Re: [PyMOL] How to convert .mae files to .PDB

Hi Himesh,

On the PyMOL command line, this should do the trick:

# load desmond trajectory
load      sample-out.cms, mytraj
load_traj sample_trj/clickme.dtr, mytraj

# save multi-model PDB file
save multi.pdb, mytraj, state=0

See also:
https://pymolwiki.org/index.php/Load_Traj#Examples
https://pymolwiki.org/index.php/Save

Cheers,
  Thomas

On 25 Jan 2017, at 03:46, Himesh Makala <hi...@sa...> wrote:

> Hello, 
> 
> I would like to convert the simulation output [which was performed by using Desmond (maestro)] into .PDB format. It will be very helpful if anyone help me out with the same.
> 
> Thanks a lot,
> 
> Himesh
> 
> -- 
> 
> Thanks & Regards,
> 
> Himesh Makala

-- 
Thomas Holder
PyMOL Principal Developer
Schrödinger, Inc.