[go: up one dir, main page]

  • Join/Login
  • Business Software
  • Open Source Software
  • For Vendors
  • Blog
  • About
  • More
    • Articles
    • Create
    • SourceForge Podcast
    • Site Documentation
    • Subscribe to our Newsletter
    • Support Request
SourceForge logo
For Vendors Help Create Join Login
SourceForge logo
Business Software
Open Source Software
SourceForge Podcast
Resources
  • Articles
  • Case Studies
  • Blog
Menu
  • Help
  • Create
  • Join
  • Login
  • Home
  • Open Source Software
  • Scientific/Engineering
  • Bio-Informatics
  • SAM tools
  • Files

SAM tools Files

Brought to you by: awhitwham, bhandsaker, daviesrob, jenniferliddle, and 5 others
  • Summary
  • Files
  • Reviews
  • Support
  • Mailing Lists
  • Code

The interactive file manager requires Javascript. Please enable it or use sftp or scp.
You may still browse the files here.

Download Latest Version samtools-1.22.1.tar.bz2 (9.3 MB)
Email in envelope

Get an email when there's a new version of SAM tools

Next
Home
Name Modified Size InfoDownloads / Week
samtools 2025-07-14
350 350 weekly downloads
tabix 2021-08-10
361 361 weekly downloads
glftools 2009-05-08
0
Totals: 3 Items   711
You Might Also Like
Relax: PRTG Monitors Your IT for You Icon
Relax: PRTG Monitors Your IT for You

Stay in control and avoid IT headaches. PRTG monitors your network, devices, and apps - receive alerts when it matters most.

You’re the go-to IT person, always putting out fires and keeping things running. With PRTG, you get reliable alerts to monitor your entire IT infrastructure, without the noise. Our intuitive setup gives you a clear overview of your network, devices, and applications in real time. Get instant alerts only when something needs your attention, whether you’re at your desk or on the move. Spend less time worrying about outages and more time focusing on what matters. Set up PRTG once and let it work for you - PRTG has you covered.
Start Your Free PRTG Trial Now
MongoDB Atlas runs apps anywhere Icon
MongoDB Atlas runs apps anywhere

Deploy in 115+ regions with the modern database for every enterprise.

MongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.
Learn More
Recommended Projects
  • Hadoop-BAM
    Hadoop-BAM is a Java library for the manipulation of files in common bioinformatics formats using the Hadoop MapReduce framework with the Picard SAM JDK, and command line tools similar to SAMtools. The file formats currently supported are BAM, SAM, FASTQ, FASTA, QSEQ, BCF, and VCF. For a...
  • sam_comp
    This is a simple arithmetic coding based compressor for the SAM and BAM (DNA sequence alignment) file format.
  • NeedlemanWunsch
    NeedlemanWunsch
    MOVED TO GITHUB: https://github.com/noporpoise/seq-align Global optimal sequence alignment using the Needleman-Wunsch algorithm. Aligns DNA, RNA, protein sequence and more! See our sister project local alignment using Smith-Waterman: http://sourceforge.net/projects/smithwaterman/
  • MView
    NOTE: The MView repository and web pages have moved to: https://github.com/desmid/mview https://desmid.github.io/mview/ Release tarballs will continue to be uploaded to SourceForge. ---- MView is a command line utility that extracts and reformats the results of a sequence...
  • picard
    A set of tools (in Java) for working with next generation sequencing data in the SAM/BAM format. Note that development has moved to GitHub at https://github.com/broadinstitute/picard and support is available on the GATK forum at http://gatkforums.broadinstitute.org/categories/ask-the-team
SourceForge
  • Create a Project
  • Open Source Software
  • Business Software
  • Top Downloaded Projects
Company
  • About
  • Team
  • SourceForge Headquarters
    1320 Columbia Street Suite 310
    San Diego, CA 92101
    +1 (858) 422-6466
Resources
  • Support
  • Site Documentation
  • Site Status
  • SourceForge Reviews
SourceForge logo
© 2025 Slashdot Media. All Rights Reserved.
Terms Privacy Privacy Choices Advertise
Thanks for helping keep SourceForge clean.
X

Briefly describe the problem (required):
Upload screenshot of ad (required):
Select a file, or drag & drop file here.
✔
✘
Screenshot instructions:

Click URL instructions:
Right-click on the ad, choose "Copy Link", then paste here →
(This may not be possible with some types of ads)

More information about our ad policies

Ad destination/click URL: