Open Source Algorithms - Page 11

CrystalCMP is a code for comparing crystal structures. It is using two basic approaches for this purpose - the fingerprint and the RMSD approach. Result of the comparison is a similarity matrix and dendrogram. Read more here: J. Appl. Cryst. (2016). 49, 2172-2183 (https://doi.org/10.1107/S1600576716016058) and also here: J. Appl. Cryst. (2020). 53, 841-847 https://doi.org/10.1107/S1600576720003787

DEBay: Deconvolution of Ensemble through Bayes-approach DEBay estimates cell type-specific gene expression by deconvolution of quantitative PCR data of a mixed population. It will be useful in experiments where the segregation of different cell types in a sample is arduous, but the proportion of different cell types in the sample can be measured. DEBay uses the population distribution data and the qPCR data to calculate the relative expression of the target gene in different cell types in the sample. The user manual of DEBay: https://sourceforge.net/projects/debay/files/UserManual.pdf Sample data: https://sourceforge.net/projects/debay/files/Test_data/ Citation Information: Vimalathithan Devaraj, Biplab Bose. DEBay: A computational tool for deconvolution of quantitative PCR data for estimation of cell type-specific gene expression in a mixed population. Heliyon, 2020, 6(7), e04489. https://doi.org/10.1016/j.heliyon.2020.e04489

A simple utility which creates a printable string of data usage. E.g. supply the value 1234567890 and DataUsagePrinter will return the string "1GB 153MB 384KB 722B". Available as binary and source downloads for Java and C#.

DMTA (Distributed Multithreaded Apriori) is a parallel implementation of Apriori algorithm, which exploits the parallelism at the level of threads and processes, seeking to perform load balancing among the cores. Was implemented in C++ language, using the parallelization libraries OpenMP and MPI. The algorithm was generated as a result of a project developed by André Camilo Bolina, under the guidance of teachers Marluce Rodrigues Pereira, Ahmed Ali Abdalla Esmin and Denilson Alves Pereira, in Department of Computer Science at Federal University of Lavras. The results of this project were published in the Revista de Sistemas de Informação da FSMA and is available in http://www.fsma.edu.br/si/edicao11/FSMA_SI_2013_1_Principal_1.html

FM-index is a compressed text index appeared in 2000 (http://pizzachili.dcc.uchile.cl/indexes/FM-indexV2/). A recent algorithm allows to update a FM-index (http://dx.doi.org/10.1016/j.jda.2009.02.007). Here, you'll find the implementation.

EASEA (EAsy Specification of Evolutionary Algorithms: pronounce "easy") is a high-level language dedicated to the specification of evolutionary algorithms. EASEA up to version 0.7 compiles .ez specification files into C++ or JAVA object files.

The EXT Library is set of various useful classes, templates and macros that extend functionality provided by ISO C++ (ext sub-library), standard C and C++ library (lib), to abstract parts of Windows API (win) and access PE file resources (res).

XSWAG (Extended SourceWare Archive Group) is a revival project for the famous SWAG code archives for the Pascal programming language. This project is open to every Pascal/Delphi programmer who wishes to contribute to the global Pascal knowledge base. Current version (testing 0.9) features : - a reader program : allows users to browse through the code archives, organizes them by type and operating system and updates the archives from multiple XSWAG servers. - a server daemon : maintains a list of archives and provides updates to clients. - a creator program : to quickly make or modify an XSWAG archive file, add/remove sources and update sources info (os, compiler, architecture, contact info, author name, subject).

Fuzzy Procedural Content Generation Library (FPCGlib) is a C++ template library for game development. FPCGlib provides a unique combination of fuzzy mathematics and procedural techniques to safely generate content with simulated natural variability.

A project to prevent spam and trackback-links in your guestbook and comments.

FORce based Cluster Editing (FORCE) is a Java software heuristically solving the graph cluster editing problem on weighted edges using BLAST E-values. It further provides a training mode for heuristic parameter estimation.

FunctionalJ is a library which makes it easy to use functional programming patterns in Java, such as representing functions as objects, partial function application, higher-order functions, mapping, folding, and more.

GEP is an evolutionary algorithm for function finding. This framework is a powerful way of expressing and coding genetic-like structures and quickly finding solutions through evolution by common genetic operators.

GeneThello (read jə-ˈne-ˈthe-lō), is an acronym for genetic othello, an othello (reversi) playing program which based on Genetic Algorithm (GA). In principle GeneThello consist of an othello program and a genetic algorithm system.

Cell Broadband Engine Processor optimized libraries and software from Georgia Tech, for a number of libraries for FFT, MPEG, compression, and encryption. This project also includes patches to accelerate R on the Cell Broadband Engine processor.

This project consists of various implementations of the Graphplan algorithm. At the moment we have two implementations of Graphplan: * Emplan - A C++ implementation for Linux, Windows and MacOS X * JavaGP - A Java implementation

Since Microsoft no longer supports Halo: Combat Evolved for PC I can say this Is legal. However it should only be used if you OWN the game! This CD Key generator project hasn't even begun. Pro reverse engineers will be needed.

An IEEE 802.11e EDCA and CFB Simulation Model for ns-2

Java generic API for search algorithms on graphs implicitly given by tree node expansion operator

InnoVB .NET Packager is the easiest deployment tool for VB.NET applications via Inno Setup. It includes all the Application's dependencies even the COM libraries. Great for hybrid application projects. System Requirements: * .NET Framework 2.0 or later * Windows 2000 or later * 256Mb RAM or higher * 1GHz Processor or higher * Inno Setup 5 or higher NOTICE: Visual Basic .NET is a trademark of Microsoft. Inno Setup is a trademark of Jordan Russel. All trademarks are owned by their respective holders.

IterInt is a numerical integration package that implements iterated numerical integration methods. Iterated methods can be used to compute low dimensional (less than ten, for example) integration problems to get very accurate results.

The Jsolution package is a collection of programs, scripts,libraries and documents that i have written and use in my daily life.

Currently, all existing formal tools are designed to serve as formal verifiers, using one implementation or another. JTLV is a new tool aimed to facilitate and provide a unified framework to the development of formal verification algorithms.

Some utility function and/or class to convert date from Gregorian calendar to Jalali (Hejri Shamsi) calendar in PHP, Delphi (and some other in future) with very fast algorithm.

Joshua chess robot: a stepper motor robot interfaced with a photosensible board to play chess with an embedded artificial intelligence, a game database or and internet player. Software, robot photos, tech papers, schematics and cabling included. Enjo