Re: [PyMOL] store/recall stick_transparency in scene?

Thanks.

On 05/20/11 11:13, Jason Vertrees wrote:
> Hi Nick,
> 
> This is something Robert Campbell alluded to a few days ago.  To get
> what you want, the "python block" and "mdo" are you friends:
> 
> # create an ala fragment and setup the view
> 
> frag ala
> as sticks
> orient
> 
> # 60-frame movie
> 
> mset 1x60
> 
> # start a Python block that fades out the fragment
> 
> python
> for x in range(60):
>   cmd.mdo(x, "set_bond stick_transparency, %f, ala" % (x/60.))
> python end
> 
> # play the movie
> 
> mplay
> 
> See:
> * -- http://www.pymolwiki.org/index.php/Mdo
> * -- http://www.pymolwiki.org/index.php/Python
> 
> Cheers,
> 
> -- Jason
> 
> 
> On Fri, May 20, 2011 at 12:54 PM, Nicolas Bock <nic...@gm...> wrote:
>> When I do the following
>>
>> hide all
>> show sticks, all
>> scene 001, store
>>
>> set_bond stick_transparency, 0.5, all
>> scene 002, store
>>
>> scene 001
>>
>> the stick_transparency setting is not restored. I was hoping I could use
>> scenes to slowly fade out a part of a molecule by adding several scenes
>> with increasing stick_transparency values.
>>
>> Thanks, nick
>>
>>
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> 
> 
>