TABSAT - Targeted Amplicon Bisulfite Sequencing Analysis Tool
A tool for analyzing targeted bisulfite sequencing data generated on an Ion Torrent PGM / Illumina MiSeq. The workflow starts with raw sequencing data, performs quality assessment, and uses a tailored version of Bismark to map the reads to a reference genome. Results are aggregated across all samples, presented in table format, and visualized as lollipop plots. In addition, due to the long read length of Ion Torrent reads, the pipeline is able to deduce specific methylation-patterns present in a sample.
Please check out the Github page:
https://github.com/tadkeys/tabsat
Features
- Bisulfite Sequencing
- Data Analysis
- NGS
- Ion Torrent PGM
- MiSeq
- Methylation
Follow TABSAT
You Might Also Like
All-in-One IT Monitoring - No More Blind Spots
Tired of switching between different tools and missing critical alerts? PRTG brings everything together, monitoring your entire IT infrastructure from a single, intuitive interface. Whether it’s servers, switches, printers, or cloud services, you get instant visibility and clear notifications - no technical jargon, no clutter. Set up in minutes, PRTG helps you prevent downtime, reduce stress, and prove your value to your company. Focus on your job, not on chasing issues. Try PRTG and experience true IT peace of mind.
Rate This Project
Login To Rate This Project
User Reviews
Be the first to post a review of TABSAT!