Detailed Description
The present invention will be described in further detail with reference to examples and drawings, but the present invention is not limited thereto.
The experimental procedures for specific experimental conditions not specified in the following examples are generally performed according to conventional experimental conditions or according to experimental conditions recommended by the manufacturers.
The egh31 gene in the embodiment refers to the neutral endoglucanase H31 gene disclosed in the patent 201510036517.0, a neutral endoglucanase and a coding gene and application thereof.
The Bacillus sp.III-3 alkaline endoglucanase gene described in the examples refers to the alkaline endoglucanase gene III-3-a disclosed in patent 200710030788.0, an alkaline endoglucanase gene, a recombinase thereof and applications thereof.
Example 1
1 Material
1.1 strains and vectors
(1) Coli TOP10, E.coli BL21 Star (DE3) were purchased from Invitrogen.
(2) Streptomyces sp.H31 has been disclosed in patent 201510036517.0, a neutral endoglucanase and its coding gene and application.
(3) Coli expression vector pET-28a (+) protein expression vector was purchased from Invitrogen corporation.
(4) Coli ligation T vector was purchased from Takara.
1.2 culture Medium
LB culture medium: 0.5% of yeast powder, 1% of peptone, 1% of NaCl and 2% of Agar added in a solid LB culture medium. When the transformant of the recombinant plasmid is screened, ampicillin (E.coli prokaryotic expression) with the final concentration of 50-100 mug/mL is added.
1.3 Main instrumentation
A PCR instrument: applied Biosystems Inc
A centrifuge: eppendorf Co Ltd
Electrophoresis apparatus: bio-rad Co
Vertical pressure steam sterilization pot: hirayama, Japan Ltd
Gel imaging system: Dolphin-DOC
2 method
2.1 addition of binding Domain (CBD) to H31 endoglucanase Gene Using Overlap PCR technology
2.1.1 bioinformatics analysis methods:
the endoglucanase Egh31 amino acid sequence (see amino acids 1-253 of SEQ ID No: 1) was analyzed using CCD Database (Conserved Domain Database) and found to contain only the cellulase Catalytic Domain (CD) and lack the Cellulase Binding Domain (CBD). The Bacillus sp.III-3 alkaline endoglucanase gene is stored in the laboratory, and the CBD derived from the Bacillus sp.III-3 alkaline endoglucanase is added to the C end of the endoglucanase Egh31 in the part to construct the fusion enzyme Egh 31-CBD.
Bioinformatics analysis tool:
CDD (conserved Domain database) using NCBI (national center for information and intelligence)) (https:// www.ncbi.nlm.nih.gov/cdd) The database was subjected to domain analysis.
SWISS-MODEL: using SWISS-MODEL (https://swissmodel.expasy.org/) The three-dimensional structure of unknown proteins is modeled based on the structure of homologous proteins.
2.1.2 design of Overlap PCR primers
According to the sequence of Bacillus sp.III-3 alkaline cellulase gene and the sequence of egh31 endoglucanase gene, the following primers were designed for Overlap PCR splicing (Table 1).
2.1.3 Overlap PCR in vitro amplification of egh31-CBD Gene
pET-28a-H31 and pET-28a-III-3-a plasmids were extracted. Egh31 upstream and downstream primers in the table 1 are used as primers, and pET-28a-H31 is used as a template; the CBD upstream primer F and the CBD downstream primer R are primers, pET-28a-III-3-a is a template, and the full length of egh31 gene (see the 1 st-759 th base of SEQ ID No: 2) and the CBD of Bacillus sp.III-3 alkaline endoglucanase gene (see the 780 nd 1479 th base of SEQ ID No: 2) are obtained by amplification respectively. The obtained products are mutually used as a template and a primer, and egh31 upstream primer F and CBD downstream primer R are added to amplify to obtain egh31-CBD gene (shown in SEQ ID No: 2).
Wherein, pET-28a-H31 is disclosed in 201510036517.0, a neutral endoglucanase and a coding gene and application thereof; pET-28a-III-3-a is disclosed in "200710030788.0, an alkaline endoglucanase gene, a recombinase thereof and uses thereof".
TABLE 1 Overlap PCR primers
| Primer and method for producing the same
|
Sequence (5 '-3')
|
| egh31 upstream primer F
|
CCGgaattcATGCTCCTCGCCGCCGCCACTC
|
| egh31 downstream primer R
|
GTGTAAATGCACCAGACACTTCCACCACCTGGCAGGCGGGCGC
|
| CBD upstream primer F
|
GCGCCCGCCTGCCAGGTGGTGGAAGTGTCTGGTGCATTTACAC
|
| CBD downstream primer R
|
CCGctcgagTTATTTTGGATTATGAACAA |
2.1.4 construction of recombinant plasmid pET-28a-egh31-CBD
The egh31-CBD gene obtained by amplification was digested simultaneously with EcoRI and XhoI, ligated with the similarly digested pET-28a (+) expression plasmid at 16 ℃ for 12 hours, and transformed into E.coli BL21 Star (DE 3). And (4) sequencing and identifying the transformant.
2.1.5 inducible expression of recombinant E.coli BL21 Star (DE3)
(1) Escherichia coli E.coli BL21 Star (DE3) (E.coli BL21 egh31-CBD for short), which was successfully transferred into pET-28a-egh31-CBD, was inoculated into an appropriate amount of LB medium for overnight culture.
(2) The overnight cultured E.coli BL21 egh31-CBD broth was inoculated into LB medium at 1% inoculum size.
(3) And measuring the OD value of the bacterial liquid at intervals, and adding IPTG (isopropyl-beta-D-thiogalactoside) with the final concentration of 1mM for induction expression when the OD is 0.5-0.6.
(4) After culturing for a proper time, taking the bacterial liquid, centrifuging, adding a buffer solution, cracking cells by using an ultrasonic wall-breaking method or a liquid nitrogen repeated freeze-thaw method, centrifuging the sample at a high speed of 12000r/min for 5min, taking the supernatant, and carrying out the next determination.
2.2 isolation and purification of the enzyme and study of the enzymatic Properties
2.2.1 separation and purification of endoglucanase protein
The recombinant endoglucanase (Egh 31 or rEgh31) expressed in E.coli and the recombinant fusion endoglucanase (Egh 31-CBD) expressed in E.coli used both contained 6 XHis-tag, and thus the protein could be isolated and purified by affinity chromatography. The method comprises the following steps:
(1) cell lysates (E.coli expression system) were dissolved in equilibration buffer. The cell lysate referred to herein is 201510036517.0, which is a crude enzyme solution obtained in step (ii) 10 of example 2.
(2) Subjecting the Ni affinity chromatography column HisTrapTMEquilibrate to baseline with equilibration buffer.
(3) The sample was loaded onto a Ni affinity chromatography column at a flow rate of 1mL/min by a constant flow pump.
(3) Gradient elution is carried out on imidazole elution solution, elution peaks are collected to determine enzyme activity, and after overnight dialysis, the imidazole elution solution is concentrated by 10 times for standby.
2.2.2 enzyme activity determination method
Adding a proper amount of enzyme solution into 1% CMC-Na solution, reacting at 50 deg.C for 30min, adding DNS solution into boiling water bath for 10min, measuring absorbance at 540nm, and calculating reducing sugar by standard curve. The amount of enzyme required to produce 1.0mg of glucose per hour under the above conditions was defined as one unit of enzyme activity, expressed in U/mL.
Definition of specific activity: enzyme activity per mg of protein (U/mg).
2.2.3 electrophoretic analysis of proteins
(1) SDS-PAGE gel formulation
The specific method is shown in Table 2.
(2) Step of electrophoresis
1. Centrifuging the sample at 12000r/min to remove precipitate, adding 5 Xsample buffer solution, boiling in boiling water for 10min, centrifuging to remove precipitate, and collecting the supernatant.
2. Carefully loading the sample by using a sample loader, wherein the sample loading amount is selected according to actual needs, and the sample does not overflow the sample loading hole.
3. Electrophoresis was started immediately after the end of the loading. The sample is in the gel concentration stage, generally low voltage is selected, the voltage is increased after the sample enters the separation gel until the bromophenol blue indicator band is positioned at the bottom of the gel, and the electrophoresis is finished.
4. The gel is carefully removed and stained for a period of time depending on the stain concentration.
5. And after dyeing is finished, pouring out the dyeing solution, washing the dyeing solution for multiple times by using deionized water, and then adding the decoloring solution.
6. And (4) after the decoloration is finished, photographing and analyzing by using a gel imaging system.
The specific steps refer to patent 201510036517.0, neutral endoglucanase and its coding gene and application, step (II) 9 of example 2.
TABLE 2 SDS-PAGE gel formulation
| Components
|
Concentrated gum (5%) (5mL)
|
Separation gel (12%) (10mL)
|
| H2O
|
3.6
|
3.3
|
| 30% acrylamide
|
0.83
|
4.0
|
| 1M Tris-HCL(pH 6.8)
|
0.42
|
Is free of
|
| 1.5M Tris-HCL(pH 8.8)
|
Is free of
|
2.5
|
| 10%SDS
|
0.05
|
0.1
|
| 10%AP
|
0.05
|
0.1
|
| TEMED
|
0.005
|
0.004 |
2.2.4 method for measuring protein concentration
Protein concentration was determined using the BCA protein quantification assay kit.
(1) 5mL of Solution A and 0.1mL of Solution B were used for each reaction to prepare an A + B mixture, which was mixed well.
(2) 0.1mL of sample to be tested is added into 2mL of A + B mixed solution, and the reaction is carried out for 30 minutes at 37 ℃.
(3) After the reaction, the absorbance of light was measured at 562 nm.
(4) Protein concentration was calculated by standard curve.
2.2.5 optimum temperature and thermostability of endoglucanases
Each data in the course of the enzymatic property analyses herein was obtained by taking the average of three replicates.
(1) Optimum reaction temperature
The citric acid buffer solution with pH 7.0 is used as a buffer system, 1% CMC is used as a substrate, the reaction system is 1100 mu L, and the reaction time is 30 min. And (3) measuring the enzyme activity of the endoglucanase Egh31 or Egh31-CBD within the temperature range of 30-80 ℃, calculating the highest enzyme activity to be 100%, further calculating the relative enzyme activity within other temperature ranges, and fitting into a curve for analysis.
(2) Thermal stability
Respectively taking 100 mu L of enzyme solution, preserving the heat for 60min at the temperature of 30-80 ℃, taking a citric acid buffer solution with the pH of 7.0 as a buffer system, taking 1% CMC as a substrate, taking a reaction system as 1100 mu L, measuring the enzyme activity of endoglucanase Egh31 or Egh31-CBD, calculating the highest enzyme activity as 100%, further calculating the relative enzyme activity in other temperature ranges, and fitting into a curve for analysis.
2.2.6 optimum pH and pH stability of endoglucanases
(1) Optimum reaction pH value
The reaction temperature is 60 ℃, 1% CMC is used as a substrate, the reaction system is 1100 mu L, and the reaction time is 30 min. And (3) measuring the enzyme activity of the endoglucanase Egh31 or Egh31-CBD under the condition of pH 3-11, calculating the highest enzyme activity to be 100%, further calculating the relative enzyme activity of other reaction pH values, and fitting a curve to analyze.
(2) Stability of pH value
100 μ L of the enzyme solution was added to 1mL of a buffer solution having a pH of 3 to 11, and the mixture was incubated at 37 ℃ for 60 min. Then adding a reaction substrate CMC-Na solution (the final concentration of the substrate is 1 percent) to react for 30min at 60 ℃, measuring the enzyme activity of the endoglucanase Egh31 or Egh31-CBD, calculating the highest enzyme activity to be 100 percent, further calculating the relative enzyme activities of other pH values, and fitting a curve to analyze.
2.2.7 Effect of surfactant SDS on enzyme Activity
SDS with different concentrations is added into a reaction system containing endoglucanase Egh31 or Egh31-CBD, so that the final concentration of the SDS is 0, 0.5 percent, 1 percent and 2 percent respectively, after being preserved for 60min in a warm bath at 37 ℃, the enzyme activity of the endoglucanase Egh31 or Egh31-CBD is respectively measured according to a conventional method, and the highest enzyme activity is calculated as 100 percent.
3 results and analysis of the experiments
3.1 endoglucanase Egh 31C-terminal addition of heterologous CBD
3.1.1 analysis of endoglucanase Egh 31C-terminal addition of CBD
The amino acid sequence of Egh31 protein was imported into the NCBI CCD Database (Conserved Domain Database), and based on the analysis of this Database (FIG. 1), endoglucanase Egh31 belongs to glycoside hydrolase family 12, but lacks its carbohydrate-binding module (CBM), indicating that the enzyme lacks a binding Domain.
Bacillus sp.III-3 alkaline endoglucanase gene is stored in the laboratory, the encoded alkaline endoglucanase belongs to glycoside hydrolase family 5 (Liu et al, 2011), and the C terminal is a tandem fiber binding domain of CBM17 and 28 families. Families of CBM17 and 28 often form the tandem domain CBM _17_28(Boraston et al, 2002). The structure of the device is schematically shown in figure 2. The fusion enzyme Egh31-CBD was constructed by adding the Bacillus sp.iii-3 alkaline endoglucanase gene encoding binding domain portion to the C-terminus of endoglucanase Egh31, as schematically shown in fig. 3.
3.1.2Overlap PCR in vitro amplification of egh31-CBD Gene
A single-band DNA product was successfully amplified by the experimental procedure (FIG. 4-A), the sequence was sequenced to match the predicted result, and the fusion gene was named egh 31-CBD.
3.1.3 construction of recombinant plasmid pET-28a-egh31-CBD
The egh31-CBD obtained by amplification is extracted and constructed into a pET-28a (+) expression plasmid and transformed into Escherichia coli E.coli BL21 Star (DE 3). Plasmid double-restriction enzyme digestion verification is carried out on transformant extraction, and the result is in accordance with expectation (FIG. 4-B). The recombinant plasmid pET-28a-egh31-CBD is successfully constructed through sequencing verification.
3.1.4 expression of the fusion enzyme Egh31-CBD
And performing induction culture on the recombinant bacteria, repeatedly freezing and thawing the recombinant bacteria by liquid nitrogen, performing centrifugation on the crude enzyme solution to obtain supernatant, purifying the supernatant by affinity chromatography, performing protein electrophoresis after dialysis and concentration by 10 times, and measuring the activity of the CMC enzyme. As can be seen from FIG. 5, Egh31-CBD has been successfully expressed in E.coli and the molecular weight of the fusion enzyme is about 52 kDa. The specific activity of the fusion enzyme Egh31-CBD was 154.8U/mg, which is about 14% higher than that of endoglucanase Egh31(135.7U/mg) without CBD.
3.2 enzymatic Property analysis of the fusion enzyme Egh31-CBD
3.2.1 optimum reaction pH and pH stability
The optimum reaction pH and pH stability of endoglucanases Egh31 and Egh31-CBD expressed by escherichia coli are measured by taking CMC as a substrate at the temperature of 60 ℃ and within the pH range of 3-11. The optimum pH reaction results are shown in FIG. 6-A, which shows that the optimum reaction pH of the fusion enzyme Egh31-CBD was Egh31, which was approximately pH 7. However, the relative activity of the fusion enzyme is slightly reduced under acidic conditions. As can be seen from FIG. 6-B, the tolerance of the fusion enzyme was decreased under acidic conditions (pH3-5), indicating that the pH stability of the fusion enzyme Egh31-CBD was slightly inferior to that of the original recombinant enzyme Egh31 under acidic conditions. As can be seen from the experimental results, the addition of the binding domain had no significant effect on the pH optimum response and pH stability of endoglucanase Egh 31.
3.2.2 optimum reaction temperature and thermal stability
The optimum reaction temperature and the thermal stability of endoglucanases Egh31 and Egh31-CBD expressed by Escherichia coli were determined at pH 7.0 using CMC as a substrate. As shown in FIG. 7-A, the optimal reaction temperatures of the two enzymes are substantially the same, but the relative enzyme activities of the fusion enzymes are greatly improved at 50 ℃, which suggests that the addition of the binding domain can improve the enzyme activity of the endoglucanase Egh31 under the condition of medium temperature, so that the temperature range of the enzymes for playing the role is widened. In the temperature stability study, compared with the original recombinant enzyme Egh31, the thermal stability of the fusion enzyme Egh31-CBD at 55 ℃ is obviously enhanced, the relative enzyme activity of the original recombinant enzyme Egh31 at 55 ℃ is about 60%, and the relative enzyme activity of the fusion enzyme Egh31-CBD is more than 90%. The results of the experiment show that the addition of the binding domain at the C-terminus of endoglucanase Egh31 enhances its thermostability (FIG. 7-B).
3.2.3 tolerance to SDS
In the SDS tolerance assay, the fusion enzyme Egh31-CBD showed higher tolerance. When the final concentration of SDS is 0.5%, the residual enzyme activity is up to above 60%, and when the concentration of SDS is 1%, the enzyme activity is slowly reduced, and in the 2% SDS solution, the relative enzyme activity still exceeds 30%. Whereas the relative enzyme activity of the original recombinant enzyme in 0.5% SDS was less than 40%, the activity decreased faster as the concentration of SDS increased (FIG. 8).
4 small knot
A fusion enzyme Egh31-CBD comprising endoglucanase Egh31 and alkaline endoglucanase III-3 enzyme protein binding domain (CBD) was obtained.
CDB derived from alkaline endoglucanase III-3 enzyme protein was added to the C-terminus of endoglucanase gene Egh31 by the Overlap PCR technique. The specific activity of the fusion enzyme is improved by about 14 percent compared with that of the original Egh 31; the temperature stability of the fusion enzyme is greatly improved at 55 ℃, the relative enzyme activity of the original recombinant enzyme is only about 60 percent, and the fusion enzyme is 90 percent; under the condition of 1% SDS, the relative enzyme activity of the original recombinant enzyme is only about 20%, and the relative enzyme activity of the fusion enzyme is about 60%. The experimental results can show that: the Egh31 endoglucanase added with the CBD binding structure domain has better application prospect in enzyme washing finishing and detergent industry of textile industry.
The above embodiments are preferred embodiments of the present invention, but the present invention is not limited to the above embodiments, and any other changes, modifications, substitutions, combinations, and simplifications which do not depart from the spirit and principle of the present invention should be construed as equivalents thereof, and all such changes, modifications, substitutions, combinations, and simplifications are intended to be included in the scope of the present invention.
Sequence listing
<110> Shenzhen university
<120> enzyme fusion protein and application thereof
<160> 6
<170> SIPOSequenceListing 1.0
<210> 1
<211> 492
<212> PRT
<213> Artificial Sequence (Artificial Sequence)
<220>
<223> amino acid sequence of enzyme fusion protein
<400> 1
Met Leu Leu Ala Ala Ala Thr Pro Ala Arg Ala Asp Thr Thr Ile Cys
1 5 10 15
Glu Pro Phe Gly Ser Thr Val Ile Gln Gly Arg Tyr Val Val Gln Asn
20 25 30
Asn Arg Trp Gly Thr Gly Ala Pro Gln Cys Val Thr Ala Thr Asp Thr
35 40 45
Gly Phe Arg Val Ile Gln Ala Asp Gly Ser Val Pro Thr Asp Gly Ala
50 55 60
Pro Lys Ser Tyr Pro Ser Val Phe Asn Gly Cys His Tyr Thr Asn Cys
65 70 75 80
Ser Pro Gly Thr Arg Leu Pro Ala Arg Ile Ser Thr Ile Ser Ser Ala
85 90 95
Pro Ser Ser Ile Ser Tyr Gly Tyr Val Pro Gly Gly Val Tyr Asn Ala
100 105 110
Ala Tyr Asp Ile Trp Leu Asp Pro Thr Pro Arg Thr Asp Gly Val Asn
115 120 125
Arg Thr Glu Ile Met Ile Trp Phe Asn Arg Val Gly Pro Val Gln Pro
130 135 140
Ile Gly Ser Pro Val Ala Thr Ala Thr Val Gly Gly Arg Thr Trp Glu
145 150 155 160
Val Trp Thr Gly Ser Asn Gly Thr Asn Asp Val Ile Ser Phe Val Ala
165 170 175
Pro Ser Thr Ile Thr Ser Trp Ser Phe Asp Val Met Asp Phe Val Asp
180 185 190
Gln Ala Val Asn Arg Gly Leu Ala Gln Arg Asp Trp Tyr Leu Thr Ser
195 200 205
Val Gln Ala Gly Phe Glu Pro Trp Arg Asp Gly Val Gly Leu Ala Val
210 215 220
His Ser Phe Ser Ser Thr Val Asn Val Gly Gly Asp Pro Gly Gly Pro
225 230 235 240
Gly Gly Pro Gly Ala Pro Ala Pro Ala Cys Gln Val Val Glu Val Ser
245 250 255
Gly Ala Phe Thr Pro Phe Glu Leu Gly Lys Ser Asn Ala Thr Asn Leu
260 265 270
Asp Pro Gly Pro Asp His Val Trp Ala Pro Glu Glu Leu Ser Leu Ser
275 280 285
Gly Glu Tyr Val Arg Ala Arg Ile Lys Gly Val Asn Tyr Glu Pro Ile
290 295 300
Asp Arg Thr Lys Tyr Thr Lys Val Leu Trp Asp Phe Asn Asp Gly Thr
305 310 315 320
Lys Gln Gly Phe Gly Val Asn Gly Asp Ser Pro Asn Lys Glu Leu Ile
325 330 335
Ala Val Asp Asn Glu Asn Asn Thr Leu Lys Ile Ser Gly Leu Asp Val
340 345 350
Ser Asn Asp Val Ser Asp Gly Asn Tyr Trp Ala Asn Ala Arg Leu Ser
355 360 365
Ala Asn Gly Trp Gly Lys Ser Val Asp Ile Leu Gly Ala Glu Lys Leu
370 375 380
Thr Met Asp Val Ile Val Asp Glu Pro Thr Thr Val Ala Ile Ala Ala
385 390 395 400
Ile Pro Gln Gly Pro Ser Ala Asn Trp Ile Asn Pro Ile Cys Ala Val
405 410 415
Lys Val Glu Pro Thr Asp Phe Val Pro Phe Gly Asp Lys Phe Lys Ala
420 425 430
Glu Leu Thr Ile Thr Thr Ala Asp Ser Pro Ala Ile Glu Ala Ile Ala
435 440 445
Met His Ala Glu Asn Asn Asn Met Asn Asn Ile Ile Leu Phe Val Gly
450 455 460
Thr Asp Ala Ala Asp Val Ile Tyr Leu Asp Asn Ile Lys Val Ile Gly
465 470 475 480
Thr Glu Val Glu Ile Pro Val Val His Asn Pro Lys
485 490
<210> 2
<211> 1479
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<220>
<223> nucleotide sequence of enzyme fusion protein
<400> 2
atgctcctcg ccgccgccac tcccgcccgg gcggacacca cgatctgcga gcccttcggg 60
tcgaccgtga tccagggtcg ctacgtcgtc cagaacaacc gctggggcac cggcgccccc 120
cagtgcgtca ccgcgacgga caccggcttc cgggtcatcc aggccgacgg ctcggtgccc 180
accgacggcg ctcccaagtc gtacccgtcg gtcttcaacg gctgccacta caccaactgt 240
tcgcccggga ccaggctccc cgcacggatc agcaccatct ccagcgcgcc cagcagcatc 300
tcctacggct acgtgccggg cggtgtgtac aacgccgcgt acgacatctg gctggacccg 360
acgccccgca ccgacggtgt caaccggacc gagatcatga tctggttcaa ccgggtcggc 420
ccggtccagc cgatcggctc tccggtcgcc accgcaaccg tcggtgggcg cacctgggag 480
gtgtggacgg gcagcaacgg caccaacgac gtgatctcct tcgtcgcccc gtcgaccatc 540
acgagctgga gcttcgacgt catggacttc gtcgaccagg ccgtcaaccg gggcctggcg 600
cagcgcgact ggtacctgac gagcgttcag gccggcttcg aaccgtggcg ggacggcgtc 660
ggactggcgg tgcactcctt ctcctccacc gtgaacgtcg gcggtgaccc cggcgggccg 720
ggcgggccgg gtgccccggc gcccgcctgc caggtggtgg aagtgtctgg tgcatttaca 780
ccattcgagt taggaaaatc taacgcaact aatcttgacc caggtccaga ccatgtttgg 840
gcacctgaag agttaagtct ttctggagaa tatgtacgtg ctcgtattaa aggtgtgaac 900
tatgagccaa tcgaccgtac taaatacacg aaagtacttt gggactttaa tgatggaacg 960
aagcaaggat ttggagtgaa tggagattct ccaaataaag agcttattgc agttgataat 1020
gaaaacaaca ctttgaaaat ttcggggtta gatgtaagta acgatgtttc tgatggcaac 1080
tactgggcta atgctcgtct ttcagccaac ggttggggga aaagtgttga tatattaggt 1140
gctgaaaaac taactatgga tgttattgtt gatgagccga cgacggtagc gattgctgca 1200
attccacaag gtccatcagc aaattggatt aatccaattt gcgcagttaa ggttgagcca 1260
actgatttcg tgccgtttgg agataagttt aaagcagaat taactataac tacagcggac 1320
tctccagcga tagaagcgat tgcgatgcat gctgaaaata acaatatgaa caacatcatt 1380
ctgttcgtag gaactgatgc agctgacgtt atttatttag ataacattaa agtaattgga 1440
acagaagttg aaattccagt tgttcataat ccaaaataa 1479
<210> 3
<211> 31
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<220>
<223> egh31 upstream primer F
<400> 3
ccggaattca tgctcctcgc cgccgccact c 31
<210> 4
<211> 43
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<220>
<223> egh31 downstream primer R
<400> 4
gtgtaaatgc accagacact tccaccacct ggcaggcggg cgc 43
<210> 5
<211> 43
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<220>
<223> CBD upstream primer F
<400> 5
gcgcccgcct gccaggtggt ggaagtgtct ggtgcattta cac 43
<210> 6
<211> 29
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<220>
<223> CBD downstream primer R
<400> 6
ccgctcgagt tattttggat tatgaacaa 29