Re: [PyMOL] pseudoatoms and alignment

Björn,

set seq_view, off, object-name

for the pseudoatom object.

As for why they're visible, the sequence viewer has at least two purposes:
(a) showing alignments and (b) providing a convenient linear way of
selecting, zooming, modifying or otherwise transforming atoms that may be
present in the system but not necessarily visible in the 3D viewer.

Cheers,
Warren

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> -----Original Message-----
> From: pym...@li... 
> [mailto:pym...@li...] On Behalf 
> Of Björn Kauppi 
> Sent: Monday, March 31, 2008 5:05 AM
> To: pym...@li...
> Subject: [PyMOL] pseudoatoms and alignment
> 
> Hi
> 
> 
> 
> I use the pseudoatom command to put labels at specific 
> coordinates in space. How can I remove the pseudoatom object 
> show up in the sequence alignment?
> 
> 
> 
> I can not see any reason pseudoatoms should be in the alignment or?
> 
> 
> 
> Björn
> 
> 
> 
> 
> 
> 
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