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From: Mike M. <mar...@ho...> - 2012-11-27 22:06:24
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---------------------------------------- > From: jas...@sc... > Date: Tue, 27 Nov 2012 12:37:41 -0600 > Subject: Re: [PyMOL] was: Mobile PyMOL Problem and Solution/ Now: pdb or related libraries > To: mar...@ho... > CC: pym...@li... > > Mike, > > > Although I am curious now if I had a pdb that lacks hydrogens, like I did in this case, > > what pymol facilities are there for adding them? Apparently you have some editing > > h_add object_name > > Type, "help h_add" or check out h_add on the PyMOLWiki > (http://www.pymolwiki.org/index.php/H_Add). Thanks, applying to the pdb I had seems to have worked but it didn't think much of the double bonds and added extra's but presumably I can delete and rotate more easily than adding all them manually. > > Cheers, > > -- Jason > > -- > Jason Vertrees, PhD > Director of Core Modeling Product Management > Schrödinger, Inc. > > (e) Jas...@sc... > (o) +1 (603) 374-7120 |