Re: [PyMOL] RMSD between two structures

One should emphasize that this alignment is a *sequence* alignment in 
case of the "align" command.

Cheers,
   Thomas

On 11/30/2011 11:19 AM, Tsjerk Wassenaar wrote:
> Hi Martin,
>
> It does an alignment, finding matching pairs of atoms, removing
> outliers and calculating the RMSD over the remaining matches.
>
> Cheers,
>
> Tsjerk
>
> On Wed, Nov 30, 2011 at 11:05 AM, Martin Hediger<ma...@bl...>  wrote:
>> How does PyMOL calculate the RMSD between two structures where the
>> number of atoms is different?
>> Martin

-- 
Thomas Holder
MPI for Developmental Biology
Spemannstr. 35
D-72076 Tübingen