Open Source Algorithms - Page 13

Three software packages to work with RFC2617 digests: libdigest (C library to compute digests), libcppdigest (C++ library to manage /etc/passwd-like files) and libpam-digestfile (PAM module allowing authentication via an /etc/passwd-like file)

Java Framework for automatic transformation of graph structured Process Models (incl. BPMN import) to block structured BPEL code. A graphical tool is provided for visualisation and testing.

API Java de visualisation et d'interaction dans le domaine des graphes.

This software provides an easy graphical way to encrypt your text documents from source code , text files ,scripts even jpeg files .It is a enhanced version of my earlier project https://sourceforge.net/p/xorencrypt which used win32 GUI . This is a demonstration of working of XOR encryption which was used by Germans in World War II (http://en.wikipedia.org/wiki/Lorenz_cipher) . Besides from XOR'ing the message with password after every encryption the key changes pseudorandomly. The password you provide is hashed ( SHA256 ) and saved into the encrypted file to check if the password provided is correct.This algorithm has limitations in general more the numbers of relative characters in the password to plaintext more secure will be the encryption. XOR encrypt has a 3.5 of 5 editors rating from softpedia http://www.softpedia.com/get/Security/Encrypting/XOR-Encrypt.shtml

An implementation of the 'Provider' pattern for .NET 1.1 framework, plug in installation support, and generic entity model base classes capable of binding to a user interface.

A logging framework that exposes a single log api to clients. Applications can configure the implementation, including filtering options using the provider pattern support in the xqs-provider project.

B-tree with a twist pointer set. The ordered set approaches the speed of the fastest unordered, hash table based sets, while using several times less memory.

A light-weight Regular Expression (regex) C library, using double-recursion. (command prompt tester included)

The Flexible Registration and Evaluation Engine (f.r.e.e.) allows the composition, evaluation and optimization of image processing/registration algorithms. It also aims to boost the exchangeability and comparability of data and algorithms in research.

Python functions that Googlers have found useful.

iMet-Q (intelligent Metabolomic Quantitation) is an automated tool with friendly user interfaces for quantifying metabolites in full-scan liquid chromatography-mass spectrometry (LC-MS) data. It has a complete quantitation procedure for noise removal, peak detection and peak alignment. In addition to accurate quantitation, iMet-Q provides the charge states and isotope ratios of detected compounds. It accepts input data in netCDF, mzXML, and mzML format and exports quantitation results in csv and txt format. The software source code is freely available under the license of GPL2.

Libcutils provides a self-contained set of fundamental routines which are essential to basically any Unix utility or daemon application written in C. The library provides fundamental data structures such as lists, hash-maps, strings and parsing functions for JSON or the typical dot-file based configuration data. The following list summarizes the currently supported functionality: * length delimited instead of NULL terminated strings * memory management based on reference counting * several list processing functions like iterators and map-reduce * support of [Ideal Hash Tries](http://infoscience.epfl.ch/record/64398/files/idealhashtrees.pdf) for highly efficient hash map data structures * parsers for [JSON](http://json.org) data and the text configuration files found in Unix system * doubly linked circular lists for reliable event queues * support for test and debugging of memory management problems such as memory leaks

MhcFS2 - engineering calculator. (v. 1.2) (math expression calculator, scientific calculator, numerical, integral,integration, derivative, root, matrix, differencial, differentiation, equation, LSE,ODE )

It software decodes EAN-13 bar code picture by image processing. And a GUI is ship together with it, which can take picture from web camera. So the only thing you need to recognise barcode apart you computer is a webcam.

A base set of libraries. Boilerplate type code and algorithms. Currently skuttil (Java util & parsing code) and searKit (generic Java search framework).

Tpl makes it easy to serialize your C data using just a handful of API functions. The data is stored in its native binary form for maximum efficiency. C, Perl and XML supported. Data is portable across CPU types and OS's from Unix to Mac to Windows.

COPE (Connecting Overlapped Pair-End reads) is a method to align and connect the illumina sequenced Pair-End reads of which the insert size is smaller than the sum of the two read length.The connected reads can be used in genome assembly, resequencing and transcriptome research. The full citation: COPE: An accurate k-mer based pair-end reads connection tool to facilitate genome assembly Binghang Liu; Jianying Yuan; Siu-Ming Yiu; Zhenyu Li; Yinlong Xie; Yanxiang Chen; Yujian Shi; Hao Zhang; Yingrui Li; Tak-Wah Lam; Ruibang Luo Bioinformatics (2012) 28(22): 2870-2874; doi: 10.1093/bioinformatics/bts563

For each Date/Time since 1582-Oct-15 (start Gregorian Calendar): ++ add/sub days&hh:mm:ss - considered all leap years; summer time DST ++ compute start/end of DST ++ compute UTC (Greenwich) to local/DST ++ weekdays ++ Excel compatible date value

GAVS+ (Game Arena Visualization and Synthesis, Plus!) is an open-source tool which enables to visualize a broad spectrum of algorithmic games used in verification and synthesis, and offers a standard interface with utility functions to establish connection with engineering practice. It is developed by Department of Informatics (Unit 6), TU München. The tool is mainly is served for research and educational purposes. The software is released under the GNU General Public License (v3). A slightly outdated tutorial (in PDF) is included in the zip file.

A Java library and set of tools to quickly and easily manipulate graphs (set of nodes and edges) and dynamic graphs. The principal trait of this library is its ability to manage (create, edit, layout, display) continuously evolving graphs. The development of this project now takes place on Github. Visit the official Graphstream website at http://graphstream-project.org

Open Source IM and voice client using Jabber and SIP protocols, with great audio quality thanks to speex and a nice and clean interface. Programmed in Java and C++. It supports chat, voice and file transfers.

MultiBoost is a C++ implementation of the multi-class AdaBoost algorithm. AdaBoost is a powerful meta-learning algorithm commonly used in machine learning. The code is well documented and easy to extend, especially for adding new weak learners.

Multicore SWARM (Software and Algorithms for Running on Multicore Processors) is an open source library for developing efficient and portable implementations that make use of multi-core processors. David A. Bader (Georgia Tech) began SWARM in 1994.

OW.NET -- 1-Wire API port from Java (and J#) to C#. Use the Dallas 1-Wire and iButton chips with standard C# using a serial adapter (also CF.net) or the TMEX drivers on the Windows platform. No J# distribution installation required.

Are Plain Old Java Objects (POJOs) to complex? The aim of this framework is, to convert JavaBeans (complex Java-Object graphs) in a simplified representation (JSON, XML, CSV or other object structures) or handle and control access to JavaBean properties.