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CN111607589A - A system construction method for obtaining a large amount of dsRNA in vitro - Google Patents

A system construction method for obtaining a large amount of dsRNA in vitro Download PDF

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CN111607589A
CN111607589A CN202010427109.9A CN202010427109A CN111607589A CN 111607589 A CN111607589 A CN 111607589A CN 202010427109 A CN202010427109 A CN 202010427109A CN 111607589 A CN111607589 A CN 111607589A
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陈航
凌晓霏
陆沁
张金稳
王伟伟
柳鹏飞
汪伟
陈晓鸣
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Research Institute of Resource Insects of Chinese Academy of Forestry
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Abstract

本发明涉及一种体外大量获得白蜡虫dsRNA的体系构建方法,首先提取白蜡虫总RNA并反转录为cDNA后进行PCR扩增,扩增产物与L4440载体质粒分别双酶切,将双酶切后产物连接,得到的重组质粒转化进入大肠杆菌感受态细胞HT115(DE3)菌株中,涂布固体培养基筛选单菌落,然后将单菌落液体摇床培养至OD600=0.38‑0.42,加入IPTG诱导后浓缩菌液,用于RNA干扰实验。本发明通过单细胞克隆大肠杆菌含有白蜡虫目标基因,又通过此大肠杆菌自身新陈代谢和大量的自我繁殖复制,获得大量含白蜡虫基因的dsRNA的菌液,将含dsRNA菌液喷施白蜡虫幼虫,从白蜡虫虫体表面进入体内,有效干扰目标基因表达量。

Figure 202010427109

The invention relates to a method for constructing a system for obtaining a large amount of dsRNA from ashworm in vitro. First, the total RNA of ashworm is extracted and reverse transcribed into cDNA, followed by PCR amplification. After the product is connected, the obtained recombinant plasmid is transformed into Escherichia coli competent cell HT115 (DE3) strain, a solid medium is coated to screen a single colony, and then the single colony is cultured on a liquid shaker to OD 600 =0.38‑0.42, and IPTG is added to induce The bacterial solution was then concentrated and used for RNA interference experiments. In the invention, single-cell cloning of Escherichia coli contains the target gene of the ashworm, and through the self-metabolism of the Escherichia coli and a large amount of self-reproduction and replication, a large amount of bacteria liquid containing the dsRNA gene of the ashworm is obtained, and the bacteria liquid containing the dsRNA is sprayed on the larvae of the ashworm , enter the body from the surface of the worm body, and effectively interfere with the expression of the target gene.

Figure 202010427109

Description

一种体外大量获得白蜡虫dsRNA的体系构建方法A system construction method for obtaining a large amount of dsRNA in vitro

技术领域technical field

本发明属于基因工程技术领域,具体涉及一种体外大量获得白蜡虫dsRNA的体系构建方法。The invention belongs to the technical field of genetic engineering, and in particular relates to a system construction method for obtaining a large amount of dsRNA in vitro.

背景技术Background technique

白蜡虫,Ericerus pela(Chavannes),俗称蜡虫,白蜡虫在分类上属于半翅目(Hemipetera)蚧总科(Coccoidea)白蜡蚧属(Ericerus)(Chavannes,1819)。白蜡虫是一种具有重大经济价值的介壳虫,白蜡虫2龄雄虫幼虫生活在寄主植物枝条上,分泌白色的蜡质覆盖物,这种昆虫分泌的蜡成为白蜡(Cerachinensis,也称虫白蜡),即白蜡虫的分泌物,为中国特产。白蜡是一种天然的高分子化合物,熔点高,化学性稳定。具有防潮、润滑、着光等特点,是一种重要的化工原料,被广泛应用于化工、机械、食品、药业、化妆品、农业等行业。White wax worm, Ericerus pela (Chavannes), commonly known as wax worm, belongs to the genus Ericerus (Chavannes, 1819) in the taxonomy of the Hemipetera family Coccoidea. Cerachinensis is a kind of scale insect with great economic value. The 2nd instar male larvae of Cerachinensis live on the branches of host plants and secrete a white waxy covering. The wax secreted by this insect becomes Cerachinensis, also known as Cerachinensis. ), that is, the secretion of the waxworm, which is a special product of China. White wax is a natural polymer compound with high melting point and chemical stability. It has the characteristics of moisture-proof, lubricating and glossing. It is an important chemical raw material and is widely used in chemical industry, machinery, food, medicine, cosmetics, agriculture and other industries.

RNA干扰(RNA interference,RNAi)是指在真核生物中,由双链RNA(double-stranded RNA,dsRNA)诱发同源mRNA降解,使靶基因表达沉默的现象。dsRNA转染主要有注射、喂食、浸泡、病毒感染和基因枪等方法。但是如果研究对象过小,不能移动的时候,喂食、浸泡、体表吸收的传染方式存在试剂盒制备的dsRNA用量不足的局面。RNA interference (RNAi) refers to the phenomenon that in eukaryotes, homologous mRNA is degraded by double-stranded RNA (dsRNA) and the expression of target genes is silenced. The main methods of dsRNA transfection include injection, feeding, soaking, virus infection and gene gun. However, if the research subject is too small to move, the infection methods of feeding, immersion, and surface absorption may result in insufficient dsRNA prepared by the kit.

本研究的昆虫为白蜡虫,虫体个体较小,且是刺吸式口器,通过吸取寄主盐肤木的汁液生长繁殖,大部分时间不能移动,会采取体表皮肤吸收的方式进行传染。由于体表吸收,用量大,dsRNA在外界不稳定、易降解,需要多次对白蜡昆虫的体表皮肤进行喷施吸收,试剂盒合成dsRNA产量较低(ul计量),不足以用于喷施的转染方式,大量的试剂盒合成使实验成本价格高昂,因此在一些RNA干扰实验中,如何制备高产量的dsRNA是基因工程需要解决的问题。The insects in this study are P. chinensis, which are small in size and have piercing-sucking mouthparts. They grow and reproduce by absorbing the sap of the host, and they cannot move most of the time. They will be infected by skin absorption. Due to body surface absorption and large dosage, dsRNA is unstable and easily degraded in the outside world. It needs to be sprayed and absorbed on the body surface skin of white wax insects for many times. Therefore, in some RNA interference experiments, how to prepare high-yield dsRNA is a problem that needs to be solved in genetic engineering.

发明内容SUMMARY OF THE INVENTION

在RNAi转染过程中,由于客观原因,研究对象不能使用基因枪等微剂量的转染方式,但采取体外转染时,都需要大剂量的dsRNA,因此本发明为了克服现有技术中的不足,提供一种体外大量获得白蜡虫dsRNA的体系构建方法,该方法可为如何低成本获得大量的dsRNA提供参考。In the process of RNAi transfection, due to objective reasons, the research objects cannot use micro-dose transfection methods such as gene guns, but when in vitro transfection is adopted, large doses of dsRNA are required. Therefore, the present invention overcomes the deficiencies in the prior art. , to provide a system construction method for obtaining a large amount of dsRNA in vitro, which can provide a reference for how to obtain a large amount of dsRNA at low cost.

为实现上述目的,本发明采用的技术方案如下:For achieving the above object, the technical scheme adopted in the present invention is as follows:

一种体外大量获得白蜡虫dsRNA的体系构建方法,包括如下步骤:A method for constructing a system for obtaining a large amount of dsRNA in vitro, comprising the following steps:

步骤(1),提取白蜡虫总RNA并反转录为cDNA后进行PCR扩增,扩增产物与L4440载体质粒分别经SacI和SalI双酶切,双酶切后产物利用T4连接酶4℃过夜连接,得到含302a1基因片段的重组质粒302a1-L4440;In step (1), the total RNA of the worm was extracted and reverse transcribed into cDNA, followed by PCR amplification. The amplified product and the L4440 vector plasmid were double digested with SacI and SalI respectively, and the double digested product was digested with T4 ligase overnight at 4°C connected to obtain a recombinant plasmid 302a1-L4440 containing the 302a1 gene fragment;

步骤(2),将步骤(1)得到的302a1-L4440重组质粒转化进入大肠杆菌感受态细胞HT115(DE3)菌株中,涂布固体培养基筛选单菌落,得到302a1-L4440-HT115菌体;In step (2), the 302a1-L4440 recombinant plasmid obtained in step (1) is transformed into the Escherichia coli competent cell HT115 (DE3) strain, and the solid medium is coated to screen a single colony to obtain the 302a1-L4440-HT115 bacterial cell;

步骤(3),将步骤(2)获得的302a1-L4440-HT115菌体液体摇床培养至OD600=0.38-0.42,加入IPTG诱导,获得含有白蜡虫302a1基因片段的dsRNA菌液;step (3), culturing the 302a1-L4440-HT115 bacterial cell liquid obtained in step (2) on a shaker to OD 600 =0.38-0.42, adding IPTG for induction, and obtaining a dsRNA bacterial liquid containing the 302a1 gene fragment of the waxworm;

步骤(4),将步骤(3)得到含有白蜡虫302a1基因片段的dsRNA菌液,浓缩菌液,用于RNA干扰实验。In step (4), the dsRNA bacterial solution obtained in step (3) containing the 302a1 gene fragment of the white wax worm is concentrated, and the bacterial solution is used for the RNA interference experiment.

进一步,优选的是,所述的白蜡虫总RNA包含中白蜡虫302a1基因的总RNA。Further, it is preferred that the total RNA of the white wax worm comprises the total RNA of the white wax worm 302a1 gene.

进一步,优选的是,步骤(1)中,采用PCR扩增的方法,设计302a1基因引物(引物名称为ECEGT01)含SacⅠ和SalⅠ双酶切位点,其中Further, preferably, in step (1), the PCR amplification method is used to design a 302a1 gene primer (the primer name is ECEGT01) containing SacI and SalI double restriction sites, wherein

ECEGT01-F:5'-atgagctccgctctggtataaattcatttggac-3'(SEQ ID NO.6);ECEGT01-F: 5'-atgagctccgctctggtataaattcatttggac-3' (SEQ ID NO. 6);

ECEGT01-R:5'-atgtcgacgcctgttgaatcattatcactccta-3'(SEQ ID NO.7)。ECEGT01-R: 5'-atgtcgacgcctgttgaatcattatcactccta-3' (SEQ ID NO. 7).

进一步,优选的是,步骤(1)中,所述的PCR扩增体系为:Further, preferably, in step (1), the PCR amplification system is:

Figure BDA0002499112300000021
Figure BDA0002499112300000021

PCR扩增程序为:94℃预变性5min;94℃变性30s,60℃退火30s,72℃延伸1min,30次循环;72℃延伸5min,4℃保存。The PCR amplification program was as follows: pre-denaturation at 94 °C for 5 min; denaturation at 94 °C for 30 s, annealing at 60 °C for 30 s, extension at 72 °C for 1 min, 30 cycles; extension at 72 °C for 5 min, and storage at 4 °C.

进一步,优选的是,步骤(1)中,酶切的条件体系为:Further, it is preferred that, in step (1), the conditional system of enzyme cleavage is:

Figure BDA0002499112300000022
Figure BDA0002499112300000022

Figure BDA0002499112300000031
Figure BDA0002499112300000031

酶切的时间为10min,温度为37℃。The digestion time was 10 min and the temperature was 37°C.

进一步,优选的是,连接体系为:Further, preferably, the connection system is:

Figure BDA0002499112300000032
Figure BDA0002499112300000032

进一步,优选的是,连接后产物转化入感受态细胞DH5ɑ中,在含100μg/mL氨苄青霉素的SOC固培养基涂布筛选培养,长出的单菌落扩大繁殖后提取质粒,即得到302a1-L4440重组质粒。其中,对于扩大繁殖的方法不做具体限制,优选为长出的单菌落后,用接种环挑取单菌落于含100μg/mL氨苄青霉素的SOC液体培养基的离心管中,摇床培养10小时提取质粒。Further, it is preferred that the connected product is transformed into the competent cell DH5ɑ, and the SOC solid medium containing 100 μg/mL ampicillin is coated and screened for culture, and the single colony that grows is expanded and propagated to extract the plasmid, i.e. to obtain 302a1-L4440. recombinant plasmids. Wherein, there is no specific limitation on the method of expanding reproduction, preferably after the single colony that grows out, pick a single colony with an inoculation loop and put it in a centrifuge tube containing 100 μg/mL ampicillin SOC liquid medium, and cultivate it on a shaking table for 10 hours. Extract the plasmid.

进一步,优选的是,步骤(2)的具体方法是:将步骤(1)得到的302a1-L4440重组质粒转化进入大肠杆菌感受态细胞HT115(DE3)菌株中,涂布于含100μg/mL氨苄青霉素和50μg/mL四环素的SOC固体培养基上,避光培养12h,挑取单菌落,得到302a1-L4440-HT115菌体;Further, preferably, the specific method of step (2) is: transform the 302a1-L4440 recombinant plasmid obtained in step (1) into Escherichia coli competent cell HT115 (DE3) strain, and coat it on the HT115 (DE3) strain containing 100 μg/mL ampicillin and 50 μg/mL tetracycline on the SOC solid medium, cultured in the dark for 12 h, and single colonies were picked to obtain 302a1-L4440-HT115 cells;

进一步,优选的是,步骤(3)的具体方法是:将302a1-L4440-HT115菌体于含100μg/mL氨苄青霉素和50μg/mL四环素的SOC液体培养基中,37℃避光培养10-12h,然后于含75μg/mL氨苄青霉素和12.5μg/mL四环素的2×YT液体培养基中摇床培养至OD600=0.38~0.42,加入IPTG诱导培养3~4h,获得含有白蜡虫302a1基因片段的dsRNA菌液。Further, preferably, the specific method of step (3) is: 302a1-L4440-HT115 bacterial cells are cultured in the SOC liquid medium containing 100 μg/mL ampicillin and 50 μg/mL tetracycline for 10-12 h at 37° C. , and then shaken in 2×YT liquid medium containing 75 μg/mL ampicillin and 12.5 μg/mL tetracycline to OD 600 =0.38-0.42, add IPTG to induce culture for 3-4 h, and obtain a dsRNA bacterial solution.

本发明提供一种单细胞克隆方式大量获得dsRNA的体系构建方法,介导白蜡虫的RNAi引起目的基因表达沉默。该方法以白蜡虫RNAi干扰为例,通过PCR的方式以白蜡虫cDNA为模板获得白蜡虫302a1目的基因片段,经过限制性内切酶修饰基因片段两端形成粘性末端,与相同方式经过限制性内切酶修饰形成线性的L4440质粒连接,形成含有白蜡虫目的基因片段的质粒302a1-L4440重组质粒。将302a1-L4440重组质粒转化进入大肠杆菌感受态HT115(DE3)菌株,形成302a1-L4440-HT1115菌株,该组合菌株同时具有氨苄和四环素抗性,不可合成RNA水解酶且含有白腊虫302a1基因片段,所以可通过单细胞克隆的方式,SOC液体培养基(含氨苄和四环素)摇床培养繁殖该大肠杆菌,其繁殖过程经过IPTG诱导可产生dsRNA,可大量获得含白蜡虫302a1基因片段的dsRNA,收集该重组大肠杆菌菌液,将菌液稀释后直接喷施在白蜡虫幼虫期虫体上。本发明方法可通过单细胞克隆大肠杆菌含有白蜡虫302a1目标基因,又通过此大肠杆菌自身次生代谢以及自我繁殖复制,获得含大量白蜡虫基因片段dsRNA的菌液,将含白蜡虫基因片段的dsRNA菌液喷施白蜡虫幼虫,从白蜡虫虫体表面进入体内,有效干扰目标基因表达量,为RNAi转染过程中因昆虫体积过小、无咀嚼式口器,不能采用微量注射的昆虫类型,合成大量的dsRNA且通过体表进入体内的RNAi转染途径提供参考。The invention provides a method for constructing a system for obtaining dsRNA in large quantities by single-cell cloning, which mediates the RNAi of the white wax worm to cause the silencing of target gene expression. In this method, the RNAi interference of P. elegans was taken as an example, and the target gene fragment of P. cinerea 302a1 was obtained by PCR using P. cinerea cDNA as a template, and the two ends of the gene fragment were modified by restriction endonucleases to form sticky ends. Dicer modified to form a linear L4440 plasmid ligation to form a plasmid 302a1-L4440 recombinant plasmid containing the target gene fragment of ashworm. The 302a1-L4440 recombinant plasmid was transformed into the E. coli competent HT115 (DE3) strain to form the 302a1-L4440-HT1115 strain, which was resistant to both ampicillin and tetracycline, could not synthesize RNA hydrolase and contained the 302a1 gene fragment of A. , so the Escherichia coli can be cultured and propagated by shaking the SOC liquid medium (containing ampicillin and tetracycline) by single-cell cloning, and its propagation process can be induced by IPTG to produce dsRNA, and a large amount of dsRNA containing the 302a1 gene fragment of the white wax worm can be obtained, The recombinant Escherichia coli bacterial liquid was collected, and the bacterial liquid was diluted and sprayed directly on the larvae of the white wax worm. According to the method of the invention, single-cell cloning of Escherichia coli containing the target gene of Escherichia coli 302a1, and through the secondary metabolism and self-reproduction and replication of the Escherichia coli, a bacterial liquid containing a large amount of dsRNA gene fragments of Escherichia coli can be obtained, The dsRNA bacterial solution is sprayed on the larvae of the white wax worm, and enters the body from the surface of the worm body, which effectively interferes with the expression of the target gene. It is an insect type that cannot be micro-injected during the RNAi transfection process due to the small size of the insect and no chewing mouthparts. , synthesizing a large amount of dsRNA and providing a reference for the RNAi transfection pathway into the body through the body surface.

本发明与现有技术相比,其有益效果为:Compared with the prior art, the present invention has the following beneficial effects:

本发明首次在白蜡虫RNA基因功能验证,引入单细胞克隆微生物大肠杆菌次,使其遗传物质中含有白蜡虫302a1基因片段,次生代谢中含有302a1基因片段的dsRNA,且没有RNA水解酶,通过大肠杆菌的繁殖和自我复制过程中使含有302a1基因片段的dsRNA得到富集。在研究对象过小,如本研究的白蜡虫体积小,不能移动的特点,RNAi转染过程中需要dsRNA喷施体表或者需要浸泡、喂食等dsRNA用量大的转染方式时,此方法可以提供大量的dsRNA,易于推广应用。The present invention is the first to verify the RNA gene function of P. elegans by introducing single-cell cloned microorganism Escherichia coli, so that its genetic material contains P. elegans 302a1 gene fragment, and the secondary metabolism contains dsRNA of the 302a1 gene fragment, and there is no RNA hydrolase. The dsRNA containing the 302a1 gene fragment was enriched during the propagation and self-replication of E. coli. When the research object is too small, such as the worms in this study are small in size and cannot move, when the RNAi transfection process requires dsRNA spraying on the body surface or transfection methods that require a large amount of dsRNA such as soaking and feeding, this method can provide A large number of dsRNAs are easy to popularize and apply.

以白蜡虫喷施实验为例,常规的RNAi实验采用试剂盒合成,单次合成的dsRNA量在20ul,浓度在0至1000ug/ml,(浓度高低与操作人员的熟练程度有关系),合成的dsRNA超低温保存不能超过1年;以试剂盒合成1ul dsRNA成本在3元至5元每ul,即1ml的成本在3000-5000元间;以一个基因为例,一次体外喷施实验需要60ml,那么试剂盒的合成就在18-30万元间,费用代价太大不可取;而采取单细胞克隆微生物大肠杆每个基因实验的费用是在800-1500元间,克隆改造过的大肠杆菌菌株,可以超低温保存2-3年,也可根据实验的要求扩大培养,超低温保存后期仍可以活化复苏重复使用,较大程度的降低实验成本。Taking the spraying experiment of ashworm as an example, conventional RNAi experiments are synthesized by kits, the amount of dsRNA synthesized in a single time is 20ul, and the concentration is 0 to 1000ug/ml, (the concentration is related to the operator's proficiency), the synthetic dsRNA can not be stored at ultra-low temperature for more than 1 year; the cost of synthesizing 1ul of dsRNA with the kit is 3 yuan to 5 yuan per ul, that is, the cost of 1ml is between 3000-5000 yuan; taking a gene as an example, an in vitro spraying experiment requires 60ml, then The synthesis of the kit is between 180,000 and 300,000 yuan, and the cost is too high. The cost of each gene experiment of single-cell cloned microorganism E. coli is between 800 and 1,500 yuan. The cloned E. coli strain, It can be stored in ultra-low temperature for 2-3 years, and can also be expanded according to the requirements of the experiment. In the later stage of ultra-low temperature storage, it can still be activated and recovered for repeated use, which greatly reduces the experimental cost.

附图说明Description of drawings

图1为体外大量获得dsRNA体系构建流程简图;Figure 1 is a schematic diagram of the construction process of the system for obtaining a large amount of dsRNA in vitro;

图2为PCR产物电泳图;其中,a为PCR扩增产物,条带处于250bp-500bp间;M为mark;b~f不同目的基因对照,由于对本发明不产生影响,对此本发明不做过多的披露;Fig. 2 is the electrophoresis diagram of PCR product; wherein, a is PCR amplification product, and the band is between 250bp-500bp; M is mark; excessive disclosure;

图3为L4440质粒双酶切前后对比电泳图;其中,a1:对照,环形L4440质粒(双酶切前);b1:线性L4440质粒(双酶切后);M:mark;由于质粒在双酶切前为环形,故电泳的移动速度非常慢,质粒双酶切后成线性处于2500bp-2000bp间;Figure 3 shows the electrophoresis images of the L4440 plasmid before and after double digestion; among them, a1: control, circular L4440 plasmid (before double digestion); b1: linear L4440 plasmid (after double digestion); M: mark; It is circular before cutting, so the moving speed of electrophoresis is very slow, and the plasmid is linear between 2500bp-2000bp after double enzyme digestion;

图4为302a1-L4440重组质粒转化进入大肠杆菌感受态细胞HT115(DE3)菌株中在含100μg/mL氨苄青霉素和50μg/mL四环素的SOC固体培养基上培养的图片;Figure 4 is a picture of 302a1-L4440 recombinant plasmid transformed into E. coli competent cell HT115 (DE3) strain and cultured on SOC solid medium containing 100 μg/mL ampicillin and 50 μg/mL tetracycline;

图5为诱导前后电泳图;其中,m:DNA分子Mark;a:诱导后;b:诱导前。Figure 5 is the electrophoresis diagram before and after induction; wherein, m: DNA molecule Mark; a: after induction; b: before induction.

具体实施方式Detailed ways

下面结合实施例对本发明作进一步的详细描述。The present invention will be further described in detail below in conjunction with the embodiments.

本领域技术人员将会理解,下列实施例仅用于说明本发明,而不应视为限定本发明的范围。实施例中未注明具体技术或条件者,按照本领域内的文献所描述的技术或条件或者按照产品说明书进行。所用材料或设备未注明生产厂商者,均为可以通过购买获得的常规产品。Those skilled in the art will understand that the following examples are only for illustrating the present invention and should not be construed as limiting the scope of the present invention. If no specific technology or condition is indicated in the examples, the technology or condition described in the literature in the field or the product specification is used. If the materials or equipment used are not marked with the manufacturer, they are all conventional products that can be obtained through purchase.

实施例1Example 1

一种体外大量获得白蜡虫双链RNA白蜡虫的方法,包括如下步骤:A method for obtaining a large amount of double-stranded RNA ash worms of ash worms in vitro, comprising the following steps:

步骤(1),提取白蜡虫总RNA并反转录为cDNA后进行PCR扩增,扩增产物与L4440载体质粒分别经SacI和SalI双酶切(图3),双酶切后产物利用T4连接酶4℃过夜连接,得到含302a1基因片段的重组质粒302a1-L4440;In step (1), the total RNA of the worm was extracted and reverse transcribed into cDNA, followed by PCR amplification. The amplified product and the L4440 vector plasmid were digested with SacI and SalI respectively (Figure 3), and the product after double digestion was connected by T4. The enzyme was ligated overnight at 4°C to obtain a recombinant plasmid 302a1-L4440 containing the 302a1 gene fragment;

步骤(2),将步骤(1)得到的302a1-L4440重组质粒转化进入大肠杆菌感受态细胞HT115(DE3)菌株中,涂布固体培养基筛选单菌落,得到302a1-L4440-HT115菌体;In step (2), the 302a1-L4440 recombinant plasmid obtained in step (1) is transformed into the Escherichia coli competent cell HT115 (DE3) strain, and the solid medium is coated to screen a single colony to obtain the 302a1-L4440-HT115 bacterial cell;

步骤(3),将步骤(2)获得的302a1-L4440-HT115菌体液体摇床培养至OD600=0.38,加入IPTG诱导,获得含有白蜡虫302a1基因片段的dsRNA菌液;Step (3), culturing the 302a1-L4440-HT115 bacterial cell liquid obtained in step (2) on a shaker to OD 600 =0.38, adding IPTG for induction, and obtaining a dsRNA bacterial liquid containing the 302a1 gene fragment of the waxworm;

步骤(4),将步骤(3)得到含有白蜡虫302a1基因片段的dsRNA菌液,浓缩菌液,用于RNA干扰实验。In step (4), the dsRNA bacterial solution obtained in step (3) containing the 302a1 gene fragment of the white wax worm is concentrated, and the bacterial solution is used for the RNA interference experiment.

实施例2Example 2

步骤(1),提取白蜡虫总RNA并反转录为cDNA后进行PCR扩增,扩增产物与L4440载体质粒分别经SacI和SalI双酶切(图3),双酶切后产物利用T4连接酶4℃过夜连接,得到含302a1基因片段的重组质粒302a1-L4440;In step (1), the total RNA of the worm was extracted and reverse transcribed into cDNA, followed by PCR amplification. The amplified product and the L4440 vector plasmid were digested with SacI and SalI respectively (Figure 3), and the product after double digestion was connected by T4. The enzyme was ligated overnight at 4°C to obtain a recombinant plasmid 302a1-L4440 containing the 302a1 gene fragment;

步骤(2),将步骤(1)得到的302a1-L4440重组质粒转化进入大肠杆菌感受态细胞HT115(DE3)菌株中,涂布固体培养基筛选单菌落,得到302a1-L4440-HT115菌体(图4);In step (2), the 302a1-L4440 recombinant plasmid obtained in step (1) was transformed into the E. coli competent cell HT115 (DE3) strain, and the solid medium was coated to screen a single colony to obtain 302a1-L4440-HT115 bacterial cells (Fig. 4);

步骤(3),将步骤(2)获得的302a1-L4440-HT115菌体液体摇床培养至OD600=0.42,加入IPTG诱导3.5h,获得含有白蜡虫302a1基因片段的dsRNA菌液;step (3), culturing the 302a1-L4440-HT115 bacterial cell liquid obtained in step (2) on a shaker to OD 600 =0.42, adding IPTG for induction for 3.5 h, and obtaining a dsRNA bacterial liquid containing the 302a1 gene fragment of the white waxworm;

步骤(4),将步骤(3)得到含有白蜡虫302a1基因片段的dsRNA菌液,浓缩菌液,用于RNA干扰实验。In step (4), the dsRNA bacterial solution obtained in step (3) containing the 302a1 gene fragment of the white wax worm is concentrated, and the bacterial solution is used for the RNA interference experiment.

步骤(1)中,所述的白蜡虫RNA包含白蜡虫302a1基因的总RNA。In step (1), the P. elegans RNA comprises the total RNA of P. elegans 302a1 gene.

所述的PCR扩增采用的引物为ECEGT01-F和ECEGT01-R;The primers that described PCR amplification adopts are ECEGT01-F and ECEGT01-R;

ECEGT01-F:5'-atgagctccgctctggtataaattcatttggac-3'(SEQ ID NO.6);ECEGT01-F: 5'-atgagctccgctctggtataaattcatttggac-3' (SEQ ID NO. 6);

ECEGT01-R:5'-atgtcgacgcctgttgaatcattatcactccta-3'(SEQ ID NO.7);ECEGT01-R: 5'-atgtcgacgcctgttgaatcattatcactccta-3' (SEQ ID NO. 7);

所述的PCR扩增体系为:Described PCR amplification system is:

Figure BDA0002499112300000061
Figure BDA0002499112300000061

PCR扩增程序为:94℃预变性5min;94℃变性30s,60℃退火30s,72℃延伸1min,30次循环;72℃延伸5min,4℃保存。The PCR amplification program was as follows: pre-denaturation at 94 °C for 5 min; denaturation at 94 °C for 30 s, annealing at 60 °C for 30 s, extension at 72 °C for 1 min, 30 cycles; extension at 72 °C for 5 min, and storage at 4 °C.

步骤(1)中,酶切的条件体系为:In step (1), the condition system of enzyme cleavage is:

Figure BDA0002499112300000062
Figure BDA0002499112300000062

酶切的时间为10min,温度为37℃。The digestion time was 10 min and the temperature was 37°C.

连接体系为:The connection system is:

Figure BDA0002499112300000063
Figure BDA0002499112300000063

Figure BDA0002499112300000071
Figure BDA0002499112300000071

连接后产物转化入感受态细胞DH5ɑ中,在含100μg/mL氨苄青霉素的SOC固培养基涂布筛选培养,长出的单菌落扩大繁殖后提取质粒,即得到302a1-L4440重组质粒。After the ligation, the product was transformed into competent cells DH5ɑ, and the SOC solid medium containing 100 μg/mL ampicillin was coated and screened for culture. The single colony that grew was expanded and propagated and the plasmid was extracted to obtain the 302a1-L4440 recombinant plasmid.

步骤(2)的具体方法是:将步骤(1)得到的302a1-L4440重组质粒转化进入大肠杆菌感受态细胞HT115(DE3)菌株中,涂布于含100μg/mL氨苄青霉素和50μg/mL四环素的SOC固体培养基上,避光培养12h,挑取单菌落,得到302a1-L4440-HT115菌体;The specific method of the step (2) is: transform the 302a1-L4440 recombinant plasmid obtained in the step (1) into the Escherichia coli competent cell HT115 (DE3) strain, and coat it on a liquid containing 100 μg/mL ampicillin and 50 μg/mL tetracycline. On SOC solid medium, culture in the dark for 12h, pick a single colony to obtain 302a1-L4440-HT115 cells;

步骤(3)的具体方法是:将302a1-L4440-HT115菌体于含100μg/mL氨苄青霉素和50μg/mL四环素的SOC液体培养基中,37℃避光培养10-12h,然后于含75μg/mL氨苄青霉素和12.5μg/mL四环素的2×YT液体培养基中摇床培养至OD600=0.42,加入IPTG诱导培养3h,获得含有白蜡虫302a1基因片段的dsRNA菌液。The specific method of step (3) is as follows: 302a1-L4440-HT115 cells are cultured in SOC liquid medium containing 100 μg/mL ampicillin and 50 μg/mL tetracycline at 37° C. for 10-12 h in the dark, and then cultured in 75 μg/mL SOC liquid medium containing 75 μg/mL tetracycline. mL ampicillin and 12.5 μg/mL tetracycline in 2×YT liquid medium were shaken and cultured to OD 600 =0.42, and IPTG was added to induce the culture for 3 h to obtain a dsRNA bacterial solution containing the 302a1 gene fragment of the white waxworm.

步骤(3)将获得的菌液进一步4℃离心浓缩菌体。In step (3), the obtained bacterial liquid was further centrifuged at 4°C to concentrate the bacterial cells.

应用实例Applications

实验涉及的所有培养基购买于生工生物工程(上海)股份有限公司,其中:All media involved in the experiment were purchased from Sangon Bioengineering (Shanghai) Co., Ltd., including:

SOC培养基组分:蛋白胨20.0g;酵母粉5.0g;氯化钠0.5g;七水硫酸镁5.0g;D-葡萄糖3.6g。SOC medium components: peptone 20.0 g; yeast powder 5.0 g; sodium chloride 0.5 g; magnesium sulfate heptahydrate 5.0 g; D-glucose 3.6 g.

SOC固体培养基组分:SOC培养基:34g,琼脂粉:12g,蒸馏水:1LSOC solid medium components: SOC medium: 34g, agar powder: 12g, distilled water: 1L

SOC液体培养基组分:SOC培养基:34g,蒸馏水:1LSOC liquid medium components: SOC medium: 34g, distilled water: 1L

含有氨苄青霉素的SOC固/液体培养基:1ml培养基中含有100μg的氨苄青霉素。SOC solid/liquid medium containing ampicillin: 1 ml of medium contains 100 μg of ampicillin.

含有氨苄青霉素和四环素的SOC固/液体培养基:1ml培养基中含有100μg的氨苄青霉素、含有50μg的四环素。SOC solid/liquid medium containing ampicillin and tetracycline: 1 ml of medium contains 100 μg of ampicillin and 50 μg of tetracycline.

2×YT培养基组分:酵母粉10.0g;蛋白胨16.0g;氯化钠5.0g。2×YT medium components: yeast powder 10.0g; peptone 16.0g; sodium chloride 5.0g.

含有氨苄青霉素和四环素的2×YT液体培养基中:每毫升培养基中含有75μg的氨苄青霉素,含有12.5μg的四环素。In 2×YT liquid medium containing ampicillin and tetracycline: 75 μg of ampicillin and 12.5 μg of tetracycline per ml of medium.

注:文中“/”代表“或”的意思。302a1基因是可以替换成任何想做干扰实验的基因。Note: "/" in the text means "or". The 302a1 gene can be replaced with any desired gene for interference experiments.

本发明是白蜡虫的基因功能验证中采用单细胞克隆微生物获得大量含白蜡虫基因片段dsRNA的方法,用于白蜡虫的RNAi体表喷施转染。本发明的目的1.探索如何在体外获得大量含白蜡虫基因片段dsRNA的体系构建方法;2.降低在RNAi实验中,常规试剂盒合成dsRNA的成本;3.一旦制备成功,可将改造过且含有白蜡虫基因的质粒低温保存,可反复做下游RNAi实验。基于这三个目的出发建立体外获得dsRNA的构建体系The invention is a method for obtaining a large amount of dsRNA containing the gene fragments of the ashworm by using single-cell cloned microorganisms in the verification of the gene function of the ashworm, which is used for the spraying and transfection of the body surface of the ashworm. Objectives of the present invention 1. To explore how to obtain a system construction method for obtaining a large amount of dsRNA containing ash worm gene fragments in vitro; 2. To reduce the cost of synthesizing dsRNA with conventional kits in RNAi experiments; 3. Once the preparation is successful, the modified and Plasmids containing the white wax worm gene are cryopreserved, and downstream RNAi experiments can be repeated. Based on these three purposes, a construction system for obtaining dsRNA in vitro was established

1重组载体的构建1 Construction of recombinant vector

利用RNA提取试剂盒(EZ-10Tatal RNA Minin-presps kit,生工生物工程(上海)股份有限公司)提取白蜡虫总RNA,其提取过程参照试剂盒说明书,并用反转录试剂盒(PrimeScriptTM RT reagent Kit with gDNA Eraser,Takara)反转录为cDNA。根据302a1基因片段序列设计引物ECEGT01-F:5'-atgagctccg ctctggtataaattcatttggac-3';ECEGT01-R:5'-atgtcgacgcctgttgaatcattatcactccta-3'。以cDNA为模板进行PCR扩增[Taq PCRMaster Mix(2X,with Red Dye),生工生物工程(上海)股份有限公司],PCR反应体系如表1所示。PCR反应条件为94℃预变性5min;94℃变性30s,60℃退火30s,72℃延伸1min,30次循环;72℃延伸5min,4℃保存。The total RNA was extracted by RNA extraction kit (EZ-10Tatal RNA Minin-presps kit, Sangon Bioengineering (Shanghai) Co., Ltd.), the extraction process was referring to the kit instructions, and reverse transcription kit (PrimeScript RT) was used to extract total RNA. reagent Kit with gDNA Eraser, Takara) was reverse transcribed into cDNA. Primers ECEGT01-F: 5'-atgagctccg ctctggtataaattcatttggac-3'; ECEGT01-R: 5'-atgtcgacgcctgttgaatcattatcactccta-3' were designed according to the sequence of the 302a1 gene fragment. cDNA was used as a template for PCR amplification [Taq PCRMaster Mix (2X, with Red Dye), Sangon Bioengineering (Shanghai) Co., Ltd.], and the PCR reaction system is shown in Table 1. PCR reaction conditions were pre-denaturation at 94°C for 5 min; denaturation at 94°C for 30 s, annealing at 60°C for 30 s, extension at 72°C for 1 min, 30 cycles; extension at 72°C for 5 min, and storage at 4°C.

表1Table 1

Taq PCR Master MixTaq PCR Master Mix 25.0μl,25.0 μl, cDNAcDNA 3.0μl,3.0 μl, ECEGT01-F 10μMECEGT01-F 10μM 2.0μl,2.0 μl, ECEGT01-R 10μMECEGT01-R 10μM 2.0μl,2.0 μl, dH<sub>2</sub>OdH<sub>2</sub>O 18.0μl,18.0 μl, 总计total 50.0μl。50.0 μl.

扩增片段的电泳检测结果显示介于250-500bp之间(图2),与预期相符。根据图1载体构建的流程,302a1基因片段胶回收产物和L4440载体经SacI和SalI(NEB(北京)有限公司)在37℃水浴中酶切10min,其反应体系如表2所示,分别电泳胶回收纯化酶切产物,酶切产物通过琼脂糖凝胶电泳检测(图3)。之后利用T4连接酶连接4℃过夜,得到302a1-L4440重组质粒。The electrophoresis detection results of the amplified fragments were between 250-500 bp (Figure 2), as expected. According to the process of vector construction in Figure 1, the 302a1 gene fragment gel recovery product and L4440 vector were digested with SacI and SalI (NEB (Beijing) Co., Ltd.) in a water bath at 37°C for 10 min. The reaction system is shown in Table 2. The cleavage product was recovered and purified, and the cleavage product was detected by agarose gel electrophoresis (Fig. 3). Then, T4 ligase was used for ligation at 4°C overnight to obtain the 302a1-L4440 recombinant plasmid.

表2Table 2

SacⅠSacⅠ 1.0μl,1.0 μl, SalⅠSalⅠ 1.0μl,1.0 μl, NE Buffer(10x)NE Buffer(10x) 5.0μl,5.0 μl, 扩增产物或L4440Amplification product or L4440 4.0μl,4.0 μl, dH<sub>2</sub>OdH<sub>2</sub>O 39.0μl,39.0 μl, 总计total 50.0μl。50.0 μl.

连接体系为:The connection system is:

Figure BDA0002499112300000091
Figure BDA0002499112300000091

将302a1和L4440质粒双酶切后连接转化到50μL DH5α感受态细胞中,涂布于含有氨苄青霉素的SOC固体培养基上,培养12h,挑取单菌落于SOC液体培养基中培养。经引物ECEGT01-F、ECEGT01-R和菌液直接PCR扩增,反应体系如表3所示,PCR反应条件:PCR反应条件为94℃预变性5min;94℃变性30s,60℃退火30s,72℃延伸1min,30次循环;72℃延伸5min,4℃保存。送公司测序,结果比对与目的片段吻合,302a1-L4440重组质粒已成功构建。The 302a1 and L4440 plasmids were double digested and transformed into 50 μL DH5α competent cells, spread on the SOC solid medium containing ampicillin, cultured for 12 h, and a single colony was picked and cultivated in the SOC liquid medium. The primers ECEGT01-F, ECEGT01-R and bacterial solution were used for direct PCR amplification. The reaction system was shown in Table 3. PCR reaction conditions: PCR reaction conditions were pre-denaturation at 94°C for 5 min; denaturation at 94°C for 30s, annealing at 60°C for 30s, and 72°C Extension at ℃ for 1 min, 30 cycles; extension at 72 ℃ for 5 min, and storage at 4 ℃. Sent to the company for sequencing, the results were consistent with the target fragment, and the 302a1-L4440 recombinant plasmid has been successfully constructed.

序列表SEQ ID NO.1~SEQ ID NO.5为PCR产物与302a1基因片段序列的比对;其中SEQ ID NO.1是以引物ECEGT01-F为模板测序PCR产物的序列;SEQ ID NO.2是以引物ECEGT01-R为模板测序PCR产物序列;SEQ ID NO.3~SEQ ID NO.5为302a1基因,由转录组数据(转录组数据只有外显子,无内含子)3个基因片段组成分别是>CL1378.Contig1_All、>CL1378.Contig2_All、>CL1378.Contig3_All。其中,SEQ ID NO.3~SEQ ID NO.5为302a1基因片段,下划线部分序列与SEQ ID NO.1和SEQ ID NO.2重合,PCR产物属于302a1基因片段,即扩征条带为所要的目的基因。Sequence Listing SEQ ID NO.1 to SEQ ID NO.5 are the alignment of the PCR product and the 302a1 gene fragment sequence; SEQ ID NO.1 is the sequence of the PCR product sequenced with the primer ECEGT01-F as the template; SEQ ID NO.2 The sequence of the PCR product was sequenced with the primer ECEGT01-R as the template; SEQ ID NO.3~SEQ ID NO.5 is the 302a1 gene, and the transcriptome data (transcriptome data only has exons, no introns) 3 gene fragments The compositions are >CL1378.Contig1_All, >CL1378.Contig2_All, >CL1378.Contig3_All, respectively. Among them, SEQ ID NO.3 to SEQ ID NO.5 are 302a1 gene fragments, the underlined partial sequence overlaps with SEQ ID NO.1 and SEQ ID NO.2, and the PCR product belongs to the 302a1 gene fragment, that is, the expansion band is the desired target gene.

2dsRNA的诱导表达Inducible expression of 2dsRNA

将步骤(1)得到的302a1-L4440重组质粒转化进入大肠杆菌感受态细胞HT115(DE3)菌株中,涂布于含100μg/mL氨苄青霉素和50μg/mL四环素的SOC固体培养基上,避光培养12h,挑取单菌落,得到302a1-L4440-HT115菌体;将302a1-L4440-HT115菌体于含100μg/mL氨苄青霉素和50μg/mL四环素的SOC液体培养基中,37℃避光培养10-12h,然后于含75μg/mL氨苄青霉素和12.5μg/mL四环素的2×YT液体培养基中摇床培养至OD600=0.4,加入IPTG诱导4h,收集菌体。诱导后的菌液提总RNA检测,结果如图5所示。凝胶电泳结果显示,诱导后302a1-L4440-HT115菌液提取的RNA比诱导前多一条RNA条带,而诱导前302a1-L4440-HT115菌液提取的RNA不含此条带,据此可以说明302a1基因片段的dsRNA诱导表达成功。The 302a1-L4440 recombinant plasmid obtained in step (1) was transformed into the Escherichia coli competent cell HT115 (DE3) strain, spread on the SOC solid medium containing 100 μg/mL ampicillin and 50 μg/mL tetracycline, and cultivated in the dark 12h, pick a single colony to obtain 302a1-L4440-HT115 cells; 302a1-L4440-HT115 cells were cultured in SOC liquid medium containing 100 μg/mL ampicillin and 50 μg/mL tetracycline at 37°C in the dark for 10- After 12h, the cells were shaken in 2×YT liquid medium containing 75μg/mL ampicillin and 12.5μg/mL tetracycline to OD 600 =0.4, induced by IPTG for 4h, and the cells were collected. After induction, the bacterial liquid was extracted for total RNA detection, and the results were shown in Figure 5. The results of gel electrophoresis showed that the RNA extracted from 302a1-L4440-HT115 bacterial solution after induction had one more RNA band than that before induction, while the RNA extracted from 302a1-L4440-HT115 bacterial solution before induction did not contain this band. The dsRNA-induced expression of the 302a1 gene fragment was successful.

其中,大量获得含白蜡虫302a1基因片段的dsRNA的菌液是:将构建好的302a1-L4440重组质粒转化到HT115感受态细胞中,涂布于含有氨苄青霉素和四环素的SOC固体培养基上,避光培养12h,挑取单菌至SOC液体培养基(含100μg/mL氨苄青霉素和50μg/mL四环素)37℃避光培养10-12h,然后置于2×YT液体培养基(含75μg/mL氨苄青霉素和12.5μg/mL四环素)培养至OD600=0.38~0.42。Among them, the bacterial solution to obtain a large amount of dsRNA containing the 302a1 gene fragment of the white wax worm is: transform the constructed 302a1-L4440 recombinant plasmid into HT115 competent cells, and spread it on the SOC solid medium containing ampicillin and tetracycline to avoid Incubate in light for 12 hours, pick single bacteria into SOC liquid medium (containing 100 μg/mL ampicillin and 50 μg/mL tetracycline), cultivate at 37°C for 10-12 hours in the dark, and then place in 2×YT liquid medium (containing 75 μg/mL ampicillin). Penicillin and 12.5 μg/mL tetracycline) were cultured to OD 600 =0.38-0.42.

结果:result:

所构建成体系形成的大肠杆菌302a1-L4440-HT115成功培养,经诱导得到含有目的302a1基因片段dsRNA,菌液的培养可根据需求扩大培养繁殖,获得所需的dsRNA菌液。The constructed Escherichia coli 302a1-L4440-HT115 was successfully cultured. After induction, dsRNA containing the target 302a1 gene fragment was obtained. The culture of the bacterial liquid can be expanded and propagated according to the needs to obtain the required dsRNA bacterial liquid.

以上显示和描述了本发明的基本原理、主要特征和本发明的优点。本行业的技术人员应该了解,本发明不受上述实施例的限制,上述实施例和说明书中描述的只是说明本发明的原理,在不脱离本发明精神和范围的前提下,本发明还会有各种变化和改进,这些变化和改进都落入要求保护的本发明范围内。本发明要求保护范围由所附的权利要求书及其等效物界定。The foregoing has shown and described the basic principles, main features and advantages of the present invention. Those skilled in the art should understand that the present invention is not limited by the above-mentioned embodiments, and the descriptions in the above-mentioned embodiments and the description are only to illustrate the principle of the present invention. Without departing from the spirit and scope of the present invention, the present invention will have Various changes and modifications fall within the scope of the claimed invention. The claimed scope of the present invention is defined by the appended claims and their equivalents.

Figure BDA0002499112300000101
Figure BDA0002499112300000101

Figure BDA0002499112300000111
Figure BDA0002499112300000111

Figure BDA0002499112300000121
Figure BDA0002499112300000121

Figure BDA0002499112300000131
Figure BDA0002499112300000131

Figure BDA0002499112300000141
Figure BDA0002499112300000141

Figure BDA0002499112300000151
Figure BDA0002499112300000151

序列表sequence listing

<110> 中国林业科学研究院资源昆虫研究所<110> Institute of Resource Insects, Chinese Academy of Forestry

<120> 一种体外大量获得白蜡虫dsRNA的体系构建方法<120> A method for constructing a system for obtaining a large amount of dsRNA from Astragalus in vitro

<160> 7<160> 7

<170> SIPOSequenceListing 1.0<170> SIPOSequenceListing 1.0

<210> 1<210> 1

<211> 416<211> 416

<212> DNA<212> DNA

<213> 人工序列()<213> artificial sequence()

<400> 1<400> 1

ggtggggcaa atattctggc agtcgacaag atacttgatt ttgtgtaata accatggtcc 60ggtggggcaa atattctggc agtcgacaag atacttgatt ttgtgtaata accatggtcc 60

ccgctggaac atgataattc gatagaatag catcttctga taaaattcta ccaatgccaa 120ccgctggaac atgataattc gatagaatag catcttctga taaaattcta ccaatgccaa 120

tagatacagg gttcatacga tgaatttccc tcataaacag ctttcgtgta aaccgatttt 180tagatacagg gttcatacga tgaatttccc tcataaacag ctttcgtgta aaccgatttt 180

tgtaacattt cttcagtaat tgattcgtcc gctgtcatta atttattcag ttctagaaac 240tgtaacattt cttcagtaat tgattcgtcc gctgtcatta atttattcag ttctagaaac 240

attttctctt gcttttcttc atttttagct aagtgataaa gagcaaaaga cgatgtataa 300attttctctt gcttttcttc atttttagct aagtgataaa gagcaaaaga cgatgtataa 300

gccatcgtat caataccagc gaggagaaaa tcaactatcg cgcctaagac atctttttca 360gccatcgtat caataccagc gaggagaaaa tcaactatcg cgcctaagac atctttttca 360

tctaaatttt catttttaag gaattgatct aggagtggta atgattaaac agaggg 416tctaaatttt catttttaag gaattgatct aggagtggta atgattaaac agaggg 416

<210> 2<210> 2

<211> 434<211> 434

<212> DNA<212> DNA

<213> 人工序列()<213> artificial sequence()

<400> 2<400> 2

gagggcgggg aaattcctta aaatgaaaat ttaggatgaa aaagatgtct taggcgcgat 60gagggcgggg aaattcctta aaatgaaaat ttaggatgaa aaagatgtct taggcgcgat 60

agttgatttt ctcctcgctg gtattgatac gatggcttat acatcgtctt ttgctcttta 120agttgatttt ctcctcgctg gtattgatac gatggcttat acatcgtctt ttgctcttta 120

tcacttagct aaaaatgaag aaaagcaaga gaaaatgttt ctagaactga ataaattaat 180tcacttagct aaaaatgaag aaaagcaaga gaaaatgttt ctagaactga ataaattaat 180

gacagcggac gaatcaatta ctgaagaaat gttacaaaaa tcggtttaca cgaaagctgt 240gacagcggac gaatcaatta ctgaagaaat gttacaaaaa tcggtttaca cgaaagctgt 240

tatgagggaa attcatcgta tgaaccctgt atctattggc attggtagaa ttttatcaga 300tatgagggaa attcatcgta tgaaccctgt atctattggc attggtagaa ttttatcaga 300

agatgctatt ctatcgaatt atcatgttcc agcggggacc atggttatta cacaaaatca 360agatgctatt ctatcgaatt atcatgttcc agcggggacc atggttatta cacaaaatca 360

agtatcttgt cgactgccag aatattttgc cagtccaaat gaatttatac cagagcggag 420agtatcttgt cgactgccag aatattttgc cagtccaaat gaatttatac cagagcggag 420

gagcatactt aagt 434gagcatactt aagt 434

<210> 3<210> 3

<211> 2292<211> 2292

<212> DNA<212> DNA

<213> 人工序列()<213> artificial sequence()

<400> 3<400> 3

ggctataaat gagatttcat caaaaatttc aacagtgtag aatttgttgg tccaaagaaa 60ggctataaat gagatttcat caaaaatttc aacagtgtag aatttgttgg tccaaagaaa 60

tgacacactg ccacagtaca aatgaaaaaa aggttaagta ctcattgaat cgataattta 120tgacacactg ccacagtaca aatgaaaaaa aggttaagta ctcattgaat cgataattta 120

cgttcttggc tgaaaatgaa tctgaacagg tttttccggt ttattaatca gcacggatac 180cgttcttggc tgaaaatgaa tctgaacagg tttttccggt ttattaatca gcacggatac 180

acaatccaaa tcgttaccca gccacttcag tttgaatttg tgaacaatgt tcatcaacaa 240acaatccaaa tcgttaccca gccacttcag tttgaatttg tgaacaatgt tcatcaacaa 240

aagttgtaag ttctgttctg ccaatcgacg agcaatacaa gtccggggcc cgtgtccgaa 300aagttgtaag ttctgttctg ccaatcgacg agcaatacaa gtccggggcc cgtgtccgaa 300

aggtaaaacc aagtacggat gtatttgttc gcttcctgat tctcgtaacc aacgctctgg 360aggtaaaacc aagtacggat gtatttgttc gcttcctgat tctcgtaacc aacgctctgg 360

tataaattca tttggactgg caaaatattc tggcagtcga caagatactt gattttgtgt 420tataaattca tttggactgg caaaatattc tggcagtcga caagatactt gattttgtgt 420

aataaccatg gtccccgctg gaacatgata attcgataga atagcatctt ctgataaaat 480aataaccatg gtccccgctg gaacatgata attcgataga atagcatctt ctgataaaat 480

tctaccaatg ccaatagata cagggttcat acgatgaatt tccctcataa cagctttcgt 540tctaccaatg ccaatagata cagggttcat acgatgaatt tccctcataa cagctttcgt 540

gtaaaccgat ttttgtaaca tttcttcagt aattgattcg tccgctgtca ttaatttatt 600gtaaaccgat ttttgtaaca tttcttcagt aattgattcg tccgctgtca ttaatttatt 600

cagttctaga aacattttct cttgcttttc ttcattttta gctaagtgat aaagagcaaa 660cagttctaga aacattttct cttgcttttc ttcattttta gctaagtgat aaagagcaaa 660

agacgatgta taagccatcg tatcaatacc agcgaggaga aaatcaacta tcgcgcctaa 720agacgatgta taagccatcg tatcaatacc agcgaggaga aaatcaacta tcgcgcctaa 720

gacatctttt tcatctaaat tttcattttt aaggaattga tctaggagtg ataatgattc 780gacatctttt tcatctaaat tttcattttt aaggaattga tctaggagtg ataatgattc 780

aacaggccgg tcgtccaagt tttttaattt tttatgcaaa aatttttgag caactatttc 840aacaggccgg tcgtccaagt ttttttaattt tttatgcaaa aatttttgag caactatttc 840

tatatatcta tgagctttgg aaaatttgcg atatgcagga gtattgaagt gtttccaaag 900tatatatcta tgagctttgg aaaatttgcg atatgcagga gtattgaagt gtttccaaag 900

ttgtaaccca ccgtctgtac gtgaaatcac actattcatg cacgcagccg cctcaatcaa 960ttgtaaccca ccgtctgtac gtgaaatcac actattcatg cacgcagccg cctcaatcaa 960

atttgatgtt tgcgagtttg gttccaattc aaattccgaa aaacagttga gcgattcatc 1020atttgatgtt tgcgagtttg gttccaattc aaattccgaa aaacagttga gcgattcatc 1020

gaaacagact aatcctatca attcgagaaa gagtcttgat agctccggca gaaaatcaga 1080gaaacagact aatcctatca attcgagaaa gagtcttgat agctccggca gaaaatcaga 1080

agactgatta ttggttcgaa ggtccaaaaa ctttttaata actccgtcgg tacgaggcag 1140agactgatta ttggttcgaa ggtccaaaaa ctttttaata actccgtcgg tacgaggcag 1140

atacaatctc acattctgaa ttttactaat atctttttga aatatcttcc ggatacgacc 1200atacaatctc acattctgaa ttttactaat atctttttga aatatcttcc ggatacgacc 1200

ccactctgga ccattcgtcg gtatgagacc tccagaatta tacaattccg gtctttcacg 1260ccactctgga ccattcgtcg gtatgagacc tccagaatta tacaattccg gtctttcacg 1260

gcgatatttt tctaaaataa gatgacttct tctctgcgga tatcgacctt cacaccgata 1320gcgatatttt tctaaaataa gatgacttct tctctgcgga tatcgacctt cacaccgata 1320

cacagcttct atgtcttcgg gtttgaaaac caagacgact gtaacacctg gtacaatttc 1380cacagcttct atgtcttcgg gtttgaaaac caagacgact gtaacacctg gtacaatttc 1380

ttctttaatg attgtcccga attgctgtaa tttttggaat ccatcgtgat gtaatttttt 1440ttctttaatg attgtcccga attgctgtaa tttttggaat ccatcgtgat gtaatttttt 1440

aaatccataa ttgccaatca ctggcaagta aatctcaagg gtcctaatga aggaaagtga 1500aaatccataa ttgccaatca ctggcaagta aatctcaagg gtcctaatga aggaaagtga 1500

tttaggacca ggtatcgcat caaatggctt aatctcgctg gtgaaggtac agaaattcag 1560tttaggacca ggtatcgcat caaatggctt aatctcgctg gtgaaggtac agaaattcag 1560

tctaggaaac caacaatata atttcttcac atgcattatt tttactatca taaaattcga 1620tctaggaaac caacaatata atttcttcac atgcattatt tttactatca taaaattcga 1620

aaaaaattca tcattgaaaa ttattgtcaa taaagcatcc gaaaaaataa tacgtaaaaa 1680aaaaaattca tcattgaaaa ttattgtcaa taaagcatcc gaaaaaataa tacgtaaaaa 1680

tatgcgtgag ttttaaatga caatccaaaa cagaatagaa aaaacaattc aaaaacaaat 1740tatgcgtgag ttttaaatga caatccaaaa cagaatagaa aaaacaattc aaaaacaaat 1740

atagaaagat tgaactacgt attaggaatt gtaaaaatga aaacaaaaca aaacgacgca 1800atagaaagat tgaactacgt attaggaatt gtaaaaatga aaacaaaaca aaacgacgca 1800

ccttaaatta aaaacatatt ttttcactca catatacgac acgtaagttt acataattta 1860ccttaaatta aaaacatatt ttttcactca catatacgac acgtaagttt acataattta 1860

catatttgaa aatcagaatt aacagaaact atttgtttct tgattattca gtatactact 1920catatttgaa aatcagaatt aacagaaact atttgtttct tgattattca gtatactact 1920

gagtgctccc tcgatttgtt caagtccttt ccttaaaaag cgatcaaatt taacgcatgt 1980gagtgctccc tcgatttgtt caagtccttt ccttaaaaag cgatcaaatt taacgcatgt 1980

acagtattag atgatggcca cagttttcaa tgcctctgat tacctatact ctgttcatat 2040acagtattag atgatggcca cagttttcaa tgcctctgat tacctatact ctgttcatat 2040

gcctgtaaat atacacttgc acttgcatgt ggagaaaata ttttgagcaa attaatacgt 2100gcctgtaaat atacacttgc acttgcatgt ggagaaaata ttttgagcaa attaatacgt 2100

caaatagtat tataatatta cattttcgtt aacactcact cacagtccta caatggcagt 2160caaatagtat tataatatta cattttcgtt aacactcact cacagtccta caatggcagt 2160

agggtagaga tgctgattga ggaatcagta atgccgggct cgaatcctac caagggcaac 2220agggtagaga tgctgattga ggaatcagta atgccgggct cgaatcctac caagggcaac 2220

gttttataaa catttttttt gttttaagat aaattttttt ttttaaaatg gttattagat 2280gttttataaa cattttttttt gttttaagat aaatttttttt ttttaaaatg gttattagat 2280

tctctgtttt tt 2292tctctgtttt tt 2292

<210> 4<210> 4

<211> 395<211> 395

<212> DNA<212> DNA

<213> 人工序列()<213> artificial sequence()

<400> 4<400> 4

attcatcgaa acagactatt cctatcaatt ccaaaaaaag tcttgatagt tctggcaaaa 60attcatcgaa acagactatt cctatcaatt ccaaaaaaag tcttgatagt tctggcaaaa 60

aatcttaaaa ttgagtatta gctcgaagat ccaaaaactt tttaataact tcgtcggtac 120aatcttaaaa ttgagtatta gctcgaagat ccaaaaactt tttaataact tcgtcggtac 120

gcggcagata caatcttaca ttcggaattt tactaatacc tttttgaaat attttccgga 180gcggcagata caatcttaca ttcggaattt tactaatacc tttttgaaat attttccgga 180

tacgacccca ctctgaacca ttcctcggta ttagacaccc agaatttcat aattcccgtc 240tacgacccca ctctgaacca ttcctcggta ttagacaccc agaatttcat aattcccgtc 240

tttcaaggct atatttttct aaaataagat gacttcttct ctgcggatat cgaccttcgc 300tttcaaggct atatttttct aaaataagat gacttcttct ctgcggatat cgaccttcgc 300

atcgatacac agcttctatg tttttgggtt tgaaaaccta gacaacagta acacctggta 360atcgatacac agcttctatg tttttgggtt tgaaaaccta gacaacagta acacctggta 360

caatttcttc ctttaataac tgtctcgaat tgctg 395caatttcttc ctttaataac tgtctcgaat tgctg 395

<210> 5<210> 5

<211> 4904<211> 4904

<212> DNA<212> DNA

<213> 人工序列()<213> artificial sequence()

<400> 5<400> 5

gttgaatttt taatctacgt tcgaaatttt attcagcgtg ttagtttttg cccgaagtat 60gttgaatttt taatctacgt tcgaaatttt attcagcgtg ttagtttttg cccgaagtat 60

tattggatgg ccgaaagatt ggttgatcga ttgcataatg aattaataaa actgcggttg 120tattggatgg ccgaaagatt ggttgatcga ttgcataatg aattaataaa actgcggttg 120

ttatgcggga cggtagataa cttaccggat tatatagtga attactcggc cagtagtgct 180ttatgcggga cggtagataa cttaccggat tatatagtga attactcggc cagtagtgct 180

gggaatcgta atacgcagcc gtcatatcat ttatttcatt gtcacctcga tataaagtgg 240gggaatcgta atacgcagcc gtcatatcat ttatttcatt gtcacctcga tataaagtgg 240

ttacacatta cgcttttgta tcaattaatt gtaataaaac agagacttgg aactgaaaaa 300ttacacatta cgcttttgta tcaattaatt gtaataaaac agagacttgg aactgaaaaa 300

tcttccgaag aatatgaaac ttctttgaat tttcgtgcat tagataactt cgttgagctc 360tcttccgaag aatatgaaac ttctttgaat tttcgtgcat tagataactt cgttgagctc 360

ctgatgtcag atttaattat cattactctc aaaagatttc aacagatttc catcgacgat 420ctgatgtcag atttaattat cattactctc aaaagatttc aacagatttc catcgacgat 420

cttgctgtta aatcgttatt tacgtgtact tgcgtacgag aaatgtggaa gctgctgcag 480cttgctgtta aatcgttatt tacgtgtact tgcgtacgag aaatgtggaa gctgctgcag 480

ctaagtgttg accatcttca taggcgcggt ttcatatcga atttctggca ttttgtgaac 540ctaagtgttg accatcttca taggcgcggt ttcatatcga atttctggca ttttgtgaac 540

cgaatttgtg ataaaattgc attaaacagt gttattcaaa cagactacaa tgattgttca 600cgaatttgtg ataaaattgc attaaacagt gttattcaaa cagactacaa tgattgttca 600

atgttaaaaa tgccgcaaac ctactcttct tcccatccat ctatgtttgt ggtttggttg 660atgttaaaaa tgccgcaaac ctactcttct tcccatccat ctatgtttgt ggtttggttg 660

ttgaaacact taataaaatt gtggagctct ggtgaaaaac tggaaattga atccaattat 720ttgaaacact taataaaatt gtggagctct ggtgaaaaac tggaaattga atccaattat 720

ttgcttttag aaaatgcaat aaaaatatgc gtaaattcgg aaccagctga atcctgtttg 780ttgcttttag aaaatgcaat aaaaatatgc gtaaattcgg aaccagctga atcctgtttg 780

cgtgttttcc tattttttgt ggaaaatatt ttgaattctg attgggaaat gcgaactgag 840cgtgttttcc tattttttgt ggaaaatatt ttgaattctg attgggaaat gcgaactgag 840

ccacttgtac ttctttggga gtattttaac aaaaagctta attccttgtt ttacattcct 900ccacttgtac ttctttggga gtattttaac aaaaagctta attccttgtt ttacattcct 900

ggatcgtcga ttagtggaat tgctgtcatg agcaaaagtg catcaggctt attgacgcag 960ggatcgtcga ttagtggaat tgctgtcatg agcaaaagtg catcaggctt attgacgcag 960

ttgaacaata aattagaaca atttgtttta gacaaaaata tggacagttt tcatttgttt 1020ttgaacaata aattagaaca atttgtttta gacaaaaata tggacagttt tcatttgttt 1020

cttcgattac tgggaagaaa cttgaaaaaa tggcgtgaca attcgcgctt ttggaaccaa 1080cttcgattac tgggaagaaa cttgaaaaaa tggcgtgaca attcgcgctt ttggaaccaa 1080

ttaaaaggtc gtatatactc caagttttca gcttccaagt tatcatccct gaatgagatc 1140ttaaaaggtc gtatatactc caagttttca gcttccaagt tatcatccct gaatgagatc 1140

ggattgtatc attttgtatc gttattttta actttggctc ttaccaccga tctcaatgaa 1200ggattgtatc attttgtatc gttattttta actttggctc ttaccaccga tctcaatgaa 1200

gtgagcaaga agttgcaatc cttcctcaac ttacttattg cagaaaatct tgatgaagct 1260gtgagcaaga agttgcaatc cttcctcaac ttacttattg cagaaaatct tgatgaagct 1260

cgattaaaat tagtctggaa agctcatata gctttgattt tattgtttgc cgagaacaac 1320cgattaaaat tagtctggaa agctcatata gctttgattt tattgtttgc cgagaacaac 1320

ctagatataa gcattgtgtc gaatccatta atggatatgg tagaaacagc cgtacagcta 1380ctagatataa gcattgtgtc gaatccatta atggatatgg tagaaacagc cgtacagcta 1380

ccaaattgct tgagtttaat gagggtattt ttggaggggt ttcaagattt gatagattgc 1440ccaaattgct tgagtttaat gagggtattt ttggaggggt ttcaagattt gatagattgc 1440

acaaataatt tggaactggg gcagtacatt tttatcggaa actggatttc ttcctatctt 1500acaaataatt tggaactggg gcagtacatt tttatcggaa actggatttc ttcctatctt 1500

tcgcaatgca atgaatcgga ttcgaatagg tttctggaga ctatatcggt attaatcaat 1560tcgcaatgca atgaatcgga ttcgaatagg tttctggaga ctatatcggt attaatcaat 1560

aaactgaatt ctctaatgtc agctcagtta ccacttggtc aagacaatca attgatcctt 1620aaactgaatt ctctaatgtc agctcagtta ccacttggtc aagacaatca attgatcctt 1620

atgtataatg cattatggga acacttggta ccgtatttga aaaaaataat gagctccgcg 1680atgtataatg cattatggga acacttggta ccgtatttga aaaaaataat gagctccgcg 1680

tcgaacaatt cttaccaggt accggatatt gctgccacac ttaccacatt atcattcaaa 1740tcgaacaatt cttaccaggt accggatatt gctgccacac ttaccacatt atcattcaaa 1740

tcttgttttc ctctcagtac tagaaatcgg gctgtagact tactaacagt tttcgttagt 1800tcttgttttc ctctcagtac tagaaatcgg gctgtagact tactaacagt tttcgttagt 1800

cacgattcaa ttgatgtcag gttgttatgt cgttatctta gccaagtatc gcgttccatg 1860cacgattcaa ttgatgtcag gttgttatgt cgttatctta gccaagtatc gcgttccatg 1860

cattcgcatt tattaaataa ttttagcatt actttgatca agggatggtt aagatgcctt 1920cattcgcatt tattaaataa ttttagcatt actttgatca agggatggtt aagatgcctt 1920

attcttctat cgagcgatga agagttagaa gaggatctcg ctagatttac cacatttatc 1980attcttctat cgagcgatga agagttagaa gaggatctcg ctagatttac cacatttatc 1980

accacgttac ccgaaataca aaaactattt tcagaaacac aaatcaccct gaatctgcat 2040accacgttac ccgaaataca aaaactattt tcagaaacac aaatcaccct gaatctgcat 2040

tcagattatt ttgagaattt tctcatggca ttgcagttga aatactcatc acttcaagat 2100tcagattatt ttgagaattt tctcatggca ttgcagttga aatactcatc acttcaagat 2100

ttccattcaa aaaataagtt tagtagccaa gtatggtcgt atttcgctaa tattgagcga 2160ttccattcaa aaaataagtt tagtagccaa gtatggtcgt atttcgctaa tattgagcga 2160

tggctgttgc atttagtaaa aattcctaaa tcaataaatt tggccatgaa tatttaccga 2220tggctgttgc atttagtaaa aattcctaaa tcaataaatt tggccatgaa tatttaccga 2220

aacgttggac agatgttttt taagattccg gaaatgctgt acactaagtc tcgtccaaat 2280aacgttggac agatgttttt taagattccg gaaatgctgt acactaagtc tcgtccaaat 2280

agtttgctgc agtctttttt ggatttatta cttttaccga tacaaattcg aaatcccgag 2340agtttgctgc agtcttttttt ggatttatta cttttaccga tacaaattcg aaatcccgag 2340

tttaaactta attgtcattt aagcgatgcg ataaaaaaat actttctact tgttcatttg 2400tttaaactta attgtcattt aagcgatgcg ataaaaaaat actttctact tgttcatttg 2400

tggtcttttc aaattaggtt ggtgaacagt tttctctgtt caagtgtttt gaattctcgg 2460tggtcttttc aaattaggtt ggtgaacagt tttctctgtt caagtgtttt gaattctcgg 2460

aacgctttga attaactagt aaatcaatta ttgaaatact atgctgcgca tttttaagaa 2520aacgctttga attaactagt aaatcaatta ttgaaatact atgctgcgca tttttaagaa 2520

agcgagccaa aacacctcac caatacgctt ttcaaacatt aattttcctc aataatctca 2580agcgagccaa aacacctcac caatacgctt ttcaaacatt aattttcctc aataatctca 2580

tcagattaca caaaaataac gacgctgttg taaaatgttt tataaaaaat gctctggaga 2640tcagattaca caaaaataac gacgctgttg taaaatgttt tataaaaaat gctctggaga 2640

ggatatgtga tgtcgtaatg ttctgtgaag atattagtcc ctgtaaaaaa gaggcaaaag 2700ggatatgtga tgtcgtaatg ttctgtgaag atattagtcc ctgtaaaaaa gaggcaaaag 2700

atatattgca gtttaccttg gatttaaata ttcttcgaag tgaatcagat gttggaaatt 2760atatattgca gtttaccttg gatttaaata ttcttcgaag tgaatcagat gttggaaatt 2760

ttttaatcga agtgttcggt aaactctgtc aagagcatct agctttcaat tcgggaaact 2820ttttaatcga agtgttcggt aaactctgtc aagagcatct agctttcaat tcgggaaact 2820

tattcgattt gttcgaggaa attatttccg tagctccgga ttcagtggct cgatttttac 2880tattcgattt gttcgaggaa attatttccg tagctccgga ttcagtggct cgatttttac 2880

cgcagtttag agaaaaaatc aaagaagttg aacataaacg aggtgttgga tttgatcgtt 2940cgcagtttag agaaaaaatc aaagaagttg aacataaacg aggtgttgga tttgatcgtt 2940

cgttaaggaa aggacttgaa cgaatcgagg aagcactcgg tagtatacgg aataatcaaa 3000cgttaaggaa aggacttgaa cgaatcgagg aagcactcgg tagtatacgg aataatcaaa 3000

gaacaaatag tttctgttaa ttcagatttt caaatatgta aattatgtaa acttatgtgt 3060gaacaaatag tttctgttaa ttcagatttt caaatatgta aattatgtaa acttatgtgt 3060

cgtatatgtg agtgaaaaaa tatatgtttt taatttaagg agcgtcgttt taatttgttt 3120cgtatatgtg agtgaaaaaa tatatgtttt taatttaagg agcgtcgttt taatttgttt 3120

tcatttttac aattcccaat acgtagttca atgctttcta tatttgtttt tgaattgttt 3180tcatttttac aattcccaat acgtagttca atgctttcta tatttgtttt tgaattgttt 3180

tttctattct gttttggatt gtcatttaaa actcacgcat atttttacgt attatttttt 3240tttctattct gttttggatt gtcatttaaa actcacgcat atttttacgt atttttttt 3240

cggatgcttt attgacaata attttcaatg atgaattttt ttcgaatttt atgatagtaa 3300cggatgcttt attgacaata attttcaatg atgaattttt ttcgaatttt atgatagtaa 3300

aaataatgca tgtgaagaaa ttatattgtt ggtttcctag actgaatttc tgtaccttca 3360aaataatgca tgtgaagaaa ttatattgtt ggtttcctag actgaatttc tgtaccttca 3360

ccagcgagat taagccattt gatgcgatac ctggtcctaa atcactttcc ttcattagga 3420ccagcgagat taagccattt gatgcgatac ctggtcctaa atcactttcc ttcattagga 3420

cccttgagat ttacttgcca gtgattggca attatggatt taaaaaatta catcacgatg 3480cccttgagat ttacttgcca gtgattggca attatggatt taaaaaatta catcacgatg 3480

gattccaaaa attacagcaa ttcgggacaa tcattaaaga agaaattgta ccaggtgtta 3540gattccaaaa attacagcaa ttcgggacaa tcattaaaga agaaattgta ccaggtgtta 3540

cagtcgtctt ggttttcaaa cccgaagaca tagaagctgt gtatcggtgt gaaggtcgat 3600cagtcgtctt ggttttcaaa cccgaagaca tagaagctgt gtatcggtgt gaaggtcgat 3600

atccgcagag aagaagtcat cttattttag aaaaatatcg ccgtgaaaga ccggaattgt 3660atccgcagag aagaagtcat cttattttag aaaaatatcg ccgtgaaaga ccggaattgt 3660

ataattctgg aggtctcata ccgacgaatg gtccagagtg gggtcgtatc cggaagatat 3720ataattctgg aggtctcata ccgacgaatg gtccagagtg gggtcgtatc cggaagatat 3720

ttcaaaaaga tattagtaaa attcagaatg tgagattgta tctgcctcgt accgacggag 3780ttcaaaaaga tattagtaaa attcagaatg tgagattgta tctgcctcgt accgacggag 3780

ttattaaaaa gtttttggac cttcgaacca ataatcagtc ttctgatttt ctgccggagc 3840ttattaaaaa gtttttggac cttcgaacca ataatcagtc ttctgatttt ctgccggagc 3840

tatcaagact ctttctcgaa ttgataggat tagtctgttt cgatgaatcg ctcaactgtt 3900tatcaagact ctttctcgaa ttgataggat tagtctgttt cgatgaatcg ctcaactgtt 3900

tttcggaatt tgaattggaa ccaaactcgc aaacatcaaa tttgattgag gcggctgcgt 3960tttcggaatt tgaattggaa ccaaactcgc aaacatcaaa tttgattgag gcggctgcgt 3960

gcatgaatag tgtgatttca cgtacagacg gtgggttaca actttggaaa cacttcaata 4020gcatgaatag tgtgatttca cgtacagacg gtgggttaca actttggaaa cacttcaata 4020

ctcctgcata tcgcaaattt tccaaagctc atagatatat agaaatagtt gctcaaaaat 4080ctcctgcata tcgcaaattt tccaaagctc atagatatat agaaatagtt gctcaaaaat 4080

ttttgcataa aaaattaaaa aacttggacg accggcctgt tgaatcatta tcactcctag 4140ttttgcataa aaaattaaaa aacttggacg accggcctgt tgaatcatta tcactcctag 4140

atcaattcct taaaaatgaa aatttagatg aaaaagatgt cttaggcgcg atagttgatt 4200atcaattcct taaaaatgaa aatttagatg aaaaagatgt cttaggcgcg atagttgatt 4200

ttctcctcgc tggtattgat acgatggctt atacatcgtc ttttgctctt tatcacttag 4260ttctcctcgc tggtattgat acgatggctt atacatcgtc ttttgctctt tatcacttag 4260

ctaaaaatga agaaaagcaa gagaaaatgt ttctagaact gaataaatta atgacagcgg 4320ctaaaaatga agaaaagcaa gagaaaatgt ttctagaact gaataaatta atgacagcgg 4320

acgaatcaat tactgaagaa atgttacaaa aatcggttta cacgaaagct gttatgaggg 4380acgaatcaat tactgaagaa atgttacaaa aatcggttta cacgaaagct gttatgaggg 4380

aaattcatcg tatgaaccct gtatctattg gcattggtag aattttatca gaagatgcta 4440aaattcatcg tatgaaccct gtatctattg gcattggtag aattttatca gaagatgcta 4440

ttctatcgaa ttatcatgtt ccagcgggga ccatggttat tacacaaaat caagtatctt 4500ttctatcgaa ttatcatgtt ccagcgggga ccatggttat tacacaaaat caagtatctt 4500

gtcgactgcc agaatatttt gccagtccaa atgaatttat accagagcgt tggttacgag 4560gtcgactgcc agaatatttt gccagtccaa atgaatttat accagagcgt tggttacgag 4560

aatcaggaag cgaacaaata catccgtact tggttttacc tttcggacac gggccccgga 4620aatcaggaag cgaacaaata catccgtact tggttttacc tttcggacac gggccccgga 4620

cttgtattgc tcgtcgattg gcagaacaga acttacaact tttgttgatg aacattgttc 4680cttgtattgc tcgtcgattg gcagaacaga acttacaact tttgttgatg aacattgttc 4680

acaaattcaa actgaagtgg ctgggtaacg atttggattg tgtatccgtg ctgattaata 4740acaaattcaa actgaagtgg ctgggtaacg atttggattg tgtatccgtg ctgattaata 4740

aaccggaaaa acctgttcag attcattttc agccaagaac gtaaattatc gattcaatga 4800aaccggaaaa acctgttcag attcattttc agccaagaac gtaaattatc gattcaatga 4800

gtacttaacc tttttttcat ttgtactgtg gcagtgtgtc atttctttgg accaacaaat 4860gtacttaacc tttttttcat ttgtactgtg gcagtgtgtc atttctttgg accaacaaat 4860

tctacactgt tgaaattttt gatgaaatct catttatagc caat 4904tctacactgt tgaaattttt gatgaaatct catttatagc caat 4904

<210> 6<210> 6

<211> 33<211> 33

<212> DNA<212> DNA

<213> 人工序列()<213> artificial sequence()

<400> 6<400> 6

atgagctccg ctctggtata aattcatttg gac 33atgagctccg ctctggtata aattcatttg gac 33

<210> 7<210> 7

<211> 33<211> 33

<212> DNA<212> DNA

<213> 人工序列()<213> artificial sequence()

<400> 7<400> 7

atgtcgacgc ctgttgaatc attatcactc cta 33atgtcgacgc ctgttgaatc attatcactc cta 33

Claims (9)

1.一种体外大量获得白蜡虫dsRNA的体系构建方法,其特征在于,包括如下步骤:1. a system construction method that obtains a large amount of ash worm dsRNA in vitro, is characterized in that, comprises the steps: 步骤(1),提取白蜡虫总RNA并反转录为cDNA后进行PCR扩增,扩增产物与L4440载体质粒分别经SacI和SalI双酶切,双酶切后产物利用T4连接酶4℃过夜连接,得到含302a1基因片段的重组质粒302a1-L4440;Step (1), extract the total RNA of the white wax worm and reverse-transcribe it into cDNA, and then carry out PCR amplification. The amplified product and the L4440 vector plasmid were double digested with SacI and SalI respectively, and the double digested product was digested with T4 ligase overnight at 4°C connected to obtain a recombinant plasmid 302a1-L4440 containing the 302a1 gene fragment; 步骤(2),将步骤(1)得到的302a1-L4440重组质粒转化进入大肠杆菌感受态细胞HT115(DE3)菌株中,涂布固体培养基筛选单菌落,得到302a1-L4440-HT115菌体;In step (2), the 302a1-L4440 recombinant plasmid obtained in step (1) is transformed into the E. coli competent cell HT115 (DE3) strain, and the solid medium is coated to screen a single colony to obtain the 302a1-L4440-HT115 cell; 步骤(3),将步骤(2)获得的302a1-L4440-HT115菌体液体摇床培养至OD600=0.38-0.42,加入IPTG诱导,获得含有白蜡虫302a1基因片段的dsRNA菌液;step (3), culturing the 302a1-L4440-HT115 bacterial cell liquid obtained in step (2) on a shaker to OD 600 =0.38-0.42, adding IPTG for induction, and obtaining a dsRNA bacterial liquid containing the 302a1 gene fragment of P. chinensis; 步骤(4),将步骤(3)得到含有白蜡虫302a1基因片段的dsRNA菌液,浓缩菌液,用于RNA干扰实验。In step (4), the dsRNA bacterial solution obtained in step (3) containing the 302a1 gene fragment of the white wax worm is concentrated, and the bacterial solution is used for the RNA interference experiment. 2.根据权利要求1所述的体外大量获得白蜡虫dsRNA的体系构建方法,其特征在于,所述的白蜡虫总RNA包含中白蜡虫302a1基因的总RNA。2. The system construction method for obtaining a large amount of dsRNA in vitro according to claim 1, characterized in that, the total RNA of described ash worm comprises the total RNA of the 302a1 gene of ash worm. 3.根据权利要求1所述的体外大量获得白蜡虫dsRNA的体系构建方法,其特征在于,所述的PCR扩增采用的引物为ECEGT01-F和ECEGT01-R;3. the system construction method that obtains in vitro a large amount of white wax worm dsRNA according to claim 1, is characterized in that, the primer that described PCR amplification adopts is ECEGT01-F and ECEGT01-R; ECEGT01-F:5'-atgagctccgctctggtataaattcatttggac-3'(SEQ ID NO.6);ECEGT01-F: 5'-atgagctccgctctggtataaattcatttggac-3' (SEQ ID NO. 6); ECEGT01-R:5'-atgtcgacgcctgttgaatcattatcactccta-3'(SEQ ID NO.7)。ECEGT01-R: 5'-atgtcgacgcctgttgaatcattatcactccta-3' (SEQ ID NO. 7). 4.根据权利要求1所述的体外大量获得白蜡虫dsRNA的体系构建方法,其特征在于,步骤(1)中,所述的PCR扩增体系为:4. The system construction method for obtaining a large amount of dsRNA in vitro according to claim 1, characterized in that, in step (1), the PCR amplification system is: Taq PCR Master Mix(2X, with Red Dye) 25.0μl,Taq PCR Master Mix (2X, with Red Dye) 25.0μl, cDNA 3.0μl,cDNA 3.0 μl, ECEGT01-F 10μM 2.0μl,ECEGT01-F 10 μM 2.0 μl, ECEGT01-R 10μM 2.0μl,ECEGT01-R 10 μM 2.0 μl, ddH2O 18.0μl, ddH2O 18.0 μl, 总计 50.0μl;Total 50.0μl; PCR扩增程序为:94℃预变性5min;94℃变性30s,60℃退火30s,72℃延伸1min,30次循环;72℃延伸5min,4℃保存。The PCR amplification program was as follows: pre-denaturation at 94 °C for 5 min; denaturation at 94 °C for 30 s, annealing at 60 °C for 30 s, extension at 72 °C for 1 min, 30 cycles; extension at 72 °C for 5 min, and storage at 4 °C. 5.根据权利要求1所述的体外大量获得白蜡虫dsRNA的体系构建方法,其特征在于,步骤(1)中,酶切的条件体系为:5. The system construction method for obtaining a large amount of dsRNA in vitro according to claim 1, characterized in that, in step (1), the conditional system for enzyme cleavage is: SacⅠ 1.0 μl,SacⅠ 1.0 μl, SalⅠ 1.0 μl,SalⅠ 1.0 μl, NE Buffer(10x) 5.0 μl,NE Buffer (10x) 5.0 μl, 扩增产物或L4440 4.0 μl,Amplification product or L4440 4.0 μl, dH2O 39.0 μl,dH 2 O 39.0 μl, 总计 50.0 μl;50.0 μl total; 酶切的时间为10min,温度为37℃。The digestion time was 10 min and the temperature was 37°C. 6.根据权利要求1所述的体外大量获得白蜡虫dsRNA的体系构建方法,其特征在于,连接体系为:6. the system construction method that obtains in vitro a large amount of ash worm dsRNA according to claim 1, it is characterised in that the connection system is: 酶切后的扩增产物 4.0ul,4.0ul of amplified product after digestion, 酶切后的L4440 1.0ul,L4440 1.0ul after digestion, T4酶 1.0ul,T4 enzyme 1.0ul, T4 Buffer 2.5ul,T4 Buffer 2.5ul, H2O 11.5ul, H2O 11.5ul, 总计 20.0ul。20.0ul in total. 7.根据权利要求1所述的体外大量获得白蜡虫dsRNA的体系构建方法,其特征在于,连接后产物转化入感受态细胞DH5ɑ中,在含100μg/mL氨苄青霉素的SOC固培养基涂布筛选培养,长出的单菌落扩大繁殖后提取质粒,即得到302a1-L4440重组质粒。7. the system construction method that obtains in vitro a large amount of white wax worm dsRNA in vitro according to claim 1, it is characterized in that, product is transformed into competent cell DH5ɑ after ligation, in the SOC solid medium coating screening containing 100 μg/mL ampicillin After culture, the single colony that grows is expanded and propagated, and the plasmid is extracted to obtain the 302a1-L4440 recombinant plasmid. 8.根据权利要求1所述的体外大量获得白蜡虫dsRNA的体系构建方法,其特征在于,步骤(2)的具体方法是:将步骤(1)得到的302a1-L4440重组质粒转化进入大肠杆菌感受态细胞HT115(DE3)菌株中,涂布于含100μg/mL氨苄青霉素和50μg/mL四环素的SOC固体培养基上,避光培养12h,挑取单菌落,得到302a1-L4440-HT115菌体。8. The system construction method for obtaining a large amount of dsRNA in vitro according to claim 1, wherein the specific method of step (2) is: transform the 302a1-L4440 recombinant plasmid obtained in step (1) into Escherichia coli to sense In the HT115 (DE3) strain of morphological cells, it was spread on SOC solid medium containing 100 μg/mL ampicillin and 50 μg/mL tetracycline, and cultured in the dark for 12 h, and a single colony was picked to obtain 302a1-L4440-HT115 cells. 9.根据权利要求1所述的体外大量获得白蜡虫dsRNA的体系构建方法,其特征在于,步骤(3)的具体方法是:将302a1-L4440-HT115菌体于含100μg/mL氨苄青霉素和50μg/mL四环素的SOC液体培养基中,37℃避光培养10-12h,然后于含75μg/mL氨苄青霉素和12.5μg/mL四环素的2×YT液体培养基中摇床培养至OD600=0.38~0.42,加入IPTG诱导培养3~4h,获得含有白蜡虫302a1基因片段的dsRNA菌液。9. The system construction method for obtaining a large amount of dsRNA in vitro according to claim 1, characterized in that, the specific method of step (3) is: placing 302a1-L4440-HT115 thalline in a solution containing 100 μg/mL ampicillin and 50 μg /mL tetracycline in SOC liquid medium, cultured at 37°C in the dark for 10-12h, and then shaken in 2×YT liquid medium containing 75μg/mL ampicillin and 12.5μg/mL tetracycline to OD 600 =0.38~ 0.42, add IPTG to induce culture for 3-4 hours, and obtain a dsRNA bacterial liquid containing the 302a1 gene fragment of A. chinensis.
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