定Example 2. Identification of MC41 variant alleles
通过图位克隆将MC41变异位点确定在7号染色体长臂上的一个73k的区间里,并在其中的一个基因上鉴定到了一个位于水稻基因LOC_Os07g40810的特异SNP(命名为SNP1)可导致氨基酸的非同义替换,将该基因列为候选基因。该基因编码蛋白为 NBS-LRR家族成员REIN1,该基因命名为OsREIN1基因。按照水稻基因组参考基因序列,设计引物:The MC41 mutation site was determined in a 73k interval on the long arm of chromosome 7 through map-based cloning, and a specific SNP (named SNP1) located in the rice gene LOC_Os07g40810 was identified on one of the genes, which can lead to amino acid variation. Non-synonymous substitutions list the gene as a candidate gene. The protein encoded by this gene is REIN1, a member of the NBS-LRR family, and the gene is named OsREIN1 gene. Design primers according to the rice genome reference gene sequence:
REIN1F:5’-ATGGAACATGCTGTTGTTAGTGC-3’REIN1F: 5’-ATGGAACATGCTGTTGTTAGTGC-3’
REIN1R:5’-TCAGTCTTCGTCGAAAGATGAAGATAGT-3’REIN1R: 5’-TCAGTCTTCGTCGAAAGATGAAGATAGT-3’
以MC41总mRNA为模板,由上述引物扩增获得约3Kb DNA条带。经测序后确认其为属于NBS-LRR家族的REIN1基因,但与水稻基因组参考序列中LOC_Os07g40810的序列有差异,MC41中OsREIN1发生了单个碱基的变化,即位于NB-ARC结构域 P-loop(ATP/ADP binding)中第656位碱基由C突变为T(C656T),使其编码蛋白 OsREIN1中219位单个氨基酸发生改变,由苏氨酸突变为异亮氨酸(T219I)(图2)。因此,将水稻MC41中该突变后的蛋白命名为OsREIN1T219I,OsREIN1T219I蛋白的氨基酸序列为序列表中的序列1的所示。编码OsREIN1T219I蛋白的基因(OsREIN1T219I)的编码链的CDS序列为序列表中的序列2所示的DNA分子。在MC41的OsREIN1T219I基因中SNP1 特异突变位点(序列表中序列2的第656位)的核苷酸为T,对应OsREIN1T219I蛋白的该位点的氨基酸(序列表中序列1的第219位)为异亮氨酸(I)。Using MC41 total mRNA as a template, a DNA band of approximately 3Kb was obtained by amplification with the above primers. After sequencing, it was confirmed that it is the REIN1 gene belonging to the NBS-LRR family, but it is different from the sequence of LOC_Os07g40810 in the rice genome reference sequence. OsREIN1 in MC41 has a single base change, which is located in the NB-ARC domain P-loop ( The base at position 656 in ATP/ADP binding was mutated from C to T (C656T), causing a single amino acid change at position 219 in the encoded protein OsREIN1, from threonine to isoleucine (T219I) (Figure 2) . Therefore, the mutated protein in rice MC41 was named OsREIN1 T219I , and the amino acid sequence of the OsREIN1 T219I protein is as shown in Sequence 1 in the sequence listing. The CDS sequence of the coding chain of the gene encoding OsREIN1 T219I protein (OsREIN1 T219I ) is the DNA molecule shown in Sequence 2 in the sequence listing. In the OsREIN1 T219I gene of MC41, the nucleotide of the SNP1-specific mutation site (position 656 of sequence 2 in the sequence listing) is T, which corresponds to the amino acid at this site of the OsREIN1 T219I protein (position 219 of sequence 1 in the sequence listing). ) is isoleucine (I).
在水稻MH63与Nip中,该SNP1位点的核苷酸为C(对应于序列表中序列2的第 656位),对应的氨基酸为苏氨酸(T)(对应于序列表中序列1的第219位)。因此,在水稻基因组中,该SNP1位点的核苷酸为C或T,对应的氨基酸为苏氨酸(T)或异亮氨酸(I);该位点有三种基因型,即CC、TT或CT,基因型TT是SNP1位点为T的纯合型,基因型CC是位点为C的纯合型,基因型CT是SNP1位点为C和T的杂合型。In rice MH63 and Nip, the nucleotide of the SNP1 site is C (corresponding to position 656 of sequence 2 in the sequence listing), and the corresponding amino acid is threonine (T) (corresponding to position 656 of sequence 1 in the sequence listing). No. 219). Therefore, in the rice genome, the nucleotide of the SNP1 site is C or T, and the corresponding amino acid is threonine (T) or isoleucine (I); there are three genotypes of this site, namely CC, TT or CT, the genotype TT is the homozygous type with T at the SNP1 locus, the genotype CC is the homozygous type with the C locus, and the genotype CT is the heterozygous type with the SNP1 locus at C and T.
接着,在5518份水稻材料中检测了OsREIN1的等位基因,发现只有MC41中OsREIN1基因有该SNP1位点的点突变,因此这一突变为稀有突变。Next, the alleles of OsREIN1 were detected in 5518 rice materials, and it was found that only the OsREIN1 gene in MC41 had a point mutation at the SNP1 site, so this mutation was a rare mutation.
实施例3、OsREIN1T219I参与抗病性调控Example 3. OsREIN1 T219I is involved in the regulation of disease resistance
HR(超敏反应)细胞死亡对病原菌获取养分起阻隔作用,限制病原菌生长和繁衍,同时可激发邻近组织的特异性防御反应和植株的系统获得抗性(systematic acquiredresistance,SAR)。因此超敏反应对植物的抗病性起重要作用。HR (hypersensitivity response) cell death blocks pathogenic bacteria from acquiring nutrients and limits the growth and reproduction of pathogenic bacteria. It can also stimulate specific defense responses in adjacent tissues and systemic acquired resistance (SAR) of plants. Hypersensitivity therefore plays an important role in plant disease resistance.
在烟草系统中检测OsREIN1T219I是否能启动植物的超敏反应。具体实验步骤如下:Testing whether OsREIN1 T219I can initiate plant hypersensitivity responses in the tobacco system. The specific experimental steps are as follows:
1.超敏反应载体构建:1. Construction of hypersensitive reaction vector:
1)使用下列引物,分别以Nip和MC41的cDNA为模板,通过PCR扩增出目的片段:1) Use the following primers and use the cDNA of Nip and MC41 as templates to amplify the target fragment through PCR:
F:5’-TGGAGAGGACAGGGTACCCGGATGGAACATGCTGTTGTTAGTGC-3’F:5’-TGGAGAGGACAGGGTACCCGGATGGAACATGCTGTTGTTAGTGC-3’
(划线部分序列为同源重组臂序列,粗体部分序列为3xMYC标签序列)(The underlined sequence is the homologous recombination arm sequence, and the bolded sequence is the 3xMYC tag sequence)
2)将植物表达载体pCAMBIA2300进行改造:在NcoI和KpnI酶切位点之间插入 35S启动子序列(序列表中序列3),在PstI和HindⅢ之间插入了OCS终止子序列 (序列表中序列4)得到改造后的载体pCAMBIA2300-35S-OCS(图5);然后用BamHI 酶切pCAMBIA2300-35S-OCS载体,回收得到线性化载体。2) Transform the plant expression vector pCAMBIA2300: insert the 35S promoter sequence (sequence 3 in the sequence listing) between the NcoI and KpnI restriction sites, and insert the OCS terminator sequence (sequence in the sequence listing) between PstI and HindIII. 4) Obtain the modified vector pCAMBIA2300-35S-OCS (Figure 5); then use BamHI to digest the pCAMBIA2300-35S-OCS vector and recover the linearized vector.
3)将步骤1)中的以Nip为模板的PCR回收产物和以MC41为模板的PCR回收产物,分别与步骤2)中得到的线性化载体通过同源重组试剂盒进行混合连接,分别构建得到重组载体pCAMBIA2300-REIN1和pCAMBIA2300-REIN1T219I。其中, pCAMBIA2300-REIN1是来源于Nip的OsREIN1基因与线性化载体连接的重组载体,表达OsREIN1蛋白(OsREIN1蛋白是将序列表中的序列1的第219位I替换为T,保持序列1的其它氨基酸残基不变得到的蛋白质);pCAMBIA2300-REIN1T219I是来源于MC41的 OsREIN1T219I基因与线性化载体连接的重组载体,表达氨基酸序列为序列表中的序列1 的OsREIN1T219I蛋白。3) Mix and ligate the PCR recovery product with Nip as the template and the PCR recovery product with MC41 as the template in step 1) with the linearized vector obtained in step 2) using a homologous recombination kit to construct respectively Recombinant vectors pCAMBIA2300-REIN1 and pCAMBIA2300-REIN1 T219I . Among them, pCAMBIA2300-REIN1 is a recombinant vector that connects the OsREIN1 gene derived from Nip to a linearized vector to express the OsREIN1 protein (the OsREIN1 protein replaces I with T at position 219 of sequence 1 in the sequence list and maintains the other amino acids of sequence 1 Protein obtained with unchanged residues); pCAMBIA2300-REIN1 T219I is a recombinant vector that connects the OsREIN1 T219I gene derived from MC41 to a linearized vector, and expresses the OsREIN1 T219I protein whose amino acid sequence is sequence 1 in the sequence list.
4)将步骤3)中构建得到的两种重组载体pCAMBIA2300-REIN1和 pCAMBIA2300-REIN1T219I分别单独转化至E.coli.DH5α感受态细胞,铺至含50μl/ml 卡那霉素的固体LB培养基中,过夜培养。4) Transform the two recombinant vectors pCAMBIA2300-REIN1 and pCAMBIA2300-REIN1 T219I constructed in step 3) individually into E.coli.DH5α competent cells, and spread them into solid LB medium containing 50 μl/ml kanamycin. Medium, incubate overnight.
5)挑取固体培养基上生长出的单克隆进行菌落PCR鉴定,阳性重组菌菌落提取质粒并测序验证得到pCAMBIA2300-REIN1重组质粒和pCAMBIA2300-REIN1219I重组质粒后进行下一步实验。5) Pick the single clones grown on the solid medium for colony PCR identification. Extract the plasmids from the positive recombinant colonies and sequence them to verify that the pCAMBIA2300-REIN1 recombinant plasmid and pCAMBIA2300-REIN1 219I recombinant plasmid are obtained before proceeding to the next experiment.
参照上述载体构建方法构建GFP基因的重组载体pCAMBIA2300-GFP,用作对照进行后续实验。pCAMBIA2300-GFP与pCAMBIA2300-REIN1T219I的区别仅在于将 pCAMBIA2300-REIN1T219I中的OsREIN1T219I基因替换为GFP基因,其它核苷酸相同。The recombinant vector pCAMBIA2300-GFP of the GFP gene was constructed according to the above vector construction method and used as a control for subsequent experiments. The only difference between pCAMBIA2300-GFP and pCAMBIA2300-REIN1 T219I is that the OsREIN1 T219I gene in pCAMBIA2300-REIN1 T219I is replaced by the GFP gene, and other nucleotides are the same.
2.HR反应检测:2.HR response detection:
1)本氏烟草(Nicotiana benthamiana)在14h光照/10h黑暗,温度25℃,相对湿度70%条件下培养约4周。1) Nicotiana benthamiana was cultured for about 4 weeks under the conditions of 14 hours of light/10 hours of darkness, a temperature of 25°C, and a relative humidity of 70%.
2)将上述1中得到的pCAMBIA2300-REIN1、pCAMBIA2300-REIN1T219I及GFP对照重组载体pCAMBIA2300-GFP分别转入农杆菌EHA105中,分别得到重组农杆菌 EHA105/pCAMBIA2300-REIN1、EHA105/pCAMBIA2300-REIN1219I和 EHA105/pCAMBIA2300-GFP。2) Transfer the pCAMBIA2300-REIN1, pCAMBIA2300-REIN1 T219I and GFP control recombinant vector pCAMBIA2300-GFP obtained in the above 1 into Agrobacterium EHA105 to obtain recombinant Agrobacterium EHA105/pCAMBIA2300-REIN1, EHA105/pCAMBIA2300-REIN1 219I and EHA105/pCAMBIA2300-GFP.
3)分别挑取重组农杆菌EHA105/pCAMBIA2300-REIN1、 EHA105/pCAMBIA2300-REIN1219I和EHA105/pCAMBIA2300-GFP这三种重组农杆菌的单克隆培养、扩增。收集菌体,用侵染液(含10mM MgCl2,10mM MES,150μM乙酰丁香酮,其余为水,pH=5.6)悬浮重组农杆菌菌体得到重组农杆菌 EHA105/pCAMBIA2300-REIN1侵染液、重组农杆菌EHA105/pCAMBIA2300-REIN1219I侵染液和重组农杆菌EHA105/pCAMBIA2300-GFP侵染液这三种重组农杆菌侵染液,每种重组农杆菌侵染液的OD600nm=1.0(以侵染液为空白对照)。室温静止2~3h(至少0.5 h,至多不超过3h。)3) Select three types of recombinant Agrobacterium EHA105/pCAMBIA2300-REIN1, EHA105/pCAMBIA2300-REIN1 219I and EHA105/pCAMBIA2300-GFP for monoclonal culture and amplification. Collect the bacterial cells, and suspend the recombinant Agrobacterium cells in an infection solution (containing 10mM MgCl 2 , 10mM MES, 150 μM acetosyringone, and the rest is water, pH=5.6) to obtain the recombinant Agrobacterium EHA105/pCAMBIA2300-REIN1 infection solution, recombinant Agrobacterium EHA105/pCAMBIA2300-REIN1 219I infection solution and recombinant Agrobacterium EHA105/pCAMBIA2300-GFP infection solution. The OD 600nm of each recombinant Agrobacterium infection solution is 1.0 (based on infection liquid is a blank control). Rest at room temperature for 2 to 3 hours (at least 0.5 h, no more than 3 hours.)
4)将各种重组农杆菌侵染液单独或按不同的比例混合,并用1mL注射器在烟草背面注射,用记号笔标记烟草叶片水渍状区域。实验重复三次,每次重复设置以下9 种处理,每种处理注射10个烟草叶片。4) Mix various recombinant Agrobacterium infection solutions individually or in different proportions, inject them on the back of the tobacco with a 1mL syringe, and mark the water-soaked area of the tobacco leaves with a marker. The experiment was repeated three times, with the following 9 treatments set for each repetition, and 10 tobacco leaves were injected into each treatment.
重组农杆菌REIN1-3Xmyc单独侵染烟草处理:用1mL注射器在烟草背面注射3) 的重组农杆菌EHA105/pCAMBIA2300-REIN1侵染液,用记号笔标记烟草叶片水渍状区域。Treatment of tobacco infected by recombinant Agrobacterium REIN1-3Xmyc alone: Use a 1mL syringe to inject the recombinant Agrobacterium EHA105/pCAMBIA2300-REIN1 infection solution in 3) on the back of the tobacco, and mark the water-soaked area of the tobacco leaves with a marker.
重组农杆菌REIN1219I-3Xmyc单独侵染烟草处理:用1mL注射器在烟草背面注射3)的重组农杆菌EHA105/pCAMBIA2300-REIN1219I侵染液,用记号笔标记烟草叶片水渍状区域。Recombinant Agrobacterium REIN1 219I -3Xmyc alone infects tobacco treatment: Use a 1mL syringe to inject the recombinant Agrobacterium EHA105/pCAMBIA2300-REIN1 219I infection solution in 3) on the back of the tobacco, and mark the water-soaked area of the tobacco leaves with a marker pen.
重组农杆菌GFP-3Xmyc单独侵染烟草处理:用1mL注射器在烟草背面注射3)的重组农杆菌EHA105/pCAMBIA2300-GFP侵染液,用记号笔标记烟草叶片水渍状区域。Recombinant Agrobacterium tumefaciens GFP-3Xmyc alone infects tobacco treatment: Use a 1mL syringe to inject the recombinant Agrobacterium tumefaciens EHA105/pCAMBIA2300-GFP infection solution in 3) on the back of the tobacco, and mark the water-soaked area of the tobacco leaves with a marker.
重组农杆菌REIN1219I-3Xmyc和重组农杆菌REIN1-3Xmyc的1:1处理 (REIN1219I-3Xmyc/REIN1-3Xmyc 1:1):将3)的重组农杆菌 EHA105/pCAMBIA2300-REIN1219I侵染液和重组农杆菌EHA105/pCAMBIA2300-REIN1侵染液按照1:1的体积比混合得到重组农杆菌混合侵染液。用1mL注射器在烟草背面注射该重组农杆菌混合侵染液,用记号笔标记烟草叶片水渍状区域。1:1 treatment of recombinant Agrobacterium REIN1 219I -3Xmyc and recombinant Agrobacterium REIN1-3Xmyc (REIN1 219I -3Xmyc/REIN1-3Xmyc 1:1): Combine the recombinant Agrobacterium EHA105/pCAMBIA2300-REIN1 219I infection solution from 3) and The recombinant Agrobacterium EHA105/pCAMBIA2300-REIN1 infection solution was mixed at a volume ratio of 1:1 to obtain a recombinant Agrobacterium mixed infection solution. Use a 1 mL syringe to inject the recombinant Agrobacterium mixed infection solution on the back of tobacco, and use a marker pen to mark the water-soaked area of the tobacco leaves.
重组农杆菌REIN1219I-3Xmyc和重组农杆菌REIN1-3Xmyc的1:0.5处理 (REIN1219I-3Xmyc/REIN1-3Xmyc 1:0.5):将3)的重组农杆菌 EHA105/pCAMBIA2300-REIN1219I侵染液和重组农杆菌EHA105/pCAMBIA2300-REIN1侵染液按照1:0.5的体积比混合得到重组农杆菌混合侵染液。用1mL注射器在烟草背面注射该重组农杆菌混合侵染液,用记号笔标记烟草叶片水渍状区域。1:0.5 treatment of recombinant Agrobacterium REIN1 219I -3Xmyc and recombinant Agrobacterium REIN1-3Xmyc (REIN1 219I -3Xmyc/REIN1-3Xmyc 1:0.5): Combine the recombinant Agrobacterium EHA105/pCAMBIA2300-REIN1 219I infection solution from 3) and The recombinant Agrobacterium EHA105/pCAMBIA2300-REIN1 infection solution was mixed at a volume ratio of 1:0.5 to obtain a recombinant Agrobacterium mixed infection solution. Use a 1 mL syringe to inject the recombinant Agrobacterium mixed infection solution on the back of tobacco, and use a marker pen to mark the water-soaked area of the tobacco leaves.
重组农杆菌REIN1219I-3Xmyc和重组农杆菌REIN1-3Xmyc的1:0.1处理 (REIN1219I-3Xmyc/REIN1-3Xmyc 1:0.1):将3)的重组农杆菌 EHA105/pCAMBIA2300-REIN1219I侵染液和重组农杆菌EHA105/pCAMBIA2300-REIN1侵染液按照1:0.1的体积比混合得到重组农杆菌混合侵染液。用1mL注射器在烟草背面注射该重组农杆菌混合侵染液,用记号笔标记烟草叶片水渍状区域。1:0.1 treatment of recombinant Agrobacterium REIN1 219I -3Xmyc and recombinant Agrobacterium REIN1-3Xmyc (REIN1 219I -3Xmyc/REIN1-3Xmyc 1:0.1): Combine the recombinant Agrobacterium EHA105/pCAMBIA2300-REIN1 219I infection solution from 3) and The recombinant Agrobacterium EHA105/pCAMBIA2300-REIN1 infection solution was mixed at a volume ratio of 1:0.1 to obtain a recombinant Agrobacterium mixed infection solution. Use a 1 mL syringe to inject the recombinant Agrobacterium mixed infection solution on the back of tobacco, and use a marker pen to mark the water-soaked area of the tobacco leaves.
重组农杆菌REIN1219I-3Xmyc和重组农杆菌GFP-3Xmyc的1:1处理(REIN1219I-3Xmyc/GFP-3Xmyc 1:1):将3)的重组农杆菌EHA105/pCAMBIA2300-REIN1219I侵染液和重组农杆菌EHA105/pCAMBIA2300-GFP侵染液按照1:1的体积比混合得到重组农杆菌混合侵染液。用1mL注射器在烟草背面注射该重组农杆菌混合侵染液,用记号笔标记烟草叶片水渍状区域。1:1 treatment of recombinant Agrobacterium REIN1 219I -3Xmyc and recombinant Agrobacterium GFP-3Xmyc (REIN1 219I -3Xmyc/GFP-3Xmyc 1:1): Combine the recombinant Agrobacterium EHA105/pCAMBIA2300-REIN1 219I infection solution from 3) and The recombinant Agrobacterium EHA105/pCAMBIA2300-GFP infection solution was mixed at a volume ratio of 1:1 to obtain a recombinant Agrobacterium mixed infection solution. Use a 1 mL syringe to inject the recombinant Agrobacterium mixed infection solution on the back of tobacco, and use a marker pen to mark the water-soaked area of the tobacco leaves.
重组农杆菌REIN1219I-3Xmyc和重组农杆菌GFP-3Xmyc的1:0.5处理(REIN1219I-3Xmyc/GFP-3Xmyc 1:0.5):将3)的重组农杆菌EHA105/pCAMBIA2300-REIN1219I侵染液和重组农杆菌EHA105/pCAMBIA2300-GFP侵染液按照1:0.5的体积比混合得到重组农杆菌混合侵染液。用1mL注射器在烟草背面注射该重组农杆菌混合侵染液,用记号笔标记烟草叶片水渍状区域。1:0.5 treatment of recombinant Agrobacterium REIN1 219I -3Xmyc and recombinant Agrobacterium GFP-3Xmyc (REIN1 219I -3Xmyc/GFP-3Xmyc 1:0.5): Combine the recombinant Agrobacterium EHA105/pCAMBIA2300-REIN1 219I infection solution from 3) and The recombinant Agrobacterium EHA105/pCAMBIA2300-GFP infection solution was mixed at a volume ratio of 1:0.5 to obtain a recombinant Agrobacterium mixed infection solution. Use a 1 mL syringe to inject the recombinant Agrobacterium mixed infection solution on the back of tobacco, and use a marker pen to mark the water-soaked area of the tobacco leaves.
重组农杆菌REIN1219I-3Xmyc和重组农杆菌GFP-3Xmyc的1:0.1处理(REIN1219I-3Xmyc/GFP-3Xmyc 1:0.1):将3)的重组农杆菌EHA105/pCAMBIA2300-REIN1219I侵染液和重组农杆菌EHA105/pCAMBIA2300-GFP侵染液按照1:0.1的体积比混合得到重组农杆菌混合侵染液。用1mL注射器在烟草背面注射该重组农杆菌混合侵染液,用记号笔标记烟草叶片水渍状区域。1:0.1 treatment of recombinant Agrobacterium REIN1 219I -3Xmyc and recombinant Agrobacterium GFP-3Xmyc (REIN1 219I -3Xmyc/GFP-3Xmyc 1:0.1): Combine the recombinant Agrobacterium EHA105/pCAMBIA2300-REIN1 219I infection solution from 3) and The recombinant Agrobacterium EHA105/pCAMBIA2300-GFP infection solution was mixed at a volume ratio of 1:0.1 to obtain a recombinant Agrobacterium mixed infection solution. Use a 1 mL syringe to inject the recombinant Agrobacterium mixed infection solution on the back of tobacco, and use a marker pen to mark the water-soaked area of the tobacco leaves.
5)注射后40h左右即可观察到HR反应。5) HR response can be observed about 40 hours after injection.
图3显示了HR检测结果。在烟草中瞬时表达实验表明,注射分别含对照GFP-3XMyc和REIN1-3xMyc的重组农杆菌时,叶片无明显变化,表明均不能启动HR,而注射含REIN1T219I-3XMyc农杆菌,叶片变色,则可激发强烈的HR。含REIN1T219I-3XMyc和 GFP-3Xmyc农杆菌无论以1:1、1:0.5和1:0.1混合注射,均能激发HR(图3中左图所示)。图3中右图显示,当将含REIN1T219I-3XMyc农杆菌与含REIN1-3xMyc农杆菌混合注射1:0.1时,HR不受影响,1:0.5时HR下降,而1:1时则不发生HR,上述结果说明REIN1T219I-3Xmyc重组农杆菌可引起植物HR,而REIN1-3Xmyc重组农杆菌不能引起植物HR。REIN1-3xMyc的增加抑制了HR反应,OsREIN1可抑制OsREIN1T219I1引起的HR。进一步说明sREIN1T219I为隐性变异,只有隐性纯合时才引发HR反应,赋予植株抗病性。 OsREIN1T219I能引起植物HR,可用于调控植物的抗病性,纯合的OsREIN1T219I可提高水稻的抗病性。Figure 3 shows the HR detection results. Transient expression experiments in tobacco showed that when the recombinant Agrobacterium containing control GFP-3XMyc and REIN1-3xMyc were injected, there was no obvious change in the leaves, indicating that neither could initiate HR. However, when the Agrobacterium containing REIN1 T219I -3XMyc was injected, the leaves changed color. Can stimulate strong HR. Agrobacterium containing REIN1 T219I -3XMyc and GFP-3Xmyc can stimulate HR regardless of whether they are mixed at 1:1, 1:0.5 or 1:0.1 (shown in the left picture in Figure 3). The right picture in Figure 3 shows that when Agrobacterium containing REIN1 T219I -3XMyc and Agrobacterium containing REIN1-3xMyc are mixed and injected at 1:0.1, HR is not affected, HR decreases at 1:0.5, but does not occur at 1:1. HR, the above results indicate that the REIN1 T219I -3Xmyc recombinant Agrobacterium can cause plant HR, but the REIN1-3Xmyc recombinant Agrobacterium cannot cause plant HR. The increase of REIN1-3xMyc inhibits the HR response, and OsREIN1 can inhibit the HR caused by OsREIN1 T219I1 . It further illustrates that sREIN1 T219I is a recessive mutation, and only when it is homozygous for recessive mutation, it triggers the HR response and confers disease resistance to the plants. OsREIN1 T219I can cause plant HR and can be used to regulate plant disease resistance. Homozygous OsREIN1 T219I can improve rice disease resistance.
3.水稻MC41和Nip的稻瘟病抗性检测3. Detection of rice blast resistance in rice MC41 and Nip
3.1稻瘟菌准备:3.1 Preparation of blast fungus:
将供试的稻瘟菌Guy11接种至酵母淀粉斜面培养基上(水溶性淀粉10g,酵母浸膏2g,琼脂20g加水至1000ml),待菌丝长满后,用1.5ml无菌水,轻轻刮取菌丝,将菌丝移至燕麦片培养基上(燕麦片30g,CaCl2 0.6g,琼脂15g加水至1000ml),涂布均匀后置于28℃,约10天后培养皿中长满菌丝,25-28℃光照培养约2天,待其充分产孢,用无菌蒸馏水洗下稻瘟病菌孢子,经三层擦镜纸过滤后,在100倍显微镜下计算孢子浓度,调节孢子浓度至5×105个/ml(含0.02%Tween-20)得到孢子悬浮液备用。Inoculate the tested Magnaporthe oryzae Guy11 onto the yeast starch slant medium (10g of water-soluble starch, 2g of yeast extract, 20g of agar plus water to 1000ml). After the mycelium is fully grown, use 1.5ml of sterile water to gently inoculate it. Scrape the mycelium and move it to the oatmeal culture medium (30g oatmeal, 0.6g CaCl 2 , 15g agar, add water to 1000ml), spread it evenly and place it at 28°C. After about 10 days, the culture dish will be filled with bacteria. Silk, culture it under light at 25-28°C for about 2 days. When it is fully sporulated, wash the blast fungus spores with sterile distilled water. After filtering with three layers of lens paper, calculate the spore concentration under a 100x microscope and adjust the spore concentration. to 5×10 5 /ml (containing 0.02% Tween-20) to obtain a spore suspension for later use.
3.2受试植物的抗病性检测:3.2 Disease resistance detection of test plants:
将生长四周的日本晴和MC41水稻幼苗置于接种箱内,用喷雾器对其进行喷雾接种(每个接种箱接种30mL3.1中得到的孢子悬浮液),于28℃黑暗保湿培养24小时后,将接种箱移至正常光照(16h光照/8h黑暗)培养箱生长,5天后拍照并记录水稻的发病情况。Place the four-week-old Nipponbare and MC41 rice seedlings in an inoculation box, use a sprayer to inoculate them (each inoculation box is inoculated with 30 mL of the spore suspension obtained in 3.1), and then incubate them in a dark and humidified environment at 28°C for 24 hours. The inoculation box was moved to a normal light (16h light/8h dark) incubator for growth. After 5 days, photos were taken and the disease of the rice was recorded.
图4显示,Nip在接种6天后病斑明显,新叶和老叶均开始萎蔫,叶尖明显枯萎,受害面积约为40-70%,而MC41老叶上虽有针尖状斑点,叶尖略有枯黄,但仍呈绿色。结果表明MC41抗病性明显高于对照Nip。Figure 4 shows that the lesions of Nip were obvious 6 days after inoculation. Both new and old leaves began to wilt, and the leaf tips were obviously withered. The affected area was about 40-70%. However, although there were needle-like spots on the old leaves of MC41, the leaf tips were slightly There is withered yellow, but it is still green. The results showed that the disease resistance of MC41 was significantly higher than that of the control Nip.
上述实验表明,来自MC41(Tang 10)的OsREIN1突变基因OsREIN1T219I与调控水稻抗病性相关,其纯合水稻品种MC41(Tang 10)与含未突变OsREIN1基因的对照Nip相比增加了抗病性。因此OsREIN1T219I可应用于分子设计育种,培育高抗病水稻。The above experiments show that the OsREIN1 mutant gene OsREIN1 T219I from MC41 (Tang 10) is related to the regulation of rice disease resistance. Its homozygous rice variety MC41 (Tang 10) has increased disease resistance compared with the control Nip containing the unmutated OsREIN1 gene. . Therefore, OsREIN1 T219I can be used in molecular design breeding to breed highly disease-resistant rice.
以上对本发明进行了详述。对于本领域技术人员来说,在不脱离本发明的宗旨和范围,以及无需进行不必要的实验情况下,可在等同参数、浓度和条件下,在较宽范围内实施本发明。虽然本发明给出了特殊的实施例,应该理解为,可以对本发明作进一步的改进。总之,按本发明的原理,本申请欲包括任何变更、用途或对本发明的改进,包括脱离了本申请中已公开范围,而用本领域已知的常规技术进行的改变。按以下附带的权利要求的范围,可以进行一些基本特征的应用。The present invention has been described in detail above. For those skilled in the art, the present invention can be implemented in a wider range under equivalent parameters, concentrations and conditions without departing from the spirit and scope of the invention and without performing unnecessary experiments. Although specific embodiments of the present invention have been shown, it should be understood that further modifications can be made to the invention. In short, based on the principles of the present invention, this application is intended to include any changes, uses, or improvements to the present invention, including changes that depart from the scope disclosed in this application and are made using conventional techniques known in the art. Some essential features may be applied within the scope of the appended claims below.
序列表 sequence list
<110> 中国科学院遗传与发育生物学研究所<110> Institute of Genetics and Developmental Biology, Chinese Academy of Sciences
<120> 水稻OsREIN1T219I蛋白及其编码基因与应用<120> Rice OsREIN1T219I protein and its encoding genes and applications
<130> GNCSQ210207<130>GNCSQ210207
<160> 4<160> 4
<170> PatentIn version 3.5<170> PatentIn version 3.5
<210> 1<210> 1
<211> 981<211> 981
<212> PRT<212> PRT
<213> 水稻(Oryza sativa)<213> Rice (Oryza sativa)
<400> 1<400> 1
Met Glu His Ala Val Val Ser Ala Ala Glu Gly Ala Ile His Thr LeuMet Glu His Ala Val Val Ser Ala Ala Glu Gly Ala Ile His Thr Leu
1 5 10 151 5 10 15
Leu Gly Lys Leu Gly Thr Ile Val Leu Gln Glu Ala Gln Leu Leu GlyLeu Gly Lys Leu Gly Thr Ile Val Leu Gln Glu Ala Gln Leu Leu Gly
20 25 30 20 25 30
Gly Ile Arg Gly Glu Leu Gln His Leu Lys Asp Glu Leu Glu Ser MetGly Ile Arg Gly Glu Leu Gln His Leu Lys Asp Glu Leu Glu Ser Met
35 40 45 35 40 45
Thr Ala Phe Leu Gln Asp Leu Ser Gly Arg Asp Glu Cys Gly Lys GlnThr Ala Phe Leu Gln Asp Leu Ser Gly Arg Asp Glu Cys Gly Lys Gln
50 55 60 50 55 60
Val Lys Ile Trp Lys Lys His Val Arg Glu Ile Ala Tyr Asp Ile GluVal Lys Ile Trp Lys Lys His Val Arg Glu Ile Ala Tyr Asp Ile Glu
65 70 75 8065 70 75 80
Asp Cys Ile Asp Glu Phe Lys His Gln Leu Gly Asp Ser Ser Ser AlaAsp Cys Ile Asp Glu Phe Lys His Gln Leu Gly Asp Ser Ser Ser Ala
85 90 95 85 90 95
Gly Gly Ser Gly Pro Val Val Phe Phe Arg Lys Ala Thr His Ile LeuGly Gly Ser Gly Pro Val Val Phe Phe Arg Lys Ala Thr His Ile Leu
100 105 110 100 105 110
Gln Thr Thr Arg Val Arg His Gln Ile Ala Lys Gln Ile Gln Glu LeuGln Thr Thr Arg Val Arg His Gln Ile Ala Lys Gln Ile Gln Glu Leu
115 120 125 115 120 125
Lys Arg Arg Thr Met Asn Ile Ser Ala Arg Asn Ser Arg Tyr Ser AlaLys Arg Arg Thr Met Asn Ile Ser Ala Arg Asn Ser Arg Tyr Ser Ala
130 135 140 130 135 140
Asn His Leu Ile Ser Gly Thr Ala Gly Asn Ser Met Ala Ala Tyr AspAsn His Leu Ile Ser Gly Thr Ala Gly Asn Ser Met Ala Ala Tyr Asp
145 150 155 160145 150 155 160
Ser Gln Ala Asn Leu Leu Asn Val Asp Thr Arg Ile Thr Ala Leu PheSer Gln Ala Asn Leu Leu Asn Val Asp Thr Arg Ile Thr Ala Leu Phe
165 170 175 165 170 175
Pro Glu Arg Arg Gln Leu Val Gly Ile Glu Pro Arg Gln Gly Asn LeuPro Glu Arg Arg Gln Leu Val Gly Ile Glu Pro Arg Gln Gly Asn Leu
180 185 190 180 185 190
Val His Trp Leu Leu Glu Ala His Val Gln Gln Leu Arg Val Val SerVal His Trp Leu Leu Glu Ala His Val Gln Gln Leu Arg Val Val Ser
195 200 205 195 200 205
Ile Phe Gly Phe Gly Gly Leu Gly Lys Thr Ile Leu Ala Met Thr ThrIle Phe Gly Phe Gly Gly Leu Gly Lys Thr Ile Leu Ala Met Thr Thr
210 215 220 210 215 220
Tyr Gln Ser Leu Ser Gly Arg Asn Gly Pro Phe Gln Cys Gln Ala PheTyr Gln Ser Leu Ser Gly Arg Asn Gly Pro Phe Gln Cys Gln Ala Phe
225 230 235 240225 230 235 240
Val Thr Val Ser Gln Ser Phe Asp Val Lys Val Leu Met Arg Asp IleVal Thr Val Ser Gln Ser Phe Asp Val Lys Val Leu Met Arg Asp Ile
245 250 255 245 250 255
Leu Leu Gln Ile Thr Gln Pro Val Asn Gln Pro Ser Ser Pro Ser ThrLeu Leu Gln Ile Thr Gln Pro Val Asn Gln Pro Ser Ser Pro Ser Thr
260 265 270 260 265 270
Gly Ala Gly Lys Gly Pro Met Glu Gly Leu Leu Lys Gly Met Glu AlaGly Ala Gly Lys Gly Pro Met Glu Gly Leu Leu Lys Gly Met Glu Ala
275 280 285 275 280 285
Trp Asn Val Val Gln Leu Ala Ser Ile Leu Arg Gln Gln Leu Glu AsnTrp Asn Val Val Gln Leu Ala Ser Ile Leu Arg Gln Gln Leu Glu Asn
290 295 300 290 295 300
Lys Arg Tyr Leu Ile Val Leu Asp Asp Ile Trp Ser Met Thr Ala TrpLys Arg Tyr Leu Ile Val Leu Asp Asp Ile Trp Ser Met Thr Ala Trp
305 310 315 320305 310 315 320
Glu Gly Ile Arg Phe Ser Leu Pro Asp Ser Asn Asn Gly Ser Arg IleGlu Gly Ile Arg Phe Ser Leu Pro Asp Ser Asn Asn Gly Ser Arg Ile
325 330 335 325 330 335
Val Val Thr Thr Arg Ile Arg Ala Val Ala His Thr Cys Cys Phe HisVal Val Thr Thr Arg Ile Arg Ala Val Ala His Thr Cys Cys Phe His
340 345 350 340 345 350
Glu Tyr Asp Arg Ala Tyr Glu Ile Lys Pro Leu Thr Asp Cys Glu SerGlu Tyr Asp Arg Ala Tyr Glu Ile Lys Pro Leu Thr Asp Cys Glu Ser
355 360 365 355 360 365
Arg Asp Leu Phe Phe Lys Arg Ile Phe Gly Ser Ser Ile Cys Pro GluArg Asp Leu Phe Phe Lys Arg Ile Phe Gly Ser Ser Ile Cys Pro Glu
370 375 380 370 375 380
His Leu Glu Asp Ile Ser Ala Lys Ile Leu Gly Lys Cys Gly Gly ThrHis Leu Glu Asp Ile Ser Ala Lys Ile Leu Gly Lys Cys Gly Gly Thr
385 390 395 400385 390 395 400
Pro Leu Ser Ile Val Ser Ile Ala Gly Leu Leu Ala Ser Lys Pro ValPro Leu Ser Ile Val Ser Ile Ala Gly Leu Leu Ala Ser Lys Pro Val
405 410 415 405 410 415
His Ser Lys Asp Leu Trp Glu Lys Ile Tyr Ser Ser Leu Gly Ser GluHis Ser Lys Asp Leu Trp Glu Lys Ile Tyr Ser Ser Leu Gly Ser Glu
420 425 430 420 425 430
Ile Glu Thr Asn Pro Ser Leu Asp Arg Leu Lys Lys Ile Leu Glu LeuIle Glu Thr Asn Pro Ser Leu Asp Arg Leu Lys Lys Ile Leu Glu Leu
435 440 445 435 440 445
Ser Tyr Asn Asp Leu Pro Tyr His Leu Lys Thr Cys Phe Leu Tyr LeuSer Tyr Asn Asp Leu Pro Tyr His Leu Lys Thr Cys Phe Leu Tyr Leu
450 455 460 450 455 460
Ser Ile Tyr Pro Glu Asp His Asn Ile Arg Arg Lys Thr Ile Leu ArgSer Ile Tyr Pro Glu Asp His Asn Ile Arg Arg Lys Thr Ile Leu Arg
465 470 475 480465 470 475 480
Arg Trp Val Ala Glu Arg Phe Val Thr Gly Lys Arg Gly Leu Ser ValArg Trp Val Ala Glu Arg Phe Val Thr Gly Lys Arg Gly Leu Ser Val
485 490 495 485 490 495
Phe Glu Val Ala Glu Ser Tyr Phe Asp Glu Phe Ile Asn Arg Ser IlePhe Glu Val Ala Glu Ser Tyr Phe Asp Glu Phe Ile Asn Arg Ser Ile
500 505 510 500 505 510
Ile Gln Pro Val Thr Thr Ser Phe Thr Gly Lys Val Lys Thr Phe ArgIle Gln Pro Val Thr Thr Ser Phe Thr Gly Lys Val Lys Thr Phe Arg
515 520 525 515 520 525
Val His Asp Val Met Leu Glu Ile Ile Val Ser Lys Ser Ile Glu AspVal His Asp Val Met Leu Glu Ile Ile Val Ser Lys Ser Ile Glu Asp
530 535 540 530 535 540
Asn Phe Ile Thr Leu Val Gly Glu Gln Asn Thr Leu Phe Pro Gln GluAsn Phe Ile Thr Leu Val Gly Glu Gln Asn Thr Leu Phe Pro Gln Glu
545 550 555 560545 550 555 560
Lys Ile Arg Arg Leu Thr Val His Ser Arg Gly Val Lys Tyr Ile AlaLys Ile Arg Arg Leu Thr Val His Ser Arg Gly Val Lys Tyr Ile Ala
565 570 575 565 570 575
Thr Arg Glu Ile Leu Cys His Val Arg Ser Leu Ser Ile Phe Ala AspThr Arg Glu Ile Leu Cys His Val Arg Ser Leu Ser Ile Phe Ala Asp
580 585 590 580 585 590
Gly Glu Thr Leu Gln Phe Gly Trp Met Lys Leu Met Arg Ile Leu AspGly Glu Thr Leu Gln Phe Gly Trp Met Lys Leu Met Arg Ile Leu Asp
595 600 605 595 600 605
Leu Glu Gly Tyr Glu Phe Leu Arg Asn Arg Asp Leu Lys Asp Leu CysLeu Glu Gly Tyr Glu Phe Leu Arg Asn Arg Asp Leu Lys Asp Leu Cys
610 615 620 610 615 620
Arg Leu Phe Gln Leu Glu Tyr Leu Asn Leu Arg Arg Thr His Ile ThrArg Leu Phe Gln Leu Glu Tyr Leu Asn Leu Arg Arg Thr His Ile Thr
625 630 635 640625 630 635 640
Glu Leu Pro Ala Gln Ile Gly Asn Leu Lys Lys Leu Glu Thr Leu AspGlu Leu Pro Ala Gln Ile Gly Asn Leu Lys Lys Leu Glu Thr Leu Asp
645 650 655 645 650 655
Ile Arg Asp Thr Ala Ile Lys His Leu Pro Pro Gly Ile Thr Asn LeuIle Arg Asp Thr Ala Ile Lys His Leu Pro Pro Gly Ile Thr Asn Leu
660 665 670 660 665 670
Pro His Leu Ala Asn Leu Leu Gly Gly Arg Arg Ser Tyr Asn His ThrPro His Leu Ala Asn Leu Leu Gly Gly Arg Arg Ser Tyr Asn His Thr
675 680 685 675 680 685
Gly Arg Trp Pro Ile Ser Glu Phe Trp Gly Leu His Ile Pro Asn GluGly Arg Trp Pro Ile Ser Glu Phe Trp Gly Leu His Ile Pro Asn Glu
690 695 700 690 695 700
Leu Arg Lys Met Asp Ser Leu Thr Thr Leu Ala Gln Val Glu Ile ThrLeu Arg Lys Met Asp Ser Leu Thr Thr Leu Ala Gln Val Glu Ile Thr
705 710 715 720705 710 715 720
Thr Ser Thr Ser His Tyr Ile Ser Glu Leu Ser Lys Leu Ser Arg LeuThr Ser Thr Ser His Tyr Ile Ser Glu Leu Ser Lys Leu Ser Arg Leu
725 730 735 725 730 735
Arg Lys Leu Gly Val Leu Met Phe Val Asp Asp Asp Ser Thr Trp AlaArg Lys Leu Gly Val Leu Met Phe Val Asp Asp Asp Ser Thr Trp Ala
740 745 750 740 745 750
Ser Leu Ile Ser Ala Leu Glu Lys Leu Ser Gly Ser Leu Arg Ser LeuSer Leu Ile Ser Ala Leu Glu Lys Leu Ser Gly Ser Leu Arg Ser Leu
755 760 765 755 760 765
Leu Leu Trp Arg Pro Asp Gly Ala Met Asn Phe Asn Ile Val Asn SerLeu Leu Trp Arg Pro Asp Gly Ala Met Asn Phe Asn Ile Val Asn Ser
770 775 780 770 775 780
Leu Ser Ser Pro Pro Ile Phe Thr Lys Ser Met Asn Leu Arg Gly GlnLeu Ser Ser Pro Pro Ile Phe Thr Lys Ser Met Asn Leu Arg Gly Gln
785 790 795 800785 790 795 800
Leu Thr Gln Leu Pro Cys Trp Phe Pro Leu Leu Ser Asn Ile Thr GluLeu Thr Gln Leu Pro Cys Trp Phe Pro Leu Leu Ser Asn Ile Thr Glu
805 810 815 805 810 815
Leu Thr Leu Arg Ala Thr Glu Leu Ser Ala Glu Glu Asp Leu Lys ValLeu Thr Leu Arg Ala Thr Glu Leu Ser Ala Glu Glu Asp Leu Lys Val
820 825 830 820 825 830
Leu Gly Ser Leu Pro Ser Leu Leu Tyr Leu Arg Leu His His Asn AlaLeu Gly Ser Leu Pro Ser Leu Leu Tyr Leu Arg Leu His His Asn Ala
835 840 845 835 840 845
Tyr Ile Gly Thr Glu Phe Ser Ala Ser Ala Gly Glu Phe Pro Ser LeuTyr Ile Gly Thr Glu Phe Ser Ala Ser Ala Gly Glu Phe Pro Ser Leu
850 855 860 850 855 860
Arg Leu Leu Val Ile His Leu Asp Met Ser Glu Asp Trp Glu Ala ArgArg Leu Leu Val Ile His Leu Asp Met Ser Glu Asp Trp Glu Ala Arg
865 870 875 880865 870 875 880
Phe Glu Glu Gly Ala Leu Pro Lys Leu Ala Arg Leu Glu Leu Ser LeuPhe Glu Glu Gly Ala Leu Pro Lys Leu Ala Arg Leu Glu Leu Ser Leu
885 890 895 885 890 895
Phe Glu Glu Ala Ser Ile Gln Glu Ile Thr Gly Ile Glu Phe Leu ProPhe Glu Glu Ala Ser Ile Gln Glu Ile Thr Gly Ile Glu Phe Leu Pro
900 905 910 900 905 910
Ser Leu Lys Glu Val Ser Ile Arg Ala Cys His Ser Asn Ile Val AsnSer Leu Lys Glu Val Ser Ile Arg Ala Cys His Ser Asn Ile Val Asn
915 920 925 915 920 925
Val Glu Glu Ile Ala Thr Ser Leu Arg Ala Asp Ala Glu Lys Asn IleVal Glu Glu Ile Ala Thr Ser Leu Arg Ala Asp Ala Glu Lys Asn Ile
930 935 940 930 935 940
Asn Lys Pro Ile Val Thr Phe Glu Glu Lys Gln Trp Val Pro Met ArgAsn Lys Pro Ile Val Thr Phe Glu Glu Lys Gln Trp Val Pro Met Arg
945 950 955 960945 950 955 960
Ser Arg Thr Asp Pro Pro Leu Asp His Met Gly Asn Leu Leu Ser SerSer Arg Thr Asp Pro Pro Leu Asp His Met Gly Asn Leu Leu Ser Ser
965 970 975 965 970 975
Ser Phe Asp Glu AspSer Phe Asp Glu Asp
980 980
<210> 2<210> 2
<211> 2946<211> 2946
<212> DNA<212> DNA
<213> 水稻(Oryza sativa)<213> Rice (Oryza sativa)
<400> 2<400> 2
atggaacatg ctgttgttag tgccgcggaa ggtgcgatcc acactctctt gggaaagctc 60atggaacatg ctgttgttag tgccgcggaa ggtgcgatcc acactctctt gggaaagctc 60
ggcacaatcg tcctccaaga agcccagctt ctgggaggta ttcggggtga actgcaacac 120ggcacaatcg tcctccaaga agcccagctt ctgggaggta ttcggggtga actgcaacac 120
ttgaaggatg aactggagag catgacagcc tttcttcagg acctttctgg gagagatgaa 180ttgaaggatg aactggagag catgacagcc tttcttcagg acctttctgg gagagatgaa 180
tgcggcaagc aagttaagat ttggaagaag catgtgcgtg agattgcata tgatatcgag 240tgcggcaagc aagttaagat ttggaagaag catgtgcgtg agattgcata tgatatcgag 240
gattgtattg atgagttcaa acatcaactt ggtgacagca gtagtgccgg tggcagcggc 300gattgtattg atgagttcaa acatcaactt ggtgacagca gtagtgccgg tggcagcggc 300
cctgtagtgt ttttccgcaa ggccacccac atattgcaga ccaccagagt gaggcatcag 360cctgtagtgt ttttccgcaa ggccacccac atattgcaga ccaccagagt gaggcatcag 360
attgccaaac aaatccaaga actaaaaagg cgtactatga atatcagtgc ccgaaattca 420attgccaaac aaatccaaga actaaaaagg cgtactatga atatcagtgc ccgaaattca 420
aggtatagtg ccaatcatct catctctgga actgctggga atagcatggc tgcatatgat 480aggtatagtg ccaatcatct catctctgga actgctggga atagcatggc tgcatatgat 480
agccaagcta atcttttaaa tgttgatact cgcattactg cactctttcc agagagaagg 540agccaagcta atcttttaaa tgttgatact cgcattactg cactctttcc agagagaagg 540
cagcttgttg gcattgaacc acgtcaggga aatcttgtgc actggttatt ggaggcacat 600cagcttgttg gcattgaacc acgtcaggga aatcttgtgc actggttatt ggaggcacat 600
gtgcaacaat tacgggtggt gtctatattt ggttttggtg gtttgggcaa gacaatactt 660gtgcaacaat tacgggtggt gtctatattt ggttttggtg gtttgggcaa gacaatactt 660
gctatgacaa catatcaaag tctatctgga agaaatggac cttttcaatg tcaagctttt 720gctatgacaa catatcaaag tctatctgga agaaatggac cttttcaatg tcaagctttt 720
gtaactgtgt cccagagttt tgatgtcaag gttctgatga gagatattct tctccaaatc 780gtaactgtgt cccagagttt tgatgtcaag gttctgatga gagatattct tctccaaatc 780
actcaaccag ttaatcaacc gagttctcca tcaactggag ctggcaaagg tcccatggaa 840actcaaccag ttaatcaacc gagttctcca tcaactggag ctggcaaagg tcccatggaa 840
ggcctactca agggcatgga agcatggaat gtggtacaac ttgcgagcat cctcaggcag 900ggcctactca agggcatgga agcatggaat gtggtacaac ttgcgagcat cctcaggcag 900
caattggaaa ataagagata tctgattgtt cttgatgata tctggagcat gactgcatgg 960caattggaaa ataagagata tctgattgtt cttgatgata tctggagcat gactgcatgg 960
gaaggtattc ggttttcttt gccggactca aataatggta gcagaatagt ggttactaca 1020gaaggtattc ggttttcttt gccggactca aataatggta gcagaatagt ggttactaca 1020
cgaatcagag ctgtagcaca cacctgttgt ttccatgagt acgaccgagc ttacgaaatc 1080cgaatcagag ctgtagcaca cacctgttgt ttccatgagt acgaccgagc ttacgaaatc 1080
aaacctctca ctgattgtga atccagagac ttattcttca aaagaatatt tggcagctca 1140aaacctctca ctgattgtga atccagagac ttatcttca aaagaatatt tggcagctca 1140
atttgtcctg agcacttaga agatatttca gctaagattc tgggaaaatg tggtggcaca 1200atttgtcctg agcacttaga agatatttca gctaagattc tgggaaaatg tggtggcaca 1200
cctttatcca tagtcagtat agcaggcctc ttggctagca agcctgtgca cagtaaagat 1260cctttatcca tagtcagtat agcaggcctc ttggctagca agcctgtgca cagtaaagat 1260
ctttgggaga agatttatag ctctcttggt tcagagattg aaaccaatcc atcacttgat 1320ctttgggaga agatttatag ctctcttggt tcagagattg aaaccaatcc atcacttgat 1320
agattgaaga aaatacttga gcttagctat aatgatcttc cttaccactt gaagacttgc 1380agattgaaga aaatacttga gcttagctat aatgatcttc cttaccactt gaagacttgc 1380
ttcttatatt taagcattta ccctgaggac cataatatca gaaggaaaac tatactcagg 1440ttctttatatt taagcattta ccctgaggac cataatatca gaaggaaaac tatactcagg 1440
cgatgggtag cagaacgctt tgtgactggc aaacgtggac tgagtgtttt tgaggtggca 1500cgatgggtag cagaacgctt tgtgactggc aaacgtggac tgagtgtttt tgaggtggca 1500
gaaagctact ttgatgaatt cattaaccgg agcattattc agccagtgac cactagcttt 1560gaaagctact ttgatgaatt cattaaccgg agcattattc agccagtgac cactagcttt 1560
acagggaagg ttaaaacatt ccgagttcat gatgtgatgt tggagatcat tgtgtcaaag 1620acagggaagg ttaaaacatt ccgagttcat gatgtgatgt tggagatcat tgtgtcaaag 1620
tcaattgaag ataattttat cactctagta ggagaacaga acactttgtt tccgcaagag 1680tcaattgaag ataattttat cactctagta ggagaacaga acactttgtt tccgcaagag 1680
aagataaggc ggctaactgt tcatagcaga ggtgtgaaat atattgccac aagagaaata 1740aagataaggc ggctaactgt tcatagcaga ggtgtgaaat atattgccac aagagaaata 1740
ttatgccatg tccggtcctt gagcatattt gccgatggag aaacattgca gtttggttgg 1800ttatgccatg tccggtcctt gagcatattt gccgatggag aaacattgca gtttggttgg 1800
atgaaattaa tgagaatatt ggacttagaa ggctacgaat tcctgagaaa tagagatctc 1860atgaaattaa tgagaatatt ggacttagaa ggctacgaat tcctgagaaa tagagatctc 1860
aaagacttgt gcaggctgtt tcaattggaa taccttaatc tgagaagaac acatattacg 1920aaagacttgt gcaggctgtt tcaattggaa taccttaatc tgagaagaac acatattacg 1920
gaactccctg cacaaatagg aaacctgaag aagttggaga ctctggatat aagggacaca 1980gaactccctg cacaaatagg aaacctgaag aagttggaga ctctggatat aagggacaca 1980
gccataaagc atttgcctcc tggcataacc aatcttccac atttagcaaa cttacttgga 2040gccataaagc atttgcctcc tggcataacc aatcttccac atttagcaaa cttacttgga 2040
ggaagaagat cctataacca cactgggcgg tggcctattt ctgagttctg gggtttacat 2100ggaagaagat cctataacca cactgggcgg tggcctattt ctgagttctg gggtttacat 2100
atccctaacg aacttcgaaa aatggattca cttacaacac ttgcacaggt agaaatcacg 2160atccctaacg aacttcgaaa aatggattca cttacaacac ttgcacaggt agaaatcacg 2160
acctctacat cacattatat cagcgagttg tcgaagctat cccggttgag gaaacttgga 2220acctctacat cacattatat cagcgagttg tcgaagctat cccggttgag gaaacttgga 2220
gtactgatgt ttgttgatga cgacagcacc tgggcatcct tgatctctgc tcttgagaag 2280gtactgatgt ttgttgatga cgacagcacc tgggcatcct tgatctctgc tcttgagaag 2280
ctcagcggca gccttcgctc gttattactt tggcgacctg atggcgcgat gaacttcaac 2340ctcagcggca gccttcgctc gttattactt tggcgacctg atggcgcgat gaacttcaac 2340
attgtcaatt cattatccag tccaccaata tttacgaaaa gtatgaacct tcgaggtcag 2400attgtcaatt cattatccag tccaccaata tttacgaaaa gtatgaacct tcgaggtcag 2400
ttaacacaac taccatgttg gtttcctttg ctttccaaca tcacagaatt aacccttcgc 2460ttaacacaac taccatgttg gtttcctttg ctttccaaca tcacagaatt aacccttcgc 2460
gcaaccgaac taagcgccga ggaagacctg aaggtactag gaagtttacc tagcctgcta 2520gcaaccgaac taagcgccga ggaagacctg aaggtactag gaagtttacc tagcctgcta 2520
tacctcaggt tgcatcacaa tgcatacata ggaacagaat tttctgcttc agcaggggaa 2580tacctcaggt tgcatcacaa tgcatacata ggaacagaat tttctgcttc agcaggggaa 2580
ttcccatctc ttagactgct tgtcattcat ctcgacatgt ctgaagattg ggaggcaaga 2640ttcccatctc ttagactgct tgtcattcat ctcgacatgt ctgaagattg ggaggcaaga 2640
tttgaagaag gggcactacc aaagctagca aggctagagc tgtctctgtt cgaagaagcc 2700tttgaagaag gggcactacc aaagctagca aggctagagc tgtctctgtt cgaagaagcc 2700
tccatccaag agatcactgg catagagttc cttccgagtc tgaaggaagt ctcgattcgt 2760tccatccaag agatcactgg catagagttc cttccgagtc tgaaggaagt ctcgattcgt 2760
gcttgtcaca gcaatatcgt gaatgtggaa gagatagcta cctctctgag ggctgatgcc 2820gcttgtcaca gcaatatcgt gaatgtggaa gagatagcta cctctctgag ggctgatgcc 2820
gagaagaaca tcaacaaacc catcgtcact ttcgaggaga aacagtgggt gccgatgagg 2880gagaagaaca tcaacaaacc catcgtcact ttcgaggaga aacagtgggt gccgatgagg 2880
tcaaggacgg atcctccttt agatcacatg ggaaacctac tatcttcatc tttcgacgaa 2940tcaaggacgg atcctccttt agatcacatg ggaaacctac tatcttcatc tttcgacgaa 2940
gactga 2946gactga 2946
<210> 3<210> 3
<211> 531<211> 531
<212> DNA<212> DNA
<213> 人工序列(Artificial Sequence)<213> Artificial Sequence
<400> 3<400> 3
ccatggagtc aaagattcaa atagaggacc taacagaact cgccgtaaag actggcgaac 60ccatggagtc aaagattcaa atagaggacc taacagaact cgccgtaaag actggcgaac 60
agttcataca gagtctctta cgactcaatg acaagaagaa aatcttcgtc aacatggtgg 120agttcataca gagtctctta cgactcaatg acaagaagaa aatcttcgtc aacatggtgg 120
agcacgacac gcttgtctac tccaaaaata tcaaagatac agtctcagaa gaccaaaggg 180agcacgacac gcttgtctac tccaaaaata tcaaagatac agtctcagaa gaccaaaggg 180
caattgagac ttttcaacaa agggtaatat ccggaaacct cctcggattc cattgcccag 240caattgagac ttttcaacaa agggtaatat ccggaaacct cctcggattc cattgcccag 240
ctatctgtca ctttattgtg aagatagtgg aaaaggaagg tggctcctac aaatgccatc 300ctatctgtca ctttattgtg aagatagtgg aaaaggaagg tggctcctac aaatgccatc 300
attgcgataa aggaaaggcc atcgttgaag atgcctctgc cgacagtggt cccaaagatg 360attgcgataa aggaaaggcc atcgttgaag atgcctctgc cgacagtggt cccaaagatg 360
gacccccacc cacgaggagc atcgtggaaa aagaagacgt tccaaccacg tcttcaaagc 420gacccccacc cacgaggagc atcgtggaaa aagaagacgt tccaaccacg tcttcaaagc 420
aagtggattg atgtgatatc tccactgacg taagggatga cgcacaatcc cactatcctt 480aagtggattg atgtgatatc tccactgacg taagggatga cgcacaatcc cactatcctt 480
cgcaagaccc ttcctctata taaggaagtt catttcattt ggagaggaca g 531cgcaagaccc ttcctctata taaggaagtt catttcattt ggagaggaca g 531
<210> 4<210> 4
<211> 233<211> 233
<212> DNA<212> DNA
<213> 人工序列(Artificial Sequence)<213> Artificial Sequence
<400> 4<400> 4
gcatgccctg ctttaatgag atatgcgaga cgcctatgat cgcatgatat ttgctttcaa 60gcatgccctg ctttaatgag atatgcgaga cgcctatgat cgcatgatat ttgctttcaa 60
ttctgttgtg cacgttgtaa aaaacctgag catgtgtagc tcagatcctt accgccggtt 120ttctgttgtg cacgttgtaa aaaacctgag catgtgtagc tcagatcctt accgccggtt 120
tcggttcatt ctaatgaata tatcacccgt tactatcgta tttttatgaa taatattctc 180tcggttcatt ctaatgaata tatcacccgt tactatcgta tttttatgaa taatattctc 180
cgttcaattt actgattgta ccctactact tatatgtaca atattaaaat gaa 233cgttcaattt actgattgta ccctactact tatatgtaca atattaaaat gaa 233
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