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From: Abhinav K. <abh...@sl...> - 2014-05-21 16:08:55
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Thanks Clotilde again. I switched the graphics card driver and it has fixed the problem. The switch I made was from Nouveau display driver to Nvidia dreiver. Thanks, Abhinav ______________________________________ Abhinav Kumar, Ph.D. The Joint Center for Structural Genomics MS99, SLAC National Accelerator Laboratory 2575 Sand Hill Rd, Menlo Park, CA 94025 (650) 926-2992 On 05/21/2014 08:44 AM, Clotilde LowKam wrote: > Hello, > probably a driver/graphic card problem. Maybe trying the legacy driver > for your card could help. > Clotilde > > > 2014-05-21 11:26 GMT-04:00 Abhinav Kumar <abh...@sl... > <mailto:abh...@sl...>>: > > Hi, > > I installed pymol ( pymol-v1.7.0.5-Linux-x86_64.tar.bz2) on my > ubuntu (12.04 LTS) desktop and this was working fine. > Later, I upgraded my Ubuntu to 14.04 LTS and now pymol has become > extremely sluggish. Even rotating a small molecule like ATP takes > a while. > > Any suggestions on how to fix this? > > Coot and rasmol are not affected by this Ubuntu upgrade. > > Thanks, > Abhinav > ______________________________________ > Abhinav Kumar, Ph.D. > The Joint Center for Structural Genomics > MS99, SLAC National Accelerator Laboratory > 2575 Sand Hill Rd, Menlo Park, CA 94025 > (650) 926-2992 <tel:%28650%29%20926-2992> > > > On 05/13/2014 10:43 AM, Thomas Holder wrote: >> Greetings, >> >> We'd like to announce the release of Incentive PyMOL 1.7.0.5, which is a bugfix release. Applicable bugfixes have also been pushed to the sourceforge SVN repository as Open-Source PyMOL 1.7.1.3 (SVN rev 4076). >> >> Fixed bugs include: >> >> Incentive PyMOL (for licensed users): >> - don't disable all shaders if geometry shaders are not available >> - many z-depth issues for labels and connectors in immediate, shader, and >> ray tracing (all renderings should now look almost exactly the same) >> - background in front of text with use_shaders=0 >> - label picking broken with use_shaders=0 >> - character rendering in ray tracing >> - clipped text in multi-line labels (shader on and off) >> >> Open Source and Incentive PyMOL: >> - cartoon memory leak >> - CGO colors ignored with ALPHA >> - hidden groups flash in scene based movies >> - "A > find > polar contact > just intra-side chain" broken >> - "scene auto, update" broken >> - small solvent_radius crashes Surface generation >> - grid_mode support for volumes >> >> Some of these changes have been in the SVN repository for a couple of weeks. >> >> Download: >> Installers for Incentive PyMOL:http://pymol.org/dsc/ip/ >> Open Source:http://sourceforge.net/p/pymol/ >> >> Cheers, >> The PyMOL Team at Schrödinger >> > > > ------------------------------------------------------------------------------ > "Accelerate Dev Cycles with Automated Cross-Browser Testing - For FREE > Instantly run your Selenium tests across 300+ browser/OS combos. > Get unparalleled scalability from the best Selenium testing > platform available > Simple to use. Nothing to install. Get started now for free." > http://p.sf.net/sfu/SauceLabs > _______________________________________________ > PyMOL-users mailing list (PyM...@li... > <mailto:PyM...@li...>) > Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users > Archives: > http://www.mail-archive.com/pym...@li... > > |