RE: [PyMOL] mesh question

Stephen,

	Sorry, the mesh representation right now is limited to rendering
a Cartesian box.  The selection controls the size of the box, but all
atoms within the box are currently always shown.  I will look into
changing this so that the mesh performs more like the other
representations.

Cheers,
Warren

--
mailto:wa...@de...
Warren L. DeLano, Ph.D.
Principal Scientist
DeLano Scientific LLC
Voice (650)-346-1154 
Fax   (650)-593-4020

> -----Original Message-----
> From: pym...@li... [mailto:pymol-users- 
> ad...@li...] On Behalf Of Soisson, Stephen Michael
> Sent: Friday, July 18, 2003 3:27 AM
> To: 'pym...@li...'
> Subject: [PyMOL] mesh question
> 
> Hi everyone-
> 
> I have two interacting monomers, and have selected the contacting 
> resides between them and drawn a solid surface around these selected 
> residues on one monomer.  This worked fine and I had no problem.
> 
> I would now like to draw a mesh surface around the remaining residues 
> in the monomer, that is, everything but the contacting residues.  No 
> matter what selection scheme I try to use, the mesh is always drawn 
> around the entire molecule.
> 
> For instance:
> 
> select contacts=(byres monA and (monB around 4))
> show surface, contacts
> 
> show mesh, (monA and (!contacts)) ****mesh is still drawn around whole

> molecule
> 
> However, the following command does work to color just the mesh 
> surface that is not in contact with the other monomer:
> 
> color grey70, (monA and (!contacts))
> 
> which leads me to believe that my syntax is correct for the selection.
> 
> What am I missing?  Is there a way to just show the mesh over a 
> certain portion of a molecule?
> 
> Many thanks in advance-
> 
> Steve
> 
> ----------------------------------------------------------------------
> ----
> --
> --
> Stephen M. Soisson, Ph.D.
> Senior Research Biochemist
> X-ray Crystallography / Dept. of Medicinal Chemistry
> Merck Research Laboratories
> P.O. Box 2000, RY50-105
> Rahway, NJ  07065
> Phone: 	(732) 594-4349
> Fax:	(732) 594-5042
> ste...@me...
> 
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