From: Clavel <dc...@ib...> - 2014-11-28 15:41:43
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Hello PyMOL users, I am currently puzzled by the CONECT card and the display of multi-states. After, many trials I cannot end up with a correct representation of my work. I loaded 9 states to PyMOL made of 2 different PDB files. The second files of each states contains specific CONECT cards according to the index number of each atoms (inter residue connection). When I run my script, Pymol is working nicely except for the CONECT cards... Basically, PyMOL only put in memory the CONECT card of the second files of the first state and apply it to the rest of the states. In addition, I tried pdb_ignore_connect and connect_mode... Despites their fancy names those commands were useless. Does someone knows how to force PyMol to read stricly PDB files when loading multi-states? Many thanks. -- *Damien CLAVEL* PhD student at Laboratoire Chimie Physique (UP Sud) and Institut de Biologie Structurale (EPN Campus) -------------------------------------------------------------------------- Laboratoire de Chimie Physique <" rel="nofollow">http://www.lcp.u-psud.fr/rubrique.php3?id_rubrique=266/> Institut de Biologie Structurale <" rel="nofollow">http://www.ibs.fr/spip.php?lang=en> Bul. 350 Campus Orsay EPN Campus 15, Av. Jean Perrin 6, rue Jules Horowitz F-91405 ORSAY Cedex F-38000 GRENOBLE Image and video hosting by TinyPic <" rel="nofollow">http://tinypic.com?ref=28s7yvd> |