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CN112725367B - Sweet potato sucrose invertase gene IbINV and its application - Google Patents

Sweet potato sucrose invertase gene IbINV and its application Download PDF

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CN112725367B
CN112725367B CN202110223954.9A CN202110223954A CN112725367B CN 112725367 B CN112725367 B CN 112725367B CN 202110223954 A CN202110223954 A CN 202110223954A CN 112725367 B CN112725367 B CN 112725367B
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杨冬静
谢逸萍
孙厚俊
张成玲
李宗芸
马居奎
唐伟
陈晶伟
马代夫
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Jiangsu Xuhuai District Xuzhou Agricultural Research Institute (jiangsu Xuzhou Sweet Potato Research Center)
Jiangsu Normal University
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Jiangsu Normal University
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Abstract

本发明公开了甘薯蔗糖转化酶基因IbINV及其应用,该甘薯蔗糖转化酶基因为SEQ ID NO:1所示的DNA分子;该基因编码的蛋白为SEQ ID NO:2所示的氨基酸序列组成的蛋白质;将含有所述编码基因的重组载体为将SEQ ID NO.1所示的DNA分子中去掉终止密码子并融合了GFP基因序列的片段插入到pGWB5的两个attR位点之间得到的重组载体。本发明的IbINV基因和重组载体可调控植物的甘薯黑斑病菌抗性,将编码IbINV蛋白的DNA分子导入目的植物,可得到黑斑病菌抗性显著增强的转基因植物。本发明提供的IbINV基因及其编码蛋白可提高植物对甘薯黑斑病菌抗性,为定向改良植物对甘薯黑斑病菌抗性奠定了基础。

Figure 202110223954

The invention discloses a sweet potato sucrose invertase gene IbINV and an application thereof. The sweet potato sucrose invertase gene is a DNA molecule shown in SEQ ID NO: 1; the protein encoded by the gene is composed of an amino acid sequence shown in SEQ ID NO: 2 protein; the recombinant vector containing the coding gene is the recombination obtained by inserting the fragment of the DNA molecule shown in SEQ ID NO. vector. The IbINV gene and the recombinant vector of the present invention can regulate the resistance of the plant to the black spot fungus, and the DNA molecule encoding the IbINV protein can be introduced into the target plant to obtain a transgenic plant with significantly enhanced black spot fungus resistance. The IbINV gene and the encoded protein thereof provided by the invention can improve the resistance of plants to the fungus of sweet potato black spot, and lay a foundation for the directional improvement of the resistance of plants to the fungus of sweet potato black spot.

Figure 202110223954

Description

甘薯蔗糖转化酶基因IbINV及其应用Sweet potato sucrose invertase gene IbINV and its application

技术领域technical field

本发明属于基因工程技术领域,具体涉及一种甘薯蔗糖转化酶基因IbINV及其应用。The invention belongs to the technical field of genetic engineering, and in particular relates to a sweet potato sucrose invertase gene IbINV and an application thereof.

背景技术Background technique

甘薯黑斑病又名黑疤病,在世界各甘薯产区均有发生,1937年该病害从日本鹿儿岛传入我国辽宁省盖县,并由北向南逐渐蔓延,现有26个省、市、自治区相继报道过该病害的发生和危害。甘薯黑斑病在我国各薯区发生普遍,在华北区域、黄淮海流域、长江流域、南方薯区发生危害较为严重。每年由甘薯黑斑病造成的产量损失约为5%~10%,危害严重时造成的损失可达20%~50%,甚至更高。并且,被黑斑病菌侵染的薯块中可产生甘薯黑疱霉酮等有毒物质,人畜食用后会引发中毒甚至死亡。因此,提高对甘薯黑斑病菌的抗性逐渐成为了科研领域的重点工作。Sweet potato black spot disease, also known as black spot disease, occurs in all sweet potato producing areas in the world. In 1937, the disease was introduced into Gai County, Liaoning Province, my country from Kagoshima, Japan, and gradually spread from north to south. There are currently 26 provinces, Cities and autonomous regions have reported the occurrence and harm of the disease one after another. Sweet potato black spot is common in all potato regions in China, and the damage is more serious in North China, the Huanghuaihai Basin, the Yangtze River Basin, and the southern potato region. The annual yield loss caused by sweet potato black spot disease is about 5% to 10%, and the loss caused by serious damage can reach 20% to 50%, or even higher. In addition, the potato pieces infected by the black spot fungus can produce toxic substances such as sweet potato nigra ketone, which can cause poisoning or even death after human and animal consumption. Therefore, improving the resistance to sweet potato black spot has gradually become a key work in the field of scientific research.

通过传统的育种方法可以在一定程度上提高植物对甘薯黑斑病菌的抗性,但是传统育种存在时间长工作量大的问题。随着分子生物学技术的快速发展,采用转基因等基因工程技术定向改良植物抗逆性已成为现实。因此,挖掘具有抗甘薯黑斑病菌的新基因并通过生物工程的手段予以利用是提高植物对甘薯黑斑病菌抗性的有效途径。Traditional breeding methods can improve the resistance of plants to black spot fungus to a certain extent, but traditional breeding has the problem of long time and heavy workload. With the rapid development of molecular biology technology, it has become a reality to use genetic engineering technology such as transgenic to improve plant stress resistance. Therefore, it is an effective way to improve the resistance of plants to black spot fungus by excavating new genes with resistance to black spot fungus of sweet potato and utilizing them by means of bioengineering.

发明内容SUMMARY OF THE INVENTION

本发明所要解决的技术问题为如何提高植物对甘薯黑斑病菌的抗性。The technical problem to be solved by the present invention is how to improve the resistance of plants to black spot fungus of sweet potato.

为解决上述技术问题,甘薯蔗糖转化酶基因IbINV,其核苷酸如SEQ ID NO:1所示。In order to solve the above-mentioned technical problems, the nucleotides of the sweet potato sucrose invertase gene IbINV are shown in SEQ ID NO: 1.

作为本发明所述的甘薯蔗糖转化酶基因IbINV的优选方案:在严格条件下与SEQID NO:1限定的DNA分子杂交,且氨基酸序列如SEQ ID NO.2所示的蛋白质。As a preferred solution of the sweet potato sucrose invertase gene IbINV of the present invention: hybridize with the DNA molecule defined by SEQ ID NO: 1 under stringent conditions, and the amino acid sequence is the protein shown in SEQ ID NO. 2.

作为本发明所述的甘薯蔗糖转化酶基因IbINV的优选方案:所述蛋白质为:B1)或B2)所示:As the preferred solution of the sweet potato sucrose invertase gene IbINV of the present invention: the protein is shown as: B1) or B2):

所述B1)为SEQ ID NO.2所示的氨基酸序列的N端或/和C端连接蛋白标签得到的融合蛋白;The B1) is a fusion protein obtained by linking the N-terminus or/and the C-terminus of the amino acid sequence shown in SEQ ID NO.2 with a protein tag;

所述B2)为将SEQ ID NO.2所示的氨基酸序列经过一个或几个氨基酸残基的取代和/或缺失和/或添加得到的与氨基酸序列SEQ ID NO.2具有90%以上的序列一致性且功能相同的蛋白质。The B2) is a sequence with more than 90% of the amino acid sequence SEQ ID NO.2 obtained by the substitution and/or deletion and/or addition of one or several amino acid residues to the amino acid sequence shown in SEQ ID NO.2 Consistent and functionally identical proteins.

作为本发明所述的甘薯蔗糖转化酶基因IbINV的优选方案:所述蛋白质的相关生物材料为下述C1)至C12)中的任一种:As the preferred version of the sweet potato sucrose invertase gene IbINV of the present invention: the relevant biological material of the protein is any one of the following C1) to C12):

C1)为所述蛋白质的氨基酸序列SEQ ID NO.2的核酸分子;C1) is the nucleic acid molecule of the amino acid sequence SEQ ID NO.2 of the protein;

C2)含有C1)所述核酸分子的表达盒;C2) an expression cassette containing the nucleic acid molecule of C1);

C3)含有C1)所述核酸分子的重组载体;C3) a recombinant vector containing the nucleic acid molecule described in C1);

C4)含有C2)所述表达盒的重组载体;C4) a recombinant vector containing the expression cassette of C2);

C5)含有C1)所述核酸分子的重组微生物;C5) a recombinant microorganism containing the nucleic acid molecule of C1);

C6)含有C2)所述表达盒的重组微生物;C6) a recombinant microorganism containing the expression cassette of C2);

C7)含有C3)所述重组载体的重组微生物;C7) a recombinant microorganism containing the recombinant vector described in C3);

C8)含有C4)所述重组载体的重组微生物;C8) a recombinant microorganism containing the recombinant vector described in C4);

C9)含有C1)所述核酸分子的转基因植物细胞系;C9) a transgenic plant cell line containing the nucleic acid molecule of C1);

C10)含有C2)所述表达盒的转基因植物细胞系;C10) a transgenic plant cell line containing the expression cassette of C2);

C11)含有C3)所述重组载体的转基因植物细胞系;C11) a transgenic plant cell line containing the recombinant vector described in C3);

C12)含有C4)所述重组载体的转基因植物细胞系。C12) A transgenic plant cell line containing the recombinant vector described in C4).

甘薯蔗糖转化酶基因IbINV在植物抗甘薯黑斑病菌中的应用。The application of sweet potato sucrose invertase gene IbINV in plant resistance to sweet potato black spot.

本发明有益技术效果,本发明提供的IbINV基因及其编码蛋白可提高植物对甘薯黑斑病菌抗性,为定向改良植物对甘薯黑斑病菌抗性奠定了基础。通过将SEQ ID NO.1所示的DNA分子中去掉终止密码子并融合了GFP基因序列的片段插入到pGWB5的两个attR位点之间得到的重组载体。本发明的IbINV基因和重组载体可调控植物的甘薯黑斑病菌抗性,将该基因导入甘薯植株中,得到了过表达IbINV的转基因甘薯植株,将转基因植株进行甘薯黑斑病菌接种处理,与非转基因对照植株(命名为NT株系)相比,转基因株系(命名为OEV株系)对甘薯黑斑病菌的抗性显著增强,具体表现在病情指数比对照显著降低,表明IbINV蛋白及其编码基因在对黑斑病菌的抗性调控过程中起着重要的作用。本发明提供的IbINV蛋白及其编码基因在提高植物对甘薯黑斑病菌的抗性方面具有重要的理论意义与应用价值。本发明将在农业领域具有广阔的应用空间和市场前景。The present invention has beneficial technical effects. The IbINV gene and its encoded protein provided by the present invention can improve the resistance of plants to S. japonica, and lay a foundation for directional improvement of the resistance of plants to S. spp. A recombinant vector obtained by inserting a fragment of the DNA molecule shown in SEQ ID NO. 1 with the stop codon removed and fused with the GFP gene sequence between the two attR sites of pGWB5. The IbINV gene and the recombinant vector of the present invention can regulate the resistance of the plant to S. spp., the gene is introduced into the sweet potato plant to obtain a transgenic sweet potato plant that overexpresses IbINV, and the transgenic plant is inoculated with S. spp. Compared with the transgenic control plants (named NT lines), the resistance of the transgenic lines (named OEV lines) to S. spp. was significantly enhanced, specifically in that the disease index was significantly lower than that of the control, indicating that the IbINV protein and its encoding Genes play an important role in the regulation of resistance to black spot fungus. The IbINV protein and its encoding gene provided by the present invention have important theoretical significance and application value in improving the resistance of plants to S. spp. The invention will have broad application space and market prospect in the agricultural field.

附图说明Description of drawings

图1为IbINV基因片段电泳检测(A)和INV蛋白质系统进化树构建(B)Figure 1 shows IbINV gene fragment electrophoresis detection (A) and INV protein phylogenetic tree construction (B)

图2为pGWB5:IbINV植物过表达载体图Figure 2 is a map of pGWB5:IbINV plant overexpression vector

图3为IbINV转基因甘薯植株的PCR检测电泳图Fig. 3 is the electrophoresis picture of PCR detection of IbINV transgenic sweet potato plants

图4为荧光定量PCR筛选IbINV转基因甘薯株系Figure 4 shows the screening of IbINV transgenic sweet potato lines by real-time PCR

图5为IbINV转基因甘薯植株抗黑斑病表型Figure 5 shows the black spot resistance phenotype of IbINV transgenic sweet potato plants

具体实施方式Detailed ways

下面结合附图和具体实施例对本发明作进一步详细描述。The present invention will be further described in detail below with reference to the accompanying drawings and specific embodiments.

下述实施例中所用的实验方法如无特殊说明,均为常规方法。The experimental methods used in the following examples are conventional methods unless otherwise specified.

下述实施例中所用的材料、试剂等,如无特殊说明,均可从商业途径获得。Materials, reagents, etc. used in the following examples can be obtained from commercial sources unless otherwise specified.

实施例1甘薯蔗糖转化酶IbINV基因的获得Example 1 Acquisition of sweet potato sucrose invertase IbINV gene

一、甘薯总RNA提取1. Extraction of total RNA from sweet potato

采用植物总RNA提取试剂盒(北京天根公司)提取移栽周期为5w左右的徐薯29植株第四片完全展开叶的总RNA,用Nanodrop检测RNA浓度及质量,电泳检测RNA完整性。具体操作参照天根植物总RNA提取试剂盒使用说明书进行。The total RNA of the fourth fully expanded leaf of Xushu 29 plants with a transplanting period of about 5w was extracted using a plant total RNA extraction kit (Beijing Tiangen Company), the RNA concentration and quality were detected by Nanodrop, and the RNA integrity was detected by electrophoresis. For specific operations, refer to the instruction manual of the total RNA extraction kit from Tiangen plants.

二、第一链cDNA合成2. First-strand cDNA synthesis

采用Takara公司的DNaseI和AMV反转录酶,以提取的徐薯29总RNA为模板,进行基因组DNA的去除和反转录。基因组DNA的去除参照表1中的体系配比进行,混匀后37℃水浴30min后加入1μL EDTA,65℃10min以终止反应,然后迅速置冰上冷却。Genomic DNA was removed and reverse transcribed using DNaseI and AMV reverse transcriptase from Takara, and the total RNA extracted from Xushu 29 was used as a template. The removal of genomic DNA was carried out with reference to the system ratio in Table 1. After mixing, 1 μL of EDTA was added in a water bath at 37 °C for 30 min, and the reaction was terminated at 65 °C for 10 min, and then quickly cooled on ice.

表1.基因组DNA的去除体系配比表Table 1. Removal system ratio table of genomic DNA

Figure BDA0002956111790000031
Figure BDA0002956111790000031

反转录反应,按照表2中的反转录体系配制混合液,混合均匀后置于PCR仪中进行反转录,反应条件为:50℃反应1h,95℃反应5min,反转录获得cDNA置于-20℃保存。For the reverse transcription reaction, prepare the mixed solution according to the reverse transcription system in Table 2. After mixing evenly, place it in a PCR machine for reverse transcription. The reaction conditions are: 50 °C for 1 h, 95 °C for 5 min, and reverse transcription to obtain cDNA Store at -20°C.

表2.反转录体系配制表Table 2. Reverse transcription system configuration table

Figure BDA0002956111790000032
Figure BDA0002956111790000032

Figure BDA0002956111790000041
Figure BDA0002956111790000041

三、IbINV蛋白的cDNA编码序列克隆3. Cloning of cDNA coding sequence of IbINV protein

以徐薯29的cDNA为模板,设计正向和反向引物IbINV_F和IbINV_R(序列分别为SEQID NO:3和SEQ ID NO:4),采用上述正反向引物进行PCR扩增。扩增反应体系总体积为50μL,其中KOD buffer 25μL,dNTP 10μL,ddH2O 10μL,KOD酶1μL,正反引物各1.5μL,基因组DNA模板1μL。采用PCR扩增条件为94℃预变性2min,98℃变性10s,55℃退火30s,68℃延伸60s,循环35次,再在68℃下延伸6min后终止反应。PCR产物用0.8%琼脂糖凝胶100V电泳检测,获得大小约为1983bp长度的扩增片段;Using the cDNA of Xushu 29 as a template, forward and reverse primers IbINV_F and IbINV_R (sequences are SEQ ID NO: 3 and SEQ ID NO: 4, respectively) were designed, and the above-mentioned forward and reverse primers were used for PCR amplification. The total volume of the amplification reaction system was 50 μL, including 25 μL of KOD buffer, 10 μL of dNTP, 10 μL of ddH 2 O, 1 μL of KOD enzyme, 1.5 μL of forward and reverse primers, and 1 μL of genomic DNA template. The PCR amplification conditions were pre-denaturation at 94 °C for 2 min, denaturation at 98 °C for 10 s, annealing at 55 °C for 30 s, extension at 68 °C for 60 s, cycle 35 times, and extension at 68 °C for 6 min to terminate the reaction. PCR products were detected by 0.8% agarose gel electrophoresis at 100V, and an amplified fragment with a size of about 1983 bp was obtained;

上述中的SEQ ID NO:3为:ATGGCCGCCACCACTTCTTCCG;SEQ ID NO: 3 in the above is: ATGGCCGCCACCACTTCTTCCG;

SEQ ID NO:4为:TTACAATTGATTGATGAAAGAG。SEQ ID NO: 4 is: TTACAATTGATTGATGAAAGAG.

PCR扩增条件如下:PCR amplification conditions are as follows:

Figure BDA0002956111790000042
Figure BDA0002956111790000042

四、IbINV基因片段回收纯化4. Recovery and purification of IbINV gene fragments

琼脂糖凝胶电泳片段回收参照说明书,按照以下步骤进行:Refer to the instruction manual for the recovery of fragments from agarose gel electrophoresis, and follow the steps below:

第一步,在凝胶成像系统紫外灯下,采用干净刀片切取获得的大小约为1983bp长度的扩增条带,尽量切除不带DNA的凝胶,得到凝胶体积越小越好;The first step, under the UV lamp of the gel imaging system, use a clean blade to cut the amplified band with a length of about 1983bp, and try to cut off the gel without DNA, and the smaller the gel volume, the better;

第二步,将切下含有DNA条带凝胶放入1.5ml离心管,称重;The second step is to put the excised gel containing DNA bands into a 1.5ml centrifuge tube and weigh;

第三步,加入2倍体积溶胶/结合液DB;The third step, adding 2 times the volume of sol/binding solution DB;

第四步,56℃水浴放置5min左右至胶完全溶解,每1-2min涡旋震荡一次帮助加速溶解;The fourth step, put it in a 56 ℃ water bath for about 5 minutes until the glue is completely dissolved, and vortex every 1-2 minutes to help accelerate the dissolution;

第五步,将吸附柱放入收集管中,将上述溶液加入微量吸附柱中,12000rpm离心30-60s,弃掉废液;The fifth step, put the adsorption column into the collection tube, add the above solution to the micro-adsorption column, centrifuge at 12000rpm for 30-60s, and discard the waste liquid;

第六步,加入900μL漂洗液WB(已加入无水乙醇),12000rpm离心1min,弃掉废液;The sixth step, add 900 μL of rinsing solution WB (absolute ethanol has been added), centrifuge at 12000 rpm for 1 min, and discard the waste liquid;

第七步,12000rpm再次离心2min,尽量除去漂洗液;The seventh step, centrifuge again at 12000rpm for 2min, try to remove the rinse solution;

第八步,取出微量吸附柱,放入新的离心管中,在吸附膜的中间部位加入35μL洗脱缓冲液,室温放置2min后12000rpm离心1min即可。The eighth step, take out the micro-adsorption column, put it into a new centrifuge tube, add 35 μL of elution buffer to the middle part of the adsorption membrane, put it at room temperature for 2 minutes, and then centrifuge at 12,000 rpm for 1 minute.

五、T-IbINV载体的构建5. Construction of T-IbINV vector

纯化后连接T载体,连接体系为6μl体系包括:All in one buffer 6μl,T4连接酶1μl,纯化产物4μl,混匀后顺离至底部后置于25℃温育10min,然后进行大肠杆菌转化。After purification, connect the T vector. The ligation system is 6 μl. The system includes: All in one buffer 6 μl, T4 ligase 1 μl, and purified product 4 μl.

具体步骤如下:Specific steps are as follows:

第一步,将6μl连接产物加入50μl大肠杆菌DH5α感受态细胞管中混匀后静置30min;In the first step, add 6 μl of the ligation product to a 50 μl E. coli DH5α competent cell tube, mix well, and let stand for 30 minutes;

第二步,将上述混合物转移到42℃水浴锅中,热击30s后迅速冷却2min;In the second step, the above mixture was transferred to a 42°C water bath, and rapidly cooled for 2min after thermal shock for 30s;

第三步,加入900μl LB液体培养基,37℃,200rpm摇培1h;The third step, add 900μl LB liquid medium, shake at 37°C, 200rpm for 1h;

第四步,取出10000rpm离心30s,弃上清,留150-200μl LB培养基;The fourth step, take out 10000rpm centrifugation for 30s, discard the supernatant, and leave 150-200μl LB medium;

第五步,混匀后将转化细胞转移到含有100μg/ml羧苄青霉素的LB平板中,均匀涂布后置于37℃培养箱中培养12-16h;Step 5: After mixing, transfer the transformed cells to LB plates containing 100 μg/ml carbenicillin, spread evenly, and place them in a 37°C incubator for 12-16 hours;

第六步,在抗性平板中挑取单克隆,加入到500μl浓度为100μg/ml羧苄青霉素的LB液体培养基中,37℃,200rpm摇培3h左右;The sixth step, pick a single clone from the resistant plate, add it to 500 μl of LB liquid medium with a concentration of 100 μg/ml carbenicillin, and shake at 37 ° C and 200 rpm for about 3 hours;

第七步,取摇培菌液进行PCR鉴定,PCR 20μl体系包括:premix 10μl,正反引物各1.0μL,菌液2μl并用6μl DDH2O补足20μl,然后进行PCR反应,反应完成后,用0.8%琼脂糖凝胶100V电泳检测条带大小。The seventh step is to take the shake culture solution for PCR identification. The PCR 20μl system includes: 10μl of premix, 1.0μl of forward and reverse primers, 2μl of bacteria solution and supplemented with 6μl of DDH 2 O to 20μl, and then carry out the PCR reaction. After the reaction is completed, use 0.8 Band size was detected by 100V agarose gel electrophoresis.

PCR扩增条件如下:PCR amplification conditions are as follows:

Figure BDA0002956111790000051
Figure BDA0002956111790000051

六、T-IbINV质粒提取及测序6. T-IbINV plasmid extraction and sequencing

取条带大小正确的单克隆,加入到5-7ml浓度为100μg/ml羧苄青霉素的LB液体培养基中,37℃,200rpm过夜震荡培养后,采用天根质粒小提试剂盒进行质粒提取,具体操作参照说明书进行。将提取的质粒送上海生工测序验证序列,采用Bioedit等生物信息学软件进行序列比对分析(图1)。Take a single clone with the correct band size, add it to 5-7ml of LB liquid medium with a concentration of 100μg/ml carbenicillin, 37°C, 200rpm overnight shaking culture, use Tiangen plasmid mini-extraction kit for plasmid extraction, Refer to the manual for specific operations. The extracted plasmids were sent to Shanghai Sangon for sequencing to verify the sequence, and bioinformatics software such as Bioedit was used for sequence comparison analysis (Figure 1).

实施例2 IbINV蛋白在调控植物抗甘薯黑斑病菌中的应用Example 2 The application of IbINV protein in regulating plant resistance to sweet potato black spot

一、pGWB5-IbINV过表达载体的构建1. Construction of pGWB5-IbINV overexpression vector

以T-IbINV质粒为模板,将质粒和水体积比为1:49稀释后作为PCR扩增模板,引物为特异性的attb-IbINV正反引物,引物序列分别为SEQ ID NO:5为:AAAAAGCAGGCTGCATGGCCGCCACCACTTCT;SEQ ID NO:6为:AGAAAGCTGGGTCCAATTGATTGATGAAAGAG;按照以下反应体系进行配制:The T-IbINV plasmid was used as a template, and the volume ratio of the plasmid and water was 1:49 as a PCR amplification template. The primers were specific attb-IbINV forward and reverse primers, and the primer sequences were SEQ ID NO: 5: AAAAAGCAGGCTGCATGGCCCGCCACCACTTCT ; SEQ ID NO: 6 is: AGAAAGCTGGGTCCAATTGATTGATGAAAGAG; Prepare according to the following reaction system:

表3.attb-IbINV PCR反应体系配制表Table 3. attb-IbINV PCR reaction system preparation table

Figure BDA0002956111790000061
Figure BDA0002956111790000061

将配置的体系轻弹混匀后顺离,PCR扩增条件为:94℃预变性2min,98℃变性10s,60℃退火60s,68℃延伸30s,循环20次,再在68℃下延伸6min后终止反应。The configured system was flicked and mixed, and then dissociated. PCR amplification conditions were: pre-denaturation at 94 °C for 2 min, denaturation at 98 °C for 10 s, annealing at 60 °C for 60 s, extension at 68 °C for 30 s, cycle 20 times, and then extend at 68 °C for 6 min Then the reaction was terminated.

以PCR1产物为模板,以attb-adaptor为引物,正反引物序列SEQ ID NO:7为:GGGGACAAGTTTGTACAAAAAAGCAGGCT;SEQ ID NO:8为:GGGGACCACTTTGTACAAGAAAGCTGGGT。Using the PCR1 product as a template and attb-adaptor as a primer, the forward and reverse primer sequences of SEQ ID NO: 7 are: GGGGACAAGTTTGTACAAAAAAGCAGGCT; SEQ ID NO: 8 is: GGGGACCACTTTGTACAAGAAAGCTGGGT.

体系配置同上,PCR扩增条件如下:The system configuration is the same as above, and the PCR amplification conditions are as follows:

Figure BDA0002956111790000062
Figure BDA0002956111790000062

PCR结束后电泳检测,有目的条带且很亮,切胶回收纯化后进行BP反应,BP反应10μL体系如表4所示。混匀离心后置于25℃,3h,加入1μL Proteinase K Solution,混匀后置于37℃,10min孵育,终止反应。After the PCR, the electrophoresis detected the target band and it was very bright. The BP reaction was carried out after the gel was recovered and purified. The BP reaction system of 10 μL is shown in Table 4. Mix well and centrifuge at 25°C for 3h, add 1 μL of Proteinase K Solution, mix well and incubate at 37°C for 10min to terminate the reaction.

将连接产物转化大肠杆菌DH5α后将转化细胞转移到含有庆大霉素的LB抗性平板中。将鉴定后的单克隆在含有庆大霉素的LB液体培养基中震荡培养过夜,提取质粒pDONOR207-IbINV,部分用于测序验证,剩余质粒进行下一步LR反应,LR反应10μL体系如表5所示:After the ligation product was transformed into E. coli DH5α, the transformed cells were transferred to LB-resistant plates containing gentamicin. The identified single clones were shaken and cultured in LB liquid medium containing gentamicin overnight, and the plasmid pDONOR207-IbINV was extracted, and part of it was used for sequencing verification. The remaining plasmids were subjected to the next LR reaction. Show:

表4.BP反应体系配制表Table 4. BP reaction system preparation table

Figure BDA0002956111790000071
Figure BDA0002956111790000071

表5.LR反应体系配制表Table 5. LR reaction system preparation table

Figure BDA0002956111790000072
Figure BDA0002956111790000072

混匀离心后置于25℃,5h,加入1μL Proteinase K Solution,混匀后置于37℃,10min孵育,终止反应。转化步骤和PCR菌液鉴定方法同上,转化细胞转移到含有卡那霉素的LB抗性平板中。将PCR鉴定后的单克隆在含有卡那霉素的LB液体培养基中摇培过夜,提取质粒pGWB5-IbINV(图2)。Mix well and centrifuge at 25°C for 5h, add 1 μL of Proteinase K Solution, mix well and incubate at 37°C for 10min to terminate the reaction. The transformation steps and PCR identification methods were the same as above, and the transformed cells were transferred to LB resistant plates containing kanamycin. The single clone identified by PCR was shaken overnight in LB liquid medium containing kanamycin, and the plasmid pGWB5-IbINV was extracted (Fig. 2).

二、pGWB5-IbINV过表达载体导入根癌农杆菌2. Introduction of pGWB5-IbINV overexpression vector into Agrobacterium tumefaciens

IbINV重组质粒导入根癌农杆菌,包括根癌农杆菌感受态细胞的制备、液氮冻融法转化根癌农杆菌两部分,其中根癌农杆菌感受态细胞的制备步骤如下:The IbINV recombinant plasmid is imported into Agrobacterium tumefaciens, including the preparation of Agrobacterium tumefaciens competent cells and the transformation of Agrobacterium tumefaciens by liquid nitrogen freeze-thaw method, wherein the preparation steps of Agrobacterium tumefaciens competent cells are as follows:

第一步,挑取根癌农杆菌EHA105的单菌落于5mL含40μg/mL利福霉素(Rif)的YEP液体培养基中,28℃,230rpm培养至OD600≈0.6;The first step is to pick a single colony of Agrobacterium tumefaciens EHA105 in 5 mL of YEP liquid medium containing 40 μg/mL rifamycin (Rif) at 28 °C and 230 rpm to OD 600 ≈0.6;

第二步,收集1.5mL菌液,4℃,8000rpm离心1min,弃尽上清;In the second step, 1.5 mL of bacterial liquid was collected, centrifuged at 4°C, 8000 rpm for 1 min, and the supernatant was discarded;

第三步,菌体用200μL ddH2O充分重悬,4℃,8000rpm离心1min,弃尽上清;In the third step, the cells were fully resuspended with 200 μL ddH 2 O, centrifuged at 4°C, 8000 rpm for 1 min, and the supernatant was discarded;

第四步,重复步骤第三步三次,弃尽上清;The fourth step, repeat the third step three times, discard the supernatant;

第五步,菌体再用200μL ddH2O充分重悬,即为根癌农杆菌感受态细胞。In the fifth step, the cells were fully resuspended with 200 μL of ddH 2 O, which was the competent cells of Agrobacterium tumefaciens.

液氮冻融法转化根癌农杆菌,具体操作步骤如下:The liquid nitrogen freeze-thaw method is used to transform Agrobacterium tumefaciens, and the specific operation steps are as follows:

第一步,冰浴融化农杆菌EHA105感受态细胞100μL;The first step is to thaw 100 μL of Agrobacterium EHA105 competent cells in an ice bath;

第二步,取20μL重组质粒加入到根癌农杆菌感受态细胞中,轻轻混匀,置于冰上10min;In the second step, 20 μL of the recombinant plasmid was added to Agrobacterium tumefaciens competent cells, mixed gently, and placed on ice for 10 min;

第三步,将冰浴后的混合物立即置于液氮中速冻1min;In the third step, the mixture after the ice bath was immediately placed in liquid nitrogen for quick freezing for 1 min;

第四步,37℃水浴5min后,加入900mL YEP液体培养基,28℃,200rpm震荡培养2h;The fourth step, after 37 ℃ water bath for 5 minutes, add 900mL YEP liquid medium, 28 ℃, 200rpm shaking culture for 2h;

第五步,8000rpm离心2min,留底部100μL菌液,悬浮沉淀后均匀涂布于含100μg/mL卡那霉素(Km)或者壮观霉素(Spec)和40μg/mL利福平的YEP固体培养基上,在28℃培养箱中倒置培养2d;Step 5: Centrifuge at 8000 rpm for 2 min, leave 100 μL of bacterial liquid at the bottom, suspend and precipitate and spread evenly on YEP solid culture containing 100 μg/mL kanamycin (Km) or spectinomycin (Spec) and 40 μg/mL rifampicin On the base, incubate at 28°C upside down for 2 days;

第六步,菌液PCR检测阳性克隆。The sixth step, bacterial liquid PCR detection of positive clones.

三、IbINV转基因甘薯植株的获得3. Acquisition of IbINV Transgenic Sweet Potato Plants

第一步,侵染和共培养First step, infection and co-cultivation

采用农杆菌介导的胚性愈伤遗传转化方法将IbINV的cDNA编码序列导入到徐薯29胚性愈伤中,具体方法如下:将继代3d的胚性悬浮细胞系悬浮于制备好的OD600=1.0的根癌农杆菌菌液中,侵染10min,期间多次轻轻摇动三角瓶,以使菌液和愈伤充分接触。然后将菌液倒出,并用无菌滤纸将多余菌液吸出。将侵染过的胚性悬浮细胞转移至含有2.0mg/l 2,4-D,20mg/l AS的MS固体培养基上进行共培养,固体培养基上铺一层无菌滤纸,以抑制农杆菌生长,28℃,暗培养3d。同时以未转化的愈伤作为对照。The cDNA coding sequence of IbINV was introduced into the embryogenic callus of Xushu 29 by the method of genetic transformation of embryogenic callus mediated by Agrobacterium. 600 = 1.0 Agrobacterium tumefaciens liquid, infect for 10 minutes, during which the triangular flask is gently shaken several times to make the bacterial liquid and callus fully contact. Then the bacterial liquid was poured out, and the excess bacterial liquid was sucked out with sterile filter paper. The infected embryogenic suspension cells were transferred to MS solid medium containing 2.0mg/l 2,4-D, 20mg/l AS for co-cultivation, and a layer of sterile filter paper was placed on the solid medium to inhibit the growth of Bacillus growth, 28 ℃, dark culture for 3d. At the same time, untransformed callus was used as a control.

第二步,转化体的抑菌和选择培养The second step, bacteriostatic and selective culture of transformants

将共培养3d的胚性愈伤细胞用无菌水清洗5~6次,再用含600mg/l头孢菌素的MS液体培养基,抑菌处理1h,期间置于水平摇床上,100rpm震荡处理,以更有效的除去残留的根癌农杆菌。然后用含200mg/l头孢菌素和含100mg/l潮霉素的培养基进行暗培养。The embryogenic callus cells co-cultured for 3 days were washed with sterile water for 5 to 6 times, and then treated with MS liquid medium containing 600 mg/l cephalosporin for bacteriostatic treatment for 1 h. During the period, placed on a horizontal shaking table and shaken at 100 rpm. , to more effectively remove residual Agrobacterium tumefaciens. Dark incubation was then carried out with medium containing 200 mg/l cephalosporin and 100 mg/l hygromycin.

第三步,体细胞胚的诱导The third step, induction of somatic embryos

将筛选出的抗性愈伤组织转移到体细胞胚诱导培养基上,光照培养诱导体细胞胚发生,培养条件为28℃。The screened resistant calli were transferred to somatic embryo induction medium, and somatic embryogenesis was induced by light culture at 28°C.

第四步,拟转基因植株再生The fourth step, the regeneration of the pseudo-transgenic plants

用含200mg/l头孢菌素和含100mg/l潮霉素的MS培养基进行光照培养,使其再生成完整植株。Whole plants were regenerated by light cultivation with MS medium containing 200 mg/l cephalosporin and 100 mg/l hygromycin.

第五步,PCR鉴定The fifth step, PCR identification

提取上述再生甘薯株系的基因组DNA,通过PCR技术检测IbINV基因是否整合到野生型甘薯植株中,具体步骤如下:Extract the genomic DNA of the above-mentioned regeneration sweet potato strain, detect whether the IbINV gene is integrated into the wild-type sweet potato plant by PCR technology, and the concrete steps are as follows:

①提取甘薯植株基因组DNA,具体步骤如下:①Extracting the genomic DNA of sweet potato plants, the specific steps are as follows:

(1)CTAB抽提液置于65℃水浴中预热;(1) The CTAB extract was preheated in a 65°C water bath;

(2)称取除去主脉的新鲜叶片1.0g,置于预冷的研钵中,倒入液氮,尽快将叶片研碎;(2) Weigh 1.0 g of fresh leaves with the main vein removed, place them in a pre-cooled mortar, pour in liquid nitrogen, and grind the leaves as soon as possible;

(3)取1g粉末直接加入预热的CTAB提取液8mL,再加入160μLβ-巯基乙醇(终浓度为2%),CTAB抽提液稍溶化后,用研棒将CTAB抽提液与磨碎的样品混合均匀后转入50mL离心管中;(3) Add 1 g of powder directly to 8 mL of preheated CTAB extract, and then add 160 μL of β-mercaptoethanol (final concentration of 2%). After the CTAB extract is slightly dissolved, the CTAB extract is mixed with the ground The samples were mixed evenly and transferred to a 50mL centrifuge tube;

(4)样品于65℃水浴保温60min,每10-20min摇动一次离心管,注意不要将离心管盖子盖紧以防样品喷出;(4) Keep the sample in a water bath at 65°C for 60min, shake the centrifuge tube every 10-20min, be careful not to close the cap of the centrifuge tube tightly to prevent the sample from being ejected;

(5)加等体积的24:1氯仿/异戊醇,轻轻颠倒混匀;(5) Add an equal volume of 24:1 chloroform/isoamyl alcohol, gently invert and mix;

(6)待平衡后,室温下10000rpm离心5min;(6) After equilibration, centrifuge at 10000rpm for 5min at room temperature;

(7)取上层水相小心转入新管,加入2倍体积预冷的无水乙醇颠倒混匀后,室温下10000rpm离心5min弃上清;(7) Take the upper aqueous phase and carefully transfer it into a new tube, add 2 times the volume of pre-cooled absolute ethanol, invert and mix, and centrifuge at 10,000 rpm for 5 min at room temperature to discard the supernatant;

(8)加入2mL 75%乙醇洗涤2次后置于室温下干燥;(8) add 2mL of 75% ethanol to wash 2 times and then place it to dry at room temperature;

(9)加入ddH2O并于37℃助溶;(9) adding ddH 2 O and helping to dissolve at 37°C;

(10)加入2μL(10μg/μL)Rnase,37℃消化30min,除去DNA样品中的RNA;(10) Add 2 μL (10 μg/μL) Rnase, digest at 37°C for 30 min, and remove RNA in the DNA sample;

(11)分装后置于-20℃保存备用。(11) Store at -20°C after dispensing.

②设计用于PCR鉴定的引物8和引物9(引物8为SEQ ID NO:3,引物9为SEQ ID NO:9)、引物10和引物11(引物10为SEQ ID NO:10,引物11为SEQ ID NO:9);Design primer 8 and primer 9 for PCR identification (primer 8 is SEQ ID NO: 3, primer 9 is SEQ ID NO: 9), primer 10 and primer 11 (primer 10 is SEQ ID NO: 10, and primer 11 is SEQ ID NO: 9) SEQ ID NO: 9);

上述中SEQ ID NO:9为:TTGCTTTGAAGACGTGGTTG;SEQ ID NO:10为:GATTCAAGGCTTGCTTCACA。In the above, SEQ ID NO: 9 is: TTGCTTTGAAGACGTGGTTG; SEQ ID NO: 10 is: GATTCAAGGCTTGCTTCACA.

③以上述提取的基因组DNA为模板,进行PCR检测,PCR扩增体系如表6所示,3. Take the genomic DNA extracted above as a template, carry out PCR detection, and the PCR amplification system is as shown in Table 6,

表6.转基因植株鉴定PCR反应体系配制表Table 6. Preparation of PCR reaction system for identification of transgenic plants

Figure BDA0002956111790000101
Figure BDA0002956111790000101

PCR扩增程序为:The PCR amplification procedure is:

Figure BDA0002956111790000102
Figure BDA0002956111790000102

扩增产物采用0.8%琼脂糖凝胶电泳进行检测,从图3可以看出,两个目标片段均能扩增到的为IbINV转基因阳性甘薯植株,表明IbINV基因已经整合到甘薯基因组中,将这些转基因株系命名为OEV株系。The amplified products were detected by 0.8% agarose gel electrophoresis. It can be seen from Figure 3 that both target fragments can be amplified into IbINV transgenic positive sweet potato plants, indicating that the IbINV gene has been integrated into the sweet potato genome. The transgenic line was named OEV line.

四、荧光定量PCR筛选IbINV转基因甘薯株系4. Fluorescence quantitative PCR screening of IbINV transgenic sweet potato lines

使用植物总RNA提取试剂盒(北京天根公司)提取IbINV转基因株系总RNA,并完成第一链cDNA合成,取反转录后的cDNA 10μL加40μL DW稀释成模板,荧光定量PCR反应20μL体系如表7所示,RT-INV-Primer-F和RT-INV-Primer-R的引物序列分别为SEQ ID NO.11和SEQID NO.12;其中,SEQ ID NO:11为:GGGGCCGTTCGGACTTCT;SEQ ID NO:12为:ACCGTGCTTCCATAAACCTCTT。将配置好的20μL体系震荡混匀离心后进行反应,反应条件为:95℃预变性15min,95℃变性20s,58℃退火40s,72℃延伸20s,循环45次,再在95℃下反应5s,65℃溶解5s。反应结束后观察溶解曲线,记录Ct值,定量计算方法采用2-ΔΔt进行。Use the plant total RNA extraction kit (Beijing Tiangen Company) to extract the total RNA of the IbINV transgenic line, and complete the first-strand cDNA synthesis. Take 10 μL of reverse transcribed cDNA and add 40 μL of DW to dilute it into a template, and the fluorescence quantitative PCR reaction system is 20 μL. As shown in Table 7, the primer sequences of RT-INV-Primer-F and RT-INV-Primer-R are SEQ ID NO. 11 and SEQ ID NO. 12 respectively; wherein, SEQ ID NO: 11 is: GGGGCCGTTCGGACTTCT; SEQ ID NO: 12 is: ACCGTGCTTCCATAAAACCTCTT. The prepared 20 μL system was shaken, mixed and centrifuged, and the reaction was carried out. The reaction conditions were: pre-denaturation at 95 °C for 15 min, denaturation at 95 °C for 20 s, annealing at 58 °C for 40 s, extension at 72 °C for 20 s, cycle 45 times, and then react at 95 °C for 5 s , dissolved at 65°C for 5s. After the reaction, the dissolution curve was observed and the Ct value was recorded. The quantitative calculation method was carried out using 2 -ΔΔt .

表7.定量PCR反应体系配制表Table 7. Quantitative PCR reaction system configuration table

Figure BDA0002956111790000103
Figure BDA0002956111790000103

结果如图4所示,OEV株系普遍表现出IbINV基因上调表达,其中OEV7的IbINV平均上调表达量为NT的7.5倍左右,OEV8中IbINV基因上调表达表达量约为NT的14.4倍,因此后续试验中选取OEV7和OEV8作进一步研究;The results are shown in Figure 4. OEV lines generally showed up-regulated expression of IbINV gene. The average up-regulated expression of IbINV in OEV7 was about 7.5 times that of NT, and the up-regulated expression of IbINV gene in OEV8 was about 14.4 times that of NT. In the experiment, OEV7 and OEV8 were selected for further study;

五、IbINV转基因植株对甘薯黑斑病菌的抗性鉴定V. Identification of the resistance of IbINV transgenic plants to S. spp.

甘薯黑斑病抗性鉴定表型分析参照以下步骤:The phenotype analysis of sweet potato black spot resistance identification refers to the following steps:

第一步,采集甘薯黑斑病样,分离纯化得到甘薯黑斑病菌,并经科赫式法则验证后,PDA平板中培养7天,备用;The first step, collecting sweet potato black spot samples, separating and purifying to obtain sweet potato black spot bacteria, and after being verified by Koch's formula, cultured in PDA plate for 7 days, for use;

第二步,称取马铃薯20g加入1L超纯水煮沸至马铃薯完全烂软后过滤,加15g蔗糖并定容至1L,然后于121℃高压灭菌15min备用;The second step is to weigh 20g of potatoes, add 1L of ultrapure water, boil until the potatoes are completely rotten and soft, filter, add 15g of sucrose and dilute to 1L, then autoclave at 121°C for 15min for later use;

第三步,取出活化好的甘薯黑斑病菌,用直径为6mm的打孔器打取菌碟,每个三角瓶中接种20个菌碟,将接种好的三角瓶置于28℃恒温摇床中,于120rpm/min摇培48h;The third step, take out the activated sweet potato black spot bacteria, use a hole punch with a diameter of 6mm to punch out the bacterial plates, inoculate 20 bacterial plates in each triangular flask, and place the inoculated triangular flask on a constant temperature shaker at 28°C medium, shake at 120rpm/min for 48h;

第四步,过滤收集滤液,将孢子悬浮液浓度调节至约为1×105CFU/ml;The fourth step, the filtrate is collected by filtration, and the concentration of the spore suspension is adjusted to about 1×10 5 CFU/ml;

第五步,剪取生长一致的OEV7和OEV8各3株,分别种植在装灭菌土的花盆中,将制备好的孢子悬浮液进行灌根处理,每个盆钵灌根量为50ml,之后定期喷雾保湿;The 5th step, cut each 3 strains of OEV7 and OEV8 with consistent growth, and plant them in flowerpots filled with sterilized soil respectively, and the prepared spore suspension is treated for root irrigation, and the amount of root irrigation in each pot is 50ml, Moisturize regularly afterwards;

第六步,接种15d后,观察和记录发病情况。并根据发病程度将病情指数分为6个等级。The sixth step, 15d after inoculation, observe and record the incidence. The disease index was divided into 6 grades according to the severity of the disease.

薯苗黑斑病病情指数分级标准如下:0级:整株健康无病症;1级:植株正常生根,地下部茎有零星黑斑,茎基部叶片发黄或有萎蔫,地上部正常分枝生长;3级:植株生根但根系较少,地下部茎有连片黑斑,茎基部叶片发黄,薯苗生长缓慢;5级:植株几乎不生根,茎基部叶片发黄,薯苗完全不分枝;7级:地下部坏死腐烂,整株叶片发黄,植株萎蔫;9级:地下部坏死腐烂,薯苗心叶腐烂,整株死亡。按照以下公式计算平均病情指数,平均病情指数=(重复1病情指数+重复2病情指数+重复3病情指数)/3。The grading standard of black spot disease index of potato seedlings is as follows: grade 0: the whole plant is healthy and disease-free; grade 1: the plant takes root normally, the stem has sporadic black spots on the ground, the leaves at the base of the stem are yellow or wilted, and the shoots grow normally. ;Grade 3: The plant takes root but there are few roots, the underground stem has continuous black spots, the leaves at the base of the stem are yellow, and the potato seedlings grow slowly; Grade 5: The plant hardly takes root, the leaves at the base of the stem are yellow, and the potato seedlings are completely indistinguishable. Branch; Grade 7: Underground necrosis and rot, leaves of the whole plant turn yellow, and the plant wilts; Grade 9: Underground necrosis and rot, potato seedling heart leaves rot, and the whole plant dies. The average disease index was calculated according to the following formula, average disease index=(repetition 1 disease index + repeat 2 disease index + repeat 3 disease index)/3.

结果如图5所示,可以看出IbINV转基因植株OEV株系比野生型甘薯植株NT对黑斑病的抗性显著提高,进一步测定了各株系被甘薯黑斑病菌侵染后病情指数,结果如表8所示,黑斑病菌侵染15d后OEV7和OEV8的平均病情指数分别为0.67和1.00,NT平均病情指数为3.67,显著性分析结果表明OEV7和OEV8的平均病情指数显著低于NT。The results are shown in Figure 5. It can be seen that the resistance of the IbINV transgenic plant OEV line to the black spot disease is significantly improved than that of the wild-type sweet potato plant NT. As shown in Table 8, the average disease index of OEV7 and OEV8 were 0.67 and 1.00 after 15 days of black spot infection, and the average disease index of NT was 3.67. The results of significance analysis showed that the average disease index of OEV7 and OEV8 was significantly lower than that of NT.

表8.OEV株系接种甘薯黑斑病菌15d后的病情指数Table 8. Disease index of OEV strains after inoculation with S. nigricans for 15 days

Figure BDA0002956111790000121
Figure BDA0002956111790000121

上述实验结果表明,IbINV蛋白及其编码基因可以调节植株对甘薯黑斑病菌的抗性。The above experimental results indicated that the IbINV protein and its encoding gene could regulate the resistance of plants to S. zeae.

Claims (1)

1. The application of sweet potato sucrose invertase gene IbINV in sweet potato black spot pathogen resistance, wherein the nucleotide of the sweet potato sucrose invertase gene IbINV is obtained by taking cDNA of Xushu 29 as a template and performing PCR amplification through a primer IbINV _ F and a primer IbINV R;
the primer IbINV F is as follows: ATGGCCGCCACCACTTCTTCCG, respectively;
the primer IbINV R is as follows: TTACAATTGATTGATGAAAGAG are provided.
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