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From: João M. D. <jm...@it...> - 2017-03-17 15:08:57
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Dear all, I started experiencing segmentation fault on a pymol that I had installed through the omnia channel on conda. Then, I decided to install from scratch using this recipe: https://pymolwiki.org/index.php/Linux_Install#Get_latest_source_from_SVN Still getting the segmentation fault, so maybe something changed in my system and it's conflicting with? The segmentation fault is not on launching PyMOL, but rather when I do stuff: loading a PDB file, building a fragment. Like this: ``` ./pymol: line 3: 28505 Segmentation fault "/usr/bin/python2.7" "/data/joao/maindisk/software/pymol-svn/modules/pymol/__init__.py" "$@" ``` Curiously, when I load a 1.740 session (.pse file I had saved), it works (no segmentation fault), I can even perform commands like select and stuff, and they work. If I load a more recent 1.803 session, it also seg faults: ``` Executive: Loading version 1.803 session... ./pymol: line 3: 29221 Segmentation fault "/usr/bin/python2.7" "/data/joao/maindisk/software/pymol-svn/modules/pymol/__init__.py" "$@" ``` Any clues? Am I doing something wrong? Thanks, João -- João M. Damas PhD Student Protein Modelling Group ITQB-UNL, Oeiras, Portugal Tel:+351-214469613 |