CN118006589A - A combination of acidophilic cellulase and xylanase, its encoding gene and application - Google Patents
A combination of acidophilic cellulase and xylanase, its encoding gene and application Download PDFInfo
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- CN118006589A CN118006589A CN202410156736.1A CN202410156736A CN118006589A CN 118006589 A CN118006589 A CN 118006589A CN 202410156736 A CN202410156736 A CN 202410156736A CN 118006589 A CN118006589 A CN 118006589A
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- egl1
- egl2
- xyn1
- eosinophilic
- gene
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- 108010059892 Cellulase Proteins 0.000 title claims abstract description 49
- 108090000623 proteins and genes Proteins 0.000 title claims abstract description 29
- 101710121765 Endo-1,4-beta-xylanase Proteins 0.000 title abstract description 4
- 229940106157 cellulase Drugs 0.000 title abstract description 4
- 101150075580 Xyn1 gene Proteins 0.000 claims abstract description 81
- 101150003727 egl2 gene Proteins 0.000 claims abstract description 80
- 101150066032 egl-1 gene Proteins 0.000 claims abstract description 77
- 101100011367 Arabidopsis thaliana BHLH2 gene Proteins 0.000 claims abstract description 59
- 108090000790 Enzymes Proteins 0.000 claims abstract description 50
- 102000004190 Enzymes Human genes 0.000 claims abstract description 50
- 108010001817 Endo-1,4-beta Xylanases Proteins 0.000 claims abstract description 44
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- SRBFZHDQGSBBOR-UHFFFAOYSA-N beta-D-Pyranose-Lyxose Natural products OC1COC(O)C(O)C1O SRBFZHDQGSBBOR-UHFFFAOYSA-N 0.000 description 1
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- CWCMIVBLVUHDHK-ZSNHEYEWSA-N phleomycin D1 Chemical compound N([C@H](C(=O)N[C@H](C)[C@@H](O)[C@H](C)C(=O)N[C@@H]([C@H](O)C)C(=O)NCCC=1SC[C@@H](N=1)C=1SC=C(N=1)C(=O)NCCCCNC(N)=N)[C@@H](O[C@H]1[C@H]([C@@H](O)[C@H](O)[C@H](CO)O1)O[C@@H]1[C@H]([C@@H](OC(N)=O)[C@H](O)[C@@H](CO)O1)O)C=1N=CNC=1)C(=O)C1=NC([C@H](CC(N)=O)NC[C@H](N)C(N)=O)=NC(N)=C1C CWCMIVBLVUHDHK-ZSNHEYEWSA-N 0.000 description 1
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N9/00—Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
- C12N9/14—Hydrolases (3)
- C12N9/24—Hydrolases (3) acting on glycosyl compounds (3.2)
- C12N9/2402—Hydrolases (3) acting on glycosyl compounds (3.2) hydrolysing O- and S- glycosyl compounds (3.2.1)
- C12N9/2405—Glucanases
- C12N9/2434—Glucanases acting on beta-1,4-glucosidic bonds
- C12N9/2437—Cellulases (3.2.1.4; 3.2.1.74; 3.2.1.91; 3.2.1.150)
-
- A—HUMAN NECESSITIES
- A23—FOODS OR FOODSTUFFS; TREATMENT THEREOF, NOT COVERED BY OTHER CLASSES
- A23K—FODDER
- A23K20/00—Accessory food factors for animal feeding-stuffs
- A23K20/10—Organic substances
- A23K20/189—Enzymes
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- A—HUMAN NECESSITIES
- A23—FOODS OR FOODSTUFFS; TREATMENT THEREOF, NOT COVERED BY OTHER CLASSES
- A23L—FOODS, FOODSTUFFS OR NON-ALCOHOLIC BEVERAGES, NOT OTHERWISE PROVIDED FOR; PREPARATION OR TREATMENT THEREOF
- A23L2/00—Non-alcoholic beverages; Dry compositions or concentrates therefor; Preparation or treatment thereof
- A23L2/70—Clarifying or fining of non-alcoholic beverages; Removing unwanted matter
- A23L2/84—Clarifying or fining of non-alcoholic beverages; Removing unwanted matter using microorganisms or biological material, e.g. enzymes
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- C05—FERTILISERS; MANUFACTURE THEREOF
- C05F—ORGANIC FERTILISERS NOT COVERED BY SUBCLASSES C05B, C05C, e.g. FERTILISERS FROM WASTE OR REFUSE
- C05F11/00—Other organic fertilisers
- C05F11/08—Organic fertilisers containing added bacterial cultures, mycelia or the like
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- C05—FERTILISERS; MANUFACTURE THEREOF
- C05G—MIXTURES OF FERTILISERS COVERED INDIVIDUALLY BY DIFFERENT SUBCLASSES OF CLASS C05; MIXTURES OF ONE OR MORE FERTILISERS WITH MATERIALS NOT HAVING A SPECIFIC FERTILISING ACTIVITY, e.g. PESTICIDES, SOIL-CONDITIONERS, WETTING AGENTS; FERTILISERS CHARACTERISED BY THEIR FORM
- C05G3/00—Mixtures of one or more fertilisers with additives not having a specially fertilising activity
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- C12N1/00—Microorganisms, e.g. protozoa; Compositions thereof; Processes of propagating, maintaining or preserving microorganisms or compositions thereof; Processes of preparing or isolating a composition containing a microorganism; Culture media therefor
- C12N1/14—Fungi; Culture media therefor
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- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/63—Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
- C12N15/79—Vectors or expression systems specially adapted for eukaryotic hosts
- C12N15/80—Vectors or expression systems specially adapted for eukaryotic hosts for fungi
- C12N15/81—Vectors or expression systems specially adapted for eukaryotic hosts for fungi for yeasts
- C12N15/815—Vectors or expression systems specially adapted for eukaryotic hosts for fungi for yeasts for yeasts other than Saccharomyces
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- C12N9/00—Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
- C12N9/14—Hydrolases (3)
- C12N9/24—Hydrolases (3) acting on glycosyl compounds (3.2)
- C12N9/2402—Hydrolases (3) acting on glycosyl compounds (3.2) hydrolysing O- and S- glycosyl compounds (3.2.1)
- C12N9/2477—Hemicellulases not provided in a preceding group
- C12N9/248—Xylanases
- C12N9/2482—Endo-1,4-beta-xylanase (3.2.1.8)
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- C12Y302/01008—Endo-1,4-beta-xylanase (3.2.1.8)
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Abstract
Description
技术领域Technical Field
本发明属于基因工程领域,具体涉及一种由两个嗜酸性内切葡聚糖酶和一个嗜酸性内切木聚糖酶构成的多酶组合及其编码基因和应用。The invention belongs to the field of genetic engineering, and in particular relates to a multi-enzyme combination consisting of two acidophilic endoglucanases and one acidophilic endoxylanase, as well as a coding gene and application thereof.
技术背景technical background
植物残体是自然界中储量极其丰富的可再生资源,其主要成分包括纤维素和木聚糖。纤维素由D-葡萄糖残基通过β-1,4-糖苷键串联形成长链分子,并以结晶结构形式大量存在;木聚糖则由D-木糖残基通过β-1,4-糖苷键串联形成,是继纤维素之外储量最丰富的多聚糖物质。自然界中,微生物能够分泌包括内切葡聚糖酶和内切木聚糖酶等对植物残体中复杂纤维素和木聚糖成分进行高效水解,从而发挥长链断裂和释放寡糖的作用。因此,内切葡聚糖酶和内切木聚糖酶等多聚糖(纤维素和木聚糖)水解酶被广泛应用于工业的各个领域,包括造纸、纺织、生物能源、饲料、食品等。Plant residues are extremely abundant renewable resources in nature, and their main components include cellulose and xylan. Cellulose is formed by D-glucose residues connected in series through β-1,4-glycosidic bonds to form long-chain molecules, and exists in large quantities in the form of crystalline structures; xylan is formed by D-xylose residues connected in series through β-1,4-glycosidic bonds, and is the most abundant polysaccharide substance after cellulose. In nature, microorganisms can secrete enzymes including endoglucanases and endoxylanases to efficiently hydrolyze the complex cellulose and xylan components in plant residues, thereby playing the role of long-chain breaking and releasing oligosaccharides. Therefore, polysaccharide (cellulose and xylan) hydrolases such as endoglucanases and endoxylanases are widely used in various fields of industry, including papermaking, textiles, bioenergy, feed, food, etc.
随着工业的不断发展,对极端环境下依然能够高效发挥酶解作用的纤维素酶和木聚糖酶产品需求迫切。例如,生物能源领域中植物残体预处理的酸性环境、果汁澄清处理的酸性环境、动物饲料的胃酸环境等急需耐酸或嗜酸性纤维素酶和木聚糖酶在低pH值环境下(pH 2-4)高效水解纤维素和木聚糖促进糖化、澄清以及消化等关键过程。除此之外,农业微生物肥料制造领域通常采用酸处理植物残体在低pH值(3.0左右)条件下发酵制备木霉功能菌孢子产品,然而在此环境下大部分多聚糖水解酶活性低下。因此,发掘能够在酸性环境下(pH 2-4)高效发挥水解作用且具有优异酸稳定性特征的内切葡聚糖酶和内切木聚糖酶能够满足不同领域的工业应用需求。With the continuous development of industry, there is an urgent need for cellulase and xylanase products that can still efficiently perform enzymatic hydrolysis in extreme environments. For example, in the field of bioenergy, the acidic environment of plant residue pretreatment, the acidic environment of juice clarification, and the gastric acid environment of animal feed urgently need acid-resistant or acidophilic cellulase and xylanase to efficiently hydrolyze cellulose and xylan in a low pH environment (pH 2-4) to promote saccharification, clarification, and digestion and other key processes. In addition, in the field of agricultural microbial fertilizer manufacturing, acid-treated plant residues are usually fermented under low pH conditions (about 3.0) to prepare Trichoderma functional fungus spore products, but most polysaccharide hydrolases have low activity in this environment. Therefore, the discovery of endoglucanases and endoxylanases that can efficiently perform hydrolysis in an acidic environment (pH 2-4) and have excellent acid stability characteristics can meet the industrial application needs in different fields.
发明内容Summary of the invention
本发明目的是针对不同领域对酸性条件下(pH<4)高效发挥酶解作用且稳定的内切葡聚糖酶和内切木聚糖酶的迫切需求,而常规酶在此条件下结构不稳定、易失活的现状,提供一种包括两个嗜酸性内切纤维素酶基因和一个嗜酸性内切木聚糖酶基因的多酶组合。The purpose of the present invention is to provide a multi-enzyme combination including two acidophilic endocellulase genes and one acidophilic endoxylanase gene in response to the urgent need for endoglucanases and endoxylanases that can efficiently and stably perform enzymolysis under acidic conditions (pH <4) in different fields, while conventional enzymes are structurally unstable and easily inactivated under such conditions.
本发明的另一目的是提供表达所述三个基因的基因工程菌。Another object of the present invention is to provide a genetically engineered bacterium expressing the three genes.
本发明的又一目的是提供所述三个基因的应用。利用所述三个基因生产的多酶制剂可用于果汁澄清、动物饲料、微生物有机肥的木霉孢子制备等领域,满足低pH值条件下稳定且高效发挥水解作用的需求,带来可观的经济效益。Another object of the present invention is to provide the application of the three genes. The multi-enzyme preparation produced by the three genes can be used in the fields of juice clarification, animal feed, Trichoderma spore preparation of microbial organic fertilizer, etc., meeting the needs of stable and efficient hydrolysis under low pH conditions, and bringing considerable economic benefits.
本发明的目的可通过如下技术方案实现:The purpose of the present invention can be achieved through the following technical solutions:
一种嗜酸性内切葡聚糖酶基因egl1,其核苷酸序列为SEQ ID NO.1。该基因的全长(包含起始密码子和终止密码子)为663bp,G+C含量为49%,编码由219个氨基酸组成的嗜酸性内切葡聚糖酶EGL1,其氨基酸序列为SEQ ID NO.2。The invention discloses an acidophilic endoglucanase gene egl1, whose nucleotide sequence is SEQ ID NO. 1. The full length of the gene (including the start codon and the stop codon) is 663 bp, the G+C content is 49%, and the gene encodes an acidophilic endoglucanase EGL1 composed of 219 amino acids, whose amino acid sequence is SEQ ID NO. 2.
一种嗜酸性内切葡聚糖酶基因egl2,其核苷酸序列为SEQ ID NO.3。该基因的全长(包含起始密码子和终止密码子)为1200bp,G+C含量为49%,编码由399个氨基酸组成的嗜酸性内切葡聚糖酶EGL2,其氨基酸序列为SEQ ID NO.4。An acidophilic endoglucanase gene egl2, whose nucleotide sequence is SEQ ID NO. 3. The full length of the gene (including the start codon and the stop codon) is 1200bp, the G+C content is 49%, and it encodes an acidophilic endoglucanase EGL2 composed of 399 amino acids, whose amino acid sequence is SEQ ID NO. 4.
一种嗜酸性内切木聚糖酶基因xyn1,其核苷酸序列为SEQ ID NO.5。该基因的全长(包含起始密码子和终止密码子)为750bp,G+C含量为54%,编码由249个氨基酸组成的嗜酸性内切葡聚糖酶XYN1,其氨基酸序列为SEQ ID NO.6。An acidophilic endoxylanase gene xyn1, whose nucleotide sequence is SEQ ID NO. 5. The full length of the gene (including the start codon and the stop codon) is 750 bp, the G+C content is 54%, and it encodes an acidophilic endoglucanase XYN1 composed of 249 amino acids, whose amino acid sequence is SEQ ID NO.6.
第一方面,本发明保护一种酶组合,所述酶组合由嗜酸性内切葡聚糖酶EGL1、嗜酸性内切葡聚糖酶EGL2以及嗜酸性内切木聚糖酶XYN1组成;所述嗜酸性内切葡聚糖酶EGL1的氨基酸序列如SEQ ID NO.2所示,所述嗜酸性内切葡聚糖酶EGL2如SEQ ID NO.4所示,所述嗜酸性内切木聚糖酶XYN1如SEQ ID NO.6所示。In the first aspect, the present invention protects an enzyme combination, which consists of an acidophilic endoglucanase EGL1, an acidophilic endoglucanase EGL2 and an acidophilic endoxylanase XYN1; the amino acid sequence of the acidophilic endoglucanase EGL1 is shown in SEQ ID NO.2, the acidophilic endoglucanase EGL2 is shown in SEQ ID NO.4, and the acidophilic endoxylanase XYN1 is shown in SEQ ID NO.6.
第二方面,本发明保护一种与前文所述酶组合相关的基因组合,所述基因组合包括编码嗜酸性内切葡聚糖酶EGL1的基因egl1、编码嗜酸性内切葡聚糖酶EGL2的基因egl2以及编码嗜酸性内切木聚糖酶XYN1的基因xyn1组成;所述基因egl1的如核苷酸序列为SEQ IDNO.1所示;所述基因egl2如核苷酸序列SEQ ID NO.3所示;所述基因xyn1的如核苷酸序列SEQ ID NO.5所示。In the second aspect, the present invention protects a gene combination related to the enzyme combination described above, which comprises gene egl1 encoding acidophilic endoglucanase EGL1, gene egl2 encoding acidophilic endoglucanase EGL2, and gene xyn1 encoding acidophilic endoxylanase XYN1; the nucleotide sequence of gene egl1 is shown in SEQ ID NO.1; the nucleotide sequence of gene egl2 is shown in SEQ ID NO.3; the nucleotide sequence of gene xyn1 is shown in SEQ ID NO.5.
第三方面,本发明保护一种与前文所述基因相关的重组载体组合,所述重组载体组合包括含有嗜酸性内切葡聚糖酶基因egl1的重组载体、含有嗜酸性内切葡聚糖酶基因egl2的重组载体以及含有嗜酸性内切木聚糖酶基因xyn1的重组载体。In a third aspect, the present invention protects a recombinant vector combination related to the genes described above, wherein the recombinant vector combination includes a recombinant vector containing the acidophilic endoglucanase gene egl1, a recombinant vector containing the acidophilic endoglucanase gene egl2, and a recombinant vector containing the acidophilic endoxylanase gene xyn1.
在具体的实施方案中,所述重组载体为重组质粒。In a specific embodiment, the recombinant vector is a recombinant plasmid.
在更具体的实施方案中,本发明公开了三种重组质粒,分别为含有上述嗜酸性内切葡聚糖酶基因egl1的pPICZαA-egl1,嗜酸性内切葡聚糖酶基因egl2的pPICZαA-egl2,以及嗜酸性内切木聚糖酶基因xyn1的pPICZαA-xyn1。均是通过EcoRI和XbaI双酶切法分别将egl1、egl2和xyn1基因cDNA序列插入pPICZαA表达质粒的多克隆位点处并融入质粒正确表达框中,通过博来霉素(zeocin)筛选正确突变子并测序验证获得。In a more specific embodiment, the present invention discloses three recombinant plasmids, namely pPICZαA-egl1 containing the above-mentioned acidophilic endoglucanase gene egl1, pPICZαA-egl2 containing the acidophilic endoglucanase gene egl2, and pPICZαA-xyn1 containing the acidophilic endoxylanase gene xyn1. All of them are obtained by inserting the cDNA sequences of egl1, egl2 and xyn1 genes into the multiple cloning site of the pPICZαA expression plasmid by double restriction digestion with EcoRI and XbaI, and integrating them into the correct expression frame of the plasmid, and screening the correct mutants by zeocin and sequencing to verify the obtained results.
第四方面,本发明还保护含有前文所述的基因组合或前文所述的重组载体的基因工程菌。In a fourth aspect, the present invention also protects genetically engineered bacteria containing the gene combination or the recombinant vector described above.
在具体的实施方案中,所述基因工程菌为分别含有所述嗜酸性内切葡聚糖酶基因egl1、egl2以及嗜酸性内切木聚糖酶基因xyn1的基因工程菌Pichia pastoris X33-egl1、P.pastoris X33-egl2和P.pastoris X33-xyn1。In a specific embodiment, the genetically engineered bacteria are Pichia pastoris X33-egl1, P. pastoris X33-egl2 and P. pastoris X33-xyn1, which contain the acidophilic endoglucanase genes egl1 and egl2 and the acidophilic endoxylanase gene xyn1, respectively.
在具体的实施方案中,所述的基因工程菌均采用如下方法构建:所述的含有嗜酸性内切葡聚糖酶基因egl1、egl2和嗜酸性内切木聚糖酶基因xyn1的重组质粒pPICZαA-egl1、pPICZαA-egl2和pPICZαA-xyn1分别通过电转导入宿主菌P.pastoris X33感受态中,接着通过含有25mg·L-1博来霉素的YPD(2%(w/v)蛋白胨,1%(w/v)酵母粉,2%(w/v)葡萄糖,1M山梨醇,pH 6.0)平板进行突变体筛选,30℃培养48h后挑取转化子,经测序验证和预发酵酶活测定无误后获得正确基因工程菌P.pastoris X33-egl1、P.pastoris X33-egl2和P.pastoris X33-xyn1,-80℃甘油保存。In a specific embodiment, the genetically engineered bacteria are constructed by the following method: the recombinant plasmids pPICZαA-egl1, pPICZαA-egl2 and pPICZαA-xyn1 containing the acidophilic endoglucanase genes egl1, egl2 and the acidophilic endoxylanase gene xyn1 are respectively introduced into the host bacteria P. pastoris X33 competent state by electrotransformation, and then mutants are screened on YPD (2% (w/v) peptone, 1% (w/v) yeast powder, 2% (w/v) glucose, 1M sorbitol, pH 6.0) plates containing 25 mg·L -1 bleomycin, and transformants are picked after culturing at 30°C for 48 hours. After sequencing verification and pre-fermentation enzyme activity determination, the correct genetically engineered bacteria P. pastoris X33-egl1, P. pastoris X33-egl2 and P. pastoris X33-xyn1 are obtained and stored in glycerol at -80°C.
所述的嗜酸性内切葡聚糖酶蛋白EGL1和EGL2以及嗜酸性内切木聚糖酶蛋白XYN1的生产方法如下:The production methods of the acidophilic endoglucanase proteins EGL1 and EGL2 and the acidophilic endoxylanase protein XYN1 are as follows:
1)将基因工程菌P.pastoris X33-egl1、P.pastoris X33-egl2和P.pastorisX33-xyn1分别少量菌体接种到含100mg·L-1博来霉素的BMGY液体培养基中(1%(w/v)酵母粉,2%(w/v)蛋白胨,4×10-5%(w/v)生物素,1.34%(w/v)YNB,1%(v/v)甘油),黑暗条件下28℃、250rpm摇床培养24h,8000rpm离心5min去上清,收获菌体。1) A small amount of genetically engineered bacteria P. pastoris X33-egl1, P. pastoris X33-egl2 and P. pastoris X33- xyn1 were inoculated into BMGY liquid culture medium (1% (w/v) yeast powder, 2% (w/v) peptone, 4×10 -5 % (w/v) biotin, 1.34% (w/v) YNB, 1% (v/v) glycerol) containing 100 mg·L -1 bleomycin, cultured in a shaking incubator at 28° C. and 250 rpm for 24 h in the dark, centrifuged at 8000 rpm for 5 min, and the supernatant was removed to harvest the bacteria.
2)将各工程菌菌体分别重新转接至含1%甲醇的BMMY液体培养基中(1%(w/v)酵母粉,2%(w/v)蛋白胨,4×10-5%(w/v)生物素,1.34%(w/v)YNB,1%(v/v)甲醇),黑暗条件下28℃、250rpm摇床培养,每24h添加一次甲醇(1%(v/v)含量),72h后8000rpm离心5min去除菌体沉淀,分别获得EGL1、EGL2和XYN1蛋白发酵液。2) Each engineered bacterial cell was re-transferred into BMMY liquid culture medium containing 1% methanol (1% (w/v) yeast powder, 2% (w/v) peptone, 4× 10-5 % (w/v) biotin, 1.34% (w/v) YNB, 1% (v/v) methanol), and cultured in a shaking incubator at 28°C and 250 rpm in the dark. Methanol (1% (v/v) content) was added once every 24 h. After 72 h, the cells were centrifuged at 8000 rpm for 5 min to remove the bacterial precipitate, and EGL1, EGL2 and XYN1 protein fermentation broths were obtained, respectively.
3)取少量发酵液经SDS-PAGE凝胶电泳和DNS法酶活测定验证,确认无误后利用分子筛技术大批量纯化,纯化后各蛋白溶解于100mM磷酸钾溶液中(pH 6.6),BCA法测定蛋白含量均在1.0-2.0g·L-1之间,-80℃保存待用。3) A small amount of fermentation broth was verified by SDS-PAGE gel electrophoresis and DNS enzyme activity assay. After confirmation, it was purified in large quantities using molecular sieve technology. After purification, each protein was dissolved in 100 mM potassium phosphate solution (pH 6.6). The protein content was determined by BCA method and was between 1.0-2.0 g·L -1 . The protein was stored at -80°C for use.
第五方面,本发明保护SEQ ID NO.1、SEQ ID NO.3和SEQ ID NO.5所示基因编码的嗜酸性内切葡聚糖酶EGL1、EGL2和嗜酸性内切木聚糖酶XYN1三者组合或单独在果汁澄清、动物饲料或生物有机肥木霉孢子等生产酸性环境下的应用。In a fifth aspect, the present invention protects the use of the combination or individual of the acidophilic endoglucanases EGL1, EGL2 and the acidophilic endoxylanase XYN1 encoded by the genes shown in SEQ ID NO.1, SEQ ID NO.3 and SEQ ID NO.5 in the production of acidic environments such as juice clarification, animal feed or biological organic fertilizer Trichoderma spores.
第六方面,本发明还保护前文所述的基因组合、重组载体组合或基因工程菌组合在果汁澄清、动物饲料或生物有机肥木霉孢子等生产酸性环境下的应用。In a sixth aspect, the present invention also protects the use of the aforementioned gene combination, recombinant vector combination or genetically engineered bacteria combination in the production of acidic environments such as juice clarification, animal feed or biological organic fertilizer Trichoderma spores.
本发明的有益效果如下:The beneficial effects of the present invention are as follows:
本发明提供一种嗜酸性多酶组合、基因组合、载体组合及其工程菌,包括嗜酸性内切葡聚糖酶基因egl1、egl2和嗜酸性内切木聚糖酶基因xyn1,其中表达蛋白EGL1和EGL2能够将微生物难降解的纤维素水解成可溶性纤维寡糖,XYN1能够将木聚糖水解成可溶性木寡糖。EGL1、EGL2和XYN1的最适反应温度均为为50℃,最适反应pH值在3.0-3.5区间。EGL1、EGL2和XYN1能够分别在pH 3.0-4.0、pH 2.5-4.0和pH2.0-4.0区间保持80%以上的酶活性。EGL1能够在极酸环境下(pH 0.5-4.0)保持结构和酶活稳定,而EGL2和XYN1能够在pH≥2.0条件下保持结构和酶活稳定。三者形成的多酶组合能够实现在pH 2.0-4.0条件下稳定高效水解纤维素、木聚糖等成分,协同效果显著。这一特性高度符合果汁澄清、动物饲料以及微生物有机肥木霉孢子生产等酸性环境,从而增强果汁澄清度、促进动物饲料吸收、提高木霉发酵效率和孢子产量。The invention provides an acidophilic multi-enzyme combination, a gene combination, a vector combination and an engineered bacterium thereof, comprising acidophilic endoglucanase genes egl1 and egl2 and acidophilic endoxylanase gene xyn1, wherein the expressed proteins EGL1 and EGL2 can hydrolyze cellulose that is difficult to degrade by microorganisms into soluble cellooligosaccharides, and XYN1 can hydrolyze xylan into soluble xylo-oligosaccharides. The optimum reaction temperature of EGL1, EGL2 and XYN1 is 50°C, and the optimum reaction pH value is in the range of 3.0-3.5. EGL1, EGL2 and XYN1 can maintain more than 80% of enzyme activity in the range of pH 3.0-4.0, pH 2.5-4.0 and pH2.0-4.0, respectively. EGL1 can maintain stable structure and enzyme activity in an extremely acidic environment (pH 0.5-4.0), while EGL2 and XYN1 can maintain stable structure and enzyme activity under the condition of pH≥2.0. The multi-enzyme combination formed by the three can achieve stable and efficient hydrolysis of cellulose, xylan and other components under pH 2.0-4.0 conditions, with significant synergistic effects. This feature is highly suitable for acidic environments such as juice clarification, animal feed, and microbial organic fertilizer Trichoderma spore production, thereby enhancing juice clarity, promoting animal feed absorption, and improving Trichoderma fermentation efficiency and spore production.
附图说明BRIEF DESCRIPTION OF THE DRAWINGS
图1嗜酸性内切葡聚糖酶EGL1、EGL2和嗜酸性内切木聚糖酶XYN1的SDS-PAGE图。FIG1 is an SDS-PAGE image of acidophilic endoglucanases EGL1, EGL2 and acidophilic endoxylanase XYN1.
A:嗜酸性内切葡聚糖酶EGL1;B:嗜酸性内切葡聚糖酶EGL2;C:嗜酸性内切木聚糖酶XYN1。A: Acidophilic endoglucanase EGL1; B: Acidophilic endoglucanase EGL2; C: Acidophilic endoxylanase XYN1.
图2嗜酸性内切葡聚糖酶EGL1、EGL2和嗜酸性内切木聚糖酶XYN1的最适温度及温度稳定性测定。Fig. 2 Optimal temperature and temperature stability determination of acidophilic endoglucanases EGL1, EGL2 and acidophilic endoxylanase XYN1.
A:EGL1最适温度,将适量EGL1与含有0.5%羧甲基纤维素钠(CMC-Na)的柠檬酸缓冲液(pH 3.5)混合,分别在30℃、40℃、50℃、60℃、70℃、80℃、90℃和100℃水浴温度下反应30min,经DNS法测定酶活;A: Optimum temperature of EGL1. An appropriate amount of EGL1 was mixed with citric acid buffer (pH 3.5) containing 0.5% sodium carboxymethyl cellulose (CMC-Na), and reacted at 30°C, 40°C, 50°C, 60°C, 70°C, 80°C, 90°C and 100°C in a water bath for 30 min. The enzyme activity was determined by the DNS method.
B:EGL2最适温度,方法同EGL1;B: Optimum temperature of EGL2, the method is the same as EGL1;
C:XYN1最适温度,将适量XYN1与含有1%燕麦木聚糖的柠檬酸缓冲液(pH 3.5)混合,分别在30℃、40℃、50℃、60℃、70℃、80℃、90℃和100℃水浴温度下反应10min,经DNS法测定酶活;C: Optimum temperature of XYN1. An appropriate amount of XYN1 was mixed with citric acid buffer (pH 3.5) containing 1% oat xylan, and reacted at 30°C, 40°C, 50°C, 60°C, 70°C, 80°C, 90°C and 100°C in a water bath for 10 min. The enzyme activity was determined by the DNS method.
D:EGL1温度稳定性,EGL1蛋白溶液不同温度下(30℃、40℃、50℃、60℃、70℃、80℃)孵育不同时间(15min、30min、45min、60min),经DNS法测定剩余酶活;D: Temperature stability of EGL1, the EGL1 protein solution was incubated at different temperatures (30°C, 40°C, 50°C, 60°C, 70°C, 80°C) for different time periods (15 min, 30 min, 45 min, 60 min), and the residual enzyme activity was determined by the DNS method;
E:EGL2温度稳定性,方法同EGL1;E: EGL2 temperature stability, the method is the same as EGL1;
F:XYN1稳定稳定性,方法同EGL1。F: XYN1 stabilization, the method is the same as EGL1.
图3嗜酸性内切葡聚糖酶EGL1、EGL2和嗜酸性内切木聚糖酶XYN1的最适pH及pH稳定性测定。Figure 3 Optimal pH and pH stability determination of acidophilic endoglucanases EGL1, EGL2 and acidophilic endoxylanase XYN1.
A:EGL1最适pH,配置含有0.5%CMC-Na的不同pH值(0.5、1、1.5、2、2.5、3、3.5、4、5、6、7、8、9、10、10.6)缓冲液,加入适量EGL1后50℃反应30min,经DNS法测定酶活;A: The optimal pH of EGL1, different pH values (0.5, 1, 1.5, 2, 2.5, 3, 3.5, 4, 5, 6, 7, 8, 9, 10, 10.6) of buffer containing 0.5% CMC-Na were prepared, and the appropriate amount of EGL1 was added to react at 50℃ for 30min, and the enzyme activity was determined by DNS method;
B:EGL2最适pH,方法同EGL1;B: Optimal pH for EGL2, the method is the same as that for EGL1;
C:XYN1最适pH,配置含有1%燕麦木聚糖的不同pH值(0.5、1、1.5、2、2.5、3、3.5、4、5、6、7、8、9、10、10.6)缓冲液,加入适量XYN1后50℃反应10min,经DNS法测定酶活;C: The optimal pH of XYN1, different pH values (0.5, 1, 1.5, 2, 2.5, 3, 3.5, 4, 5, 6, 7, 8, 9, 10, 10.6) of buffer containing 1% oat xylan were prepared, and after adding appropriate amount of XYN1, the reaction was carried out at 50℃ for 10min, and the enzyme activity was determined by DNS method;
D:EGL1 pH稳定性,EGL1在不同pH值缓冲液中于4℃孵育1h,接着于50℃和pH 3.5条件下水解0.5%CMC-Na反应30min,经DNS法测定剩余酶活。D: pH stability of EGL1. EGL1 was incubated in buffers with different pH values at 4 °C for 1 h, followed by hydrolysis with 0.5% CMC-Na at 50 °C and pH 3.5 for 30 min. The residual enzyme activity was determined by the DNS method.
E:EGL2 pH稳定性,方法同EGL1;E: pH stability of EGL2, the method is the same as that of EGL1;
F:XYN1 pH稳定性,XYN1在不同pH值缓冲液中于4℃孵育1h,接着在50℃和pH3.0条件下水解1%燕麦木聚糖反应10min,经DNS法测定剩余酶活。F: pH stability of XYN1. XYN1 was incubated in buffers with different pH values at 4°C for 1 h, and then hydrolyzed 1% oat xylan at 50°C and pH 3.0 for 10 min. The residual enzyme activity was determined by the DNS method.
图4嗜酸性内切葡聚糖酶EGL1、EGL2和嗜酸性内切木聚糖酶XYN1在低pH值下高效协同分解玉米芯。Figure 4 Acidophilic endoglucanases EGL1, EGL2 and acidophilic endoxylanase XYN1 efficiently and synergistically decompose corn cobs at low pH.
A:pH2.5情况下,2倍固定体积的酶液(2×EGL1、2×EGL2或2×XYN1),1倍固定体积的酶液两两组合(EGL1+EGL2、EGL1+XYN1或EGL2+XYN1),3倍固定体积酶液(3×EGL1、3×EGL2或3×XYN1)和1倍固定体积酶液三者混合(EGL1+EGL2+XYN1),分别在40℃下水解3mL2%(w/v)玉米芯颗粒10h释放的还原糖量的结果与差异比较。A: At pH 2.5, 2 times the fixed volume of enzyme solution (2×EGL1, 2×EGL2 or 2×XYN1), 1 times the fixed volume of enzyme solution in combination of two (EGL1+EGL2, EGL1+XYN1 or EGL2+XYN1), 3 times the fixed volume of enzyme solution (3×EGL1, 3×EGL2 or 3×XYN1) and 1 times the fixed volume of enzyme solution mixed together (EGL1+EGL2+XYN1) were used to hydrolyze 3 mL of 2% (w/v) corn cob particles at 40°C for 10 h. The results were compared with the differences in the amount of reducing sugar released.
B:pH 3.0情况下,处理同上。B: At pH 3.0, the treatment is the same as above.
生物材料保藏信息Biomaterial Deposit Information
哈茨木霉NJAU4742(Trichoderma harzianum NJAU4742)保藏于中国微生物菌种保藏管理委员会普通微生物中心(简称CGMCC),地址为北京市朝阳区北辰西路1号院3号中国科学院微生物研究所,保藏号分别为CGMCC No.12166,因已在多篇文献中已公开,本申请未提供保藏证明。Trichoderma harzianum NJAU4742 is deposited in the General Microbiology Center of China Microorganism Culture Collection Administration (CGMCC), located at Institute of Microbiology, Chinese Academy of Sciences, No. 3, Yard 1, Beichen West Road, Chaoyang District, Beijing, with the deposit number CGMCC No.12166. As it has been disclosed in many documents, this application does not provide a deposit certificate.
单链青霉(Penicillium singorens)ZL10保藏于中国微生物菌种保藏管理委员会普通微生物中心(简称CGMCC),地址为:北京市朝阳区北辰西路1号院3号中国科学院微生物研究所,保藏号为:CGMCC No.40202,保藏日期:2022年05月23日。Penicillium singorens ZL10 is deposited in the General Microbiology Center of China Culture Collection Administration (CGMCC), located at Institute of Microbiology, Chinese Academy of Sciences, No. 3, Yard 1, Beichen West Road, Chaoyang District, Beijing. The deposit number is CGMCC No.40202 and the deposit date is May 23, 2022.
具体实施方式Detailed ways
以下结合实施例对本发明做进一步详细说明。所用试剂或者仪器设备未注明生产厂商的,均视为可以通过市场购买的常规产品。The present invention is further described in detail below with reference to the examples. The reagents or instruments used without indicating the manufacturer are all regarded as conventional products that can be purchased on the market.
实施例1嗜酸性内切葡聚糖酶EGL1、EGL2和嗜酸性内切木聚糖酶XYN1的制备1.嗜酸性内切葡聚糖酶基因egl1、egl2和嗜酸性内切木聚糖酶基因xyn1的克隆Example 1 Preparation of Acidophilic Endoglucanase EGL1, EGL2 and Acidophilic Endoxylanase XYN1 1. Cloning of Acidophilic Endoglucanase Genes egl1, egl2 and Acidophilic Endoxylanase Gene xyn1
木霉NJAU4742或青霉ZL10在以2%(w/v)葡萄糖作为唯一碳源的无机盐培养基中150rpm摇床培养48h后,将菌丝体转接到含有1%(w/v)结晶纤维的无机盐培养基中150rpm诱导培养12h。然后,将菌体液氮研磨后利用RNeasy Plant Mini Kit(QIAGEN)试剂盒提取结晶纤维诱导的木霉NJAU4742或青霉ZL10总RNA,经PrimeScript RT-PCR Kit(TAKARA)反转试剂盒合成cDNA,并通过引物对F-egl1(5’-CCGgaattcCAAACCAGCTGCGAACAGTATG-3’,SEQID NO.7)和R-egl1(5’-CTAGtctagaTTAGTTGATAGATGCGGTCCAGG-3’,SEQ ID NO.8),F-egl2(5’-CCGgaattcCAGCAAACTGTTTGGGGGC-3’,SEQ ID NO.9)和R-egl2(5’-CTAGtctagaCTATTTCCGGGAAAGGCATGAG-3’,SEQ ID NO.10)从木霉NJAU4742cDNA样品中PCR扩增分别获得egl1和egl2基因的cDNA序列;通过引物对F-xyn1(5’-CCGgaattcATGAACACCCCCAACTCAC-3’,SEQID NO.11)和R-xyn1(5’-CCGgaattcCTAGCGTATTTCGGAGTACGTTTTG-3’,SEQ ID NO.12)从青霉ZL10 cDNA样品中PCR扩增获得xyn1基因的cDNA序列。经切胶回收后溶于双蒸水中,-20℃保存。After Trichoderma NJAU4742 or Penicillium ZL10 were cultured in an inorganic salt medium with 2% (w/v) glucose as the sole carbon source at 150 rpm for 48 h, the mycelium was transferred to an inorganic salt medium containing 1% (w/v) crystalline fiber and induced at 150 rpm for 12 h. Then, the cells were ground with liquid nitrogen and total RNA of Trichoderma NJAU4742 or Penicillium ZL10 induced by crystalline fibers was extracted using RNeasy Plant Mini Kit (QIAGEN), and cDNA was synthesized by reverse sequencing using PrimeScript RT-PCR Kit (TAKARA), and the primer pairs F-egl1 (5′-CCGgaattcCAAACCAGCTGCGAACAGTATG-3′, SEQ ID NO.7) and R-egl1 (5′-CTAGtctagaTTAGTTGATAGATGCGGTCCAGG-3′, SEQ ID NO.8), F-egl2 (5′-CCGgaattcCAGCAAACTGTTTGGGGGC-3′, SEQ ID NO.9) and R-egl2 (5′-CTAGtctagaCTATTTCCGGGAAAGGCATGAG-3′, SEQ ID NO.10). NO.10) was PCR amplified from the cDNA sample of Trichoderma NJAU4742 to obtain the cDNA sequences of egl1 and egl2 genes respectively; the cDNA sequence of the xyn1 gene was PCR amplified from the cDNA sample of Penicillium ZL10 by primer pair F-xyn1 (5'-CCGgaattcATGAACACCCCCAACTCAC-3', SEQ ID NO.11) and R-xyn1 (5'-CCGgaattcCTAGCGTATTTCGGAGTACGTTTTG-3', SEQ ID NO.12). After gel excision and recovery, it was dissolved in double distilled water and stored at -20°C.
其中,反转录反应体系的第一步为(dNTP Mixture(10mM each)1μL;Oligo dTPrimer(2.5μM)1μL;Template RNA 1μg;RNase Free dH2O up to 10μL)反应条件为65℃反应5min,4℃保存10min。第二步为(第一步的反应液10μl;5×PrimeScriptTM Buffer 4μL;RNase Inhibitor(40U·μL-1)0.5μl;PrimeScriptTM RTase(for 2Step)0.5μL;RNase FreedH2O 5μL)反应条件:42℃反应30min,95℃反应5min,4℃保存10min。各基因cDNA序列扩增体系为(Primer star酶(5U/μL)0.5μL;5×PCR Buffer II(Mg2+Plus)10μl;dNTP Mixture(2.5mM each)5μl;模板cDNA 1μL;上游引物(20μM)1μL;下游引物(20μM)1μL;灭菌双蒸水至50μL;PCR扩增程序:98℃变性10sec,60℃退火10sec,72℃延伸1.5min,进行30个循环;72℃延伸10min;4℃冷却10min。The first step of the reverse transcription reaction system was (dNTP Mixture (10mM each) 1μL; Oligo dTPrimer (2.5μM) 1μL; Template RNA 1μg; RNase Free dH 2 O up to 10μL) with reaction conditions of 65℃ for 5min and 4℃ for 10min. The second step was (reaction solution of the first step 10μl; 5× PrimeScript TM Buffer 4μL; RNase Inhibitor (40U·μL -1 ) 0.5μl; PrimeScript TM RTase (for 2Step) 0.5μL; RNase Free dH 2 O 5μL) with reaction conditions of 42℃ for 30min, 95℃ for 5min and 4℃ for 10min. The amplification system of cDNA sequence of each gene was (Primer star enzyme (5U/μL) 0.5μL; 5×PCR Buffer II (Mg 2+ Plus) 10μl; dNTP Mixture (2.5mM each) 5μl; template cDNA 1μL; upstream primer (20μM) 1μL; downstream primer (20μM) 1μL; sterile double distilled water to 50μL; PCR amplification program: denaturation at 98℃ for 10sec, annealing at 60℃ for 10sec, extension at 72℃ for 1.5min, for 30 cycles; extension at 72℃ for 10min; cooling at 4℃ for 10min.
2.表达载体pPICZαA-egl1、pPICZαA-egl2和pPICZαA-xyn1构建2. Construction of expression vectors pPICZαA-egl1, pPICZαA-egl2 and pPICZαA-xyn1
将所述的嗜酸性内切葡聚糖酶基因egl1、egl2和嗜酸性内切木聚糖酶基因xyn1的c DNA序列和pPICZαA质粒序列分别用EcoRI和XbaI进行酶切处理。酶切反应体系为(EcoRI1μL;XbaI1μL;10×M Buffer 5μL;基因片段或表达质粒20μL;灭菌的蒸馏水加至50μL),在37℃水浴反应约3h。酶切产物经琼脂糖凝胶电泳切胶回收。回收后的egl1、egl2或xyn1基因片段和pPICZαA线性化质粒片段分别按10:1混合,在T4连接酶作用下,16℃水浴过夜反应。酶连体系为(双酶切后的pPICZαA线性化质粒0.5μL;双酶切后的egl1、egl2或xyn1基因片段4.5μL;Ligate Solution I 5μL;灭菌双蒸水加至10μL)。The c DNA sequences of the acidophilic endoglucanase genes egl1, egl2 and the acidophilic endoxylanase gene xyn1 and the pPICZαA plasmid sequence were digested with EcoRI and XbaI, respectively. The digestion reaction system was (EcoRI 1μL; XbaI 1μL; 10×M Buffer 5μL; gene fragment or expression plasmid 20μL; sterilized distilled water was added to 50μL), and the reaction was carried out in a 37°C water bath for about 3h. The digestion products were recovered by agarose gel electrophoresis. The recovered egl1, egl2 or xyn1 gene fragments and pPICZαA linearized plasmid fragments were mixed in a ratio of 10:1, and reacted in a 16°C water bath overnight under the action of T4 ligase. The enzyme ligation system is (0.5 μL of pPICZαA linearized plasmid after double enzyme digestion; 4.5 μL of egl1, egl2 or xyn1 gene fragment after double enzyme digestion; 5 μL of Ligate Solution I; add sterile double distilled water to 10 μL).
3.酶连产物转化及阳性克隆子的筛选3. Enzyme-linked product transformation and screening of positive clones
将10μL上述酶连产物与200μL E.coli DH5α感受态细胞混匀,冰浴30min;然后42℃水浴锅中热激处理90s,快速转移至冰浴中冷切1-2min;接着加入800μL液体LLB培养基,37℃摇床100rpm培育1h。然后,4000rpm离心3min,去除大部分上清,将剩余约200μL感受态细胞涂布于含有25mg·L-1博来霉素的LLB琼脂平板上,37℃培养16h,挑选约10个单菌落并编号后接种于3mL含有25mg·L-1博来霉素的LLB试管中,待长出菌落悬液后提质粒测序验证,确保其精确无误。将获得的正确质粒分别命名为pPICZαA-egl1、pPICZαA-egl2和pPICZαA-xyn1。10 μL of the above enzyme-linked product was mixed with 200 μL of E. coli DH5α competent cells and placed in an ice bath for 30 min; then heat-shocked in a 42°C water bath for 90 s, quickly transferred to an ice bath and cooled for 1-2 min; then 800 μL of liquid LLB medium was added and incubated at 37°C at 100 rpm for 1 h. Then, centrifuged at 4000 rpm for 3 min, most of the supernatant was removed, and the remaining approximately 200 μL of competent cells was spread on an LLB agar plate containing 25 mg·L -1 bleomycin, and incubated at 37°C for 16 h. About 10 single colonies were selected and numbered, and then inoculated into a 3 mL LLB test tube containing 25 mg·L -1 bleomycin. After the colony suspension grew, the plasmid was sequenced to verify its accuracy. The correct plasmids obtained were named pPICZαA-egl1, pPICZαA-egl2, and pPICZαA-xyn1, respectively.
4.嗜酸性内切葡聚糖酶基因egl1、egl2和嗜酸性内切木聚糖酶基因xyn1分别在P.pastoris X33中高效表达4. The acidophilic endoglucanase genes egl1, egl2 and the acidophilic endoxylanase gene xyn1 were highly expressed in P. pastoris X33
将分别含有嗜酸性内切葡聚糖酶基因egl1、egl2和嗜酸性内切木聚糖酶基因xyn1的pPICZαA-egl1、pPICZαA-egl2和pPICZαA-xyn1重组质粒用限制性内切酶PmeI进行线性化处理。10μL高浓度线性化质粒(>400ng·μL-1)与200μL P.pastoris X33感受态充分混匀并进行电转处理,电转后立刻加入1mL 1M山梨醇溶液,30℃静置1h,4000rpm离心后去除大部分上清保留约100μL菌液,涂布于含有25mg·L-1博来霉素的YPD培养基上,30℃培养2-3d后,挑取阳性克隆子菌落,转接至含有25mg·L-1博来霉素的新鲜YPD培养基上,30℃培养3d后采用菌落PCR进行突变子验证。The pPICZαA-egl1, pPICZαA-egl2 and pPICZαA-xyn1 recombinant plasmids containing the acidophilic endoglucanase genes egl1, egl2 and the acidophilic endoxylanase gene xyn1 were linearized with the restriction endonuclease PmeI. 10 μL of high-concentration linearized plasmid (>400 ng·μL -1 ) was thoroughly mixed with 200 μL of P.pastoris X33 competent cells and electroporated. Immediately after electroporation, 1 mL of 1 M sorbitol solution was added, and the mixture was allowed to stand at 30°C for 1 hour. After centrifugation at 4000 rpm, most of the supernatant was removed and about 100 μL of bacterial solution was retained. The mixture was spread on YPD medium containing 25 mg·L -1 bleomycin. After culturing at 30°C for 2-3 days, positive clones were picked and transferred to fresh YPD medium containing 25 mg·L -1 bleomycin. After culturing at 30°C for 3 days, mutants were verified by colony PCR.
将上述阳性克隆子利用BMGY培养基30℃,200rpm培养20h,4000rpm离心5min得菌体,转接到等体积新鲜BMMY液体培养基中,30℃、200rpm继续培养,每24h按照1%体积比重新加入甲醇溶液。最低诱导48h后,发酵液离心去沉淀,即为嗜酸性内切葡聚糖酶EGL1、EGL2或嗜酸性内切木聚糖酶XYN1的粗酶液。取10μL EGL1或EGL2纯化蛋白加入1mL含有0.5%羧甲基纤维素钠的柠檬酸缓冲液(pH 3.5)中,于50℃反应30min后,加入1mL的DNS试剂充分混匀后沸水浴10min,用520nm波长处的吸光值强弱测定酶解效率,利用葡萄糖溶液做标准曲线。酶活单位定义为每分钟产生1μmol还原糖所需的酶量,测得EGL1和EGL2比活力分别为23.85U·mg-1和31.61U·mg-1。取2μL XYN1纯化蛋白加入1mL含有1%燕麦木聚糖的柠檬酸缓冲液(pH 3.0)中,于50℃反应10min后,利用DNS法测定酶活,以不同浓度木糖溶液做标准曲线。测得XYN1比活力为1631.28U·mg-1。The above positive clones were cultured in BMGY medium at 30°C and 200rpm for 20h, centrifuged at 4000rpm for 5min to obtain the bacteria, transferred to an equal volume of fresh BMMY liquid medium, continued to be cultured at 30°C and 200rpm, and methanol solution was added again at a volume ratio of 1% every 24h. After the minimum induction for 48h, the fermentation broth was centrifuged to remove the precipitate, which was the crude enzyme solution of acidophilic endoglucanase EGL1, EGL2 or acidophilic endoxylanase XYN1. 10μL of EGL1 or EGL2 purified protein was added to 1mL of citric acid buffer (pH 3.5) containing 0.5% sodium carboxymethyl cellulose, reacted at 50°C for 30min, and then 1mL of DNS reagent was added to mix well and boiled in water bath for 10min. The enzymatic efficiency was determined by the absorbance value at a wavelength of 520nm, and the standard curve was made using glucose solution. The enzyme activity unit is defined as the amount of enzyme required to produce 1 μmol of reducing sugar per minute. The specific activities of EGL1 and EGL2 were 23.85 U·mg -1 and 31.61 U·mg -1 , respectively. 2 μL of XYN1 purified protein was added to 1 mL of citric acid buffer (pH 3.0) containing 1% oat xylan. After reacting at 50°C for 10 minutes, the enzyme activity was determined by the DNS method, and the standard curve was made with different concentrations of xylose solution. The specific activity of XYN1 was measured to be 1631.28 U·mg -1 .
实施例2嗜酸性内切葡聚糖酶EGL1、EGL2和嗜酸性内切木聚糖酶XYN1的最适反应温度与温度稳定性的检测Example 2 Detection of the Optimal Reaction Temperature and Temperature Stability of Acidophilic Endoglucanases EGL1, EGL2 and Acidophilic Endoxylanase XYN1
将2μL纯化的嗜酸性内切葡聚糖酶EGL1或EGL2分别加入到1mL含有0.5%CMC-Na的柠檬酸缓冲液(pH 3.5)中,分别在30℃、40℃、50℃、60℃、70℃、80℃、90℃和100℃的水浴温度下反应30min,每个温度设3个重复。将2μL纯化的嗜酸性内切木聚糖酶XYN1加入到1mL含有1%燕麦木聚糖的柠檬酸缓冲液(pH 3.0)中,分别在30℃、40℃、50℃、60℃、70℃、80℃、90℃和100℃的水浴温度下反应10min,每个温度设3个重复。反应结束后立即加入1mLDNS试剂并充分混匀,沸水浴10min后吸取200μL溶液并利用分光光度计检测520nm波长下的吸光值,通过吸光值大小判断嗜酸性内切葡聚糖酶EGL1或EGL2以CMC-Na为底物时,嗜酸性内切木聚糖酶XYN1以燕麦木聚糖为底物时的最适反应温度。取适量EGL1、EGL2或XYN1酶液进行不同温度(30-80℃,梯度为10℃)的水浴孵育,按照孵育15min、30min、45min、60min时间点取出酶液,置于冰上冷却。接着,在最适温度(50℃)和最适pH(3.5或3.0)条件下,利用DNS法检测酶解还原糖释放情况,从而计算剩余酶活。结果表明嗜酸性内切葡聚糖酶EGL1、EGL2和嗜酸性内切木聚糖酶XYN1的最适反应温度均为50℃,在30℃-50℃温度区间,EGL1和EGL2均能够保持80%以上的活性。温度稳定性上,EGL1、EGL2和XYN1均能在50℃及以下温度保持酶活稳定。2 μL of purified acidophilic endoglucanase EGL1 or EGL2 was added to 1 mL of citric acid buffer (pH 3.5) containing 0.5% CMC-Na, and reacted for 30 min at a water bath temperature of 30°C, 40°C, 50°C, 60°C, 70°C, 80°C, 90°C and 100°C, with 3 replicates at each temperature. 2 μL of purified acidophilic endoxylanase XYN1 was added to 1 mL of citric acid buffer (pH 3.0) containing 1% oat xylan, and reacted for 10 min at a water bath temperature of 30°C, 40°C, 50°C, 60°C, 70°C, 80°C, 90°C and 100°C, with 3 replicates at each temperature. After the reaction is completed, 1 mL of DNS reagent is added immediately and mixed thoroughly. After boiling in a water bath for 10 minutes, 200 μL of the solution is drawn and the absorbance at a wavelength of 520 nm is detected by a spectrophotometer. The optimal reaction temperature of the acidophilic endoglucanase EGL1 or EGL2 with CMC-Na as a substrate and the acidophilic endoxylanase XYN1 with oat xylan as a substrate is determined by the absorbance value. Take an appropriate amount of EGL1, EGL2 or XYN1 enzyme solution and incubate in a water bath at different temperatures (30-80°C, with a gradient of 10°C). The enzyme solution is taken out at the time points of 15 minutes, 30 minutes, 45 minutes, and 60 minutes of incubation and placed on ice for cooling. Then, under the conditions of the optimal temperature (50°C) and the optimal pH (3.5 or 3.0), the release of enzymatic reducing sugars is detected by the DNS method to calculate the residual enzyme activity. The results showed that the optimal reaction temperature of acidophilic endoglucanases EGL1, EGL2 and acidophilic endoxylanase XYN1 was 50°C. In the temperature range of 30°C-50°C, EGL1 and EGL2 could maintain more than 80% activity. In terms of temperature stability, EGL1, EGL2 and XYN1 could maintain stable enzyme activity at 50°C and below.
实施例3嗜酸性内切葡聚糖酶EGL1、EGL2和嗜酸性内切木聚糖酶XYN1的最适pH值与pH稳定性检测Example 3 Optimal pH and pH stability test of acidophilic endoglucanases EGL1, EGL2 and acidophilic endoxylanase XYN1
配置含有0.5%CMC-Na或1%燕麦木聚糖的不同pH值缓冲液(0.5、1.0、1.5、2.0、2.5、3.0、3.5、4.0、5.0、6.0、7.0、8.0、9.0、10.0、10.6),分别对应添加2μL纯化的嗜酸性内切葡聚糖酶EGL1、EGL2或嗜酸性内切木聚糖酶XYN1并混匀,50℃下水浴反应30min,用DNS法测定产生的还原糖释放量并计算酶活,从而比较嗜酸性内切葡聚糖酶EGL1、EGL2或嗜酸性内切木聚糖酶XYN1在不同pH条件下水解底物CMC-Na或燕麦木聚糖的能力。除此之外,将EGL1、EGL2或XYN1分别在pH值为0.5、1.0、1.5、2.0、2.5、3.0、3.5、4.0、5.0、6.0、7.0、8.0、9.0、10.0、10.6的缓冲液中4℃孵育1h,之后在最适温度(50℃)和最适pH(3.5或3.0)条件下利用DNS法测定其剩余酶活。最终得出:嗜酸性内切葡聚糖酶EGL1和EGL2的最适反应pH值均为3.5,嗜酸性内切木聚糖酶XYN1最适反应pH值为3.0,EGL1、EGL2和XYN1能够分别在pH3.0-4.0、pH 2.5-4.0和pH2.0-4.0区间保持80%以上的酶活性。EGL1能够在极酸环境下(pH0.5-4.0)保持结构和酶活稳定,而EGL2和XYN1能够在pH≥2.0条件下保持结构和酶活稳定。Different pH buffers (0.5, 1.0, 1.5, 2.0, 2.5, 3.0, 3.5, 4.0, 5.0, 6.0, 7.0, 8.0, 9.0, 10.0, 10.6) containing 0.5% CMC-Na or 1% oat xylan were prepared, and 2 μL of purified acidophilic endoglucanase EGL1, EGL2 or acidophilic endoxylanase XYN1 were added and mixed respectively. The mixture was reacted in a water bath at 50°C for 30 min. The amount of reducing sugar released was determined by DNS method and the enzyme activity was calculated, so as to compare the ability of acidophilic endoglucanase EGL1, EGL2 or acidophilic endoxylanase XYN1 to hydrolyze substrate CMC-Na or oat xylan under different pH conditions. In addition, EGL1, EGL2 or XYN1 were incubated in a buffer solution with a pH value of 0.5, 1.0, 1.5, 2.0, 2.5, 3.0, 3.5, 4.0, 5.0, 6.0, 7.0, 8.0, 9.0, 10.0, 10.6 at 4°C for 1 hour, and then the residual enzyme activity was determined by the DNS method under the optimum temperature (50°C) and the optimum pH (3.5 or 3.0). It was finally concluded that the optimum reaction pH values of acidophilic endoglucanases EGL1 and EGL2 were both 3.5, and the optimum reaction pH value of acidophilic endoxylanase XYN1 was 3.0. EGL1, EGL2 and XYN1 were able to maintain more than 80% of the enzyme activity in the pH 3.0-4.0, pH 2.5-4.0 and pH 2.0-4.0 ranges, respectively. EGL1 can maintain stable structure and enzyme activity in extremely acidic environment (pH 0.5-4.0), while EGL2 and XYN1 can maintain stable structure and enzyme activity under pH ≥ 2.0.
实施例4嗜酸性内切葡聚糖酶EGL1、EGL2和嗜酸性内切木聚糖酶XYN1的多酶协同检测Example 4 Multi-enzyme synergistic detection of acidophilic endoglucanases EGL1, EGL2 and acidophilic endoxylanase XYN1
选择pH 2.5和pH 3.0作为协同效应检测的pH值,并以此pH值配置2%(w/v)的玉米芯颗粒悬液,3mL玉米芯颗粒缓冲液为一个标准反应体积。首先,加入适量的EGL1、EGL2或XYN1于3mL玉米芯缓冲液中,40℃反应10h后通过DNS法测定还原糖释放量。与此同时,不断增加EGL1、EGL2或XYN1的酶量,并重复上述实验,绘制随各自酶量增加对3mL 2%(w/v)玉米芯颗粒还原糖释放量的动态曲线图。分别选择各自曲线的拐点处对应的酶量作为EGL1、EGL2或XYN1各自的标准固定体积,即酶量的增加不会造成还原糖量的显著增加。pH 2.5 and pH 3.0 were selected as the pH values for synergistic effect detection, and a 2% (w/v) corncob particle suspension was prepared at this pH value, and 3 mL corncob particle buffer was used as a standard reaction volume. First, an appropriate amount of EGL1, EGL2 or XYN1 was added to 3 mL corncob buffer, and the reducing sugar release was determined by the DNS method after reacting at 40°C for 10 hours. At the same time, the enzyme amount of EGL1, EGL2 or XYN1 was continuously increased, and the above experiment was repeated to draw a dynamic curve of the reducing sugar release of 3 mL 2% (w/v) corncob particles with the increase of each enzyme amount. The enzyme amount corresponding to the inflection point of each curve was selected as the standard fixed volume of EGL1, EGL2 or XYN1, that is, the increase in the enzyme amount would not cause a significant increase in the amount of reducing sugar.
接着,分别在pH 2.5或pH 3.0条件下设置不同组合于40℃下对3mL 2%(w/v)玉米芯颗粒进行酶解,反应时长为10h,通过比较还原糖释放量检测EGL1、EGL2和XYN1的多酶协同能力。组合包括:2倍固定体积的酶液(2×EGL1、2×EGL2或2×XYN1),1倍固定体积的酶液两两组合(EGL1+EGL2、EGL1+XYN1或EGL2+XYN1),3倍固定体积酶液(3×EGL1、3×EGL2或3×XYN1)和1倍固定体积酶液三者混合(EGL1+EGL2+XYN1)。检测结果表明,嗜酸性纤维素酶EGL1、EGL2和嗜酸性木聚糖XYN1三者间存在显著协同效应,两两组合或三者组合在低pH条件下(2.5-3.0)对底物玉米芯颗粒的水解效果要显著高于任意单一酶。Then, different combinations were set up at pH 2.5 or pH 3.0 to enzymolyze 3 mL of 2% (w/v) corn cob particles at 40°C for 10 h, and the multi-enzyme synergy of EGL1, EGL2 and XYN1 was detected by comparing the amount of reducing sugar released. The combinations included: 2 times the fixed volume of enzyme solution (2×EGL1, 2×EGL2 or 2×XYN1), 1 times the fixed volume of enzyme solution in pairs (EGL1+EGL2, EGL1+XYN1 or EGL2+XYN1), 3 times the fixed volume of enzyme solution (3×EGL1, 3×EGL2 or 3×XYN1) and 1 times the fixed volume of enzyme solution mixed with all three (EGL1+EGL2+XYN1). The test results showed that there was a significant synergistic effect between the acidophilic cellulases EGL1, EGL2 and the acidophilic xylan XYN1. The hydrolysis effect of the three enzymes in combination of two or three on the substrate corncob particles under low pH conditions (2.5-3.0) was significantly higher than that of any single enzyme.
本发明的保护内容不局限于以上实施例。在不背离发明构思的精神和范围下,本领域技术人员能够想到的变化和优点都被包括在本发明中,并且以所附的权利要求为保护范围。The protection content of the present invention is not limited to the above embodiments. Without departing from the spirit and scope of the inventive concept, changes and advantages that can be thought of by those skilled in the art are included in the present invention and are protected by the attached claims.
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