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Showing 4 open source projects for "imaris"

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  • 1

    MatLab Analysis of Imaris Data

    MAID allows for the automatic analysis of data extracted from Imaris

    MatLab Analysis of Imaris Data (MAID) allows users to automatically analyse exported statistical information from Imaris (Bitplane) using a variety of modular MatLab designed scripts. The modular design allows users to change and add to the already existing scripts. Currently 3 main classes of functions can be determined, Statistical analysis, Plotting of data, and the concatenation of data.
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  • 2

    Bugs

    SW for HTP analysis of 3D trajectories of microorganisms

    Fortran and shell-level programs originally designed for the analysis of quasi-helical trajectories of Toxoplasma gondii through Matrigel media, acquired by 3D microscopy and digitized by Imaris tracking sw, as published in [TBA]. Key sw components include a singular-value-decomposition (SVD) approach to fitting a modified Fourier series to noisy 3D coordinates measured at irregular time intervals (incorporating cross-validation for determining optimum Fourier order); correction...
    Downloads: 0 This Week
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  • 3
    Commodity class to facilitate interaction between MATLAB and Bitplane Imaris via COM or ICE interface.
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  • 4
    im-browser

    im-browser

    MIB is a high-performance software package for image segmentation

    Microscopy Image Browser (MIB) is a high-performance software package for advanced image processing, segmentation and visualization of multi-dimensional (2D-4D) light and electron microscopy datasets. Home page: http://mib.helsinki.fi
    Downloads: 0 This Week
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